Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato

Detalhes bibliográficos
Ano de defesa: 2010
Autor(a) principal: Ara?jo, Osm?rio Jos? Lima de lattes
Orientador(a): Souza, Sonia Regina de lattes
Banca de defesa: Cabral, Luiz Mors, Mauad, Munir
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal Rural do Rio de Janeiro
Programa de Pós-Graduação: Programa de P?s-Gradua??o em Agronomia - Ci?ncia do Solo
Departamento: Instituto de Agronomia
País: Brasil
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: https://tede.ufrrj.br/jspui/handle/jspui/3863
Resumo: The largest efficiency of N uptake from low concentrations in the solution, and the capacity of accumulation of this nutrient could propitiate a larger stock of N in the vegetative period, which during the grains development would be the responsible for the largest protein in the grains of the traditional rice (Oryza sativa) varieties. Thus, in this study, to identify the metabolic mechanisms responsible for this efficiency 56 traditional rice varieties and 10 improved varieties were compared for their genetic similarities, using the RADP technique. Among the two main groups obtained, the contrasting varieties IAC-47, Bico Ganga and Revenda were selected to represent the Group I, and Manteiga for Group II. It was also considered the crude proteins content of the grains. The varieties were evaluated for the kinetic parameters of absorption of nitrate and kinetics of expression of the genes that codify high affinity nitrate transporters. The genetic similarity resulted in two great groups: Group I and Group II. The group I was shown to be quite heterogeneous as for the origin of the analyzed varieties. All of the improved varieties were contained in the Group I. Most of the varieties named Lageado, originated from the germoplasm bank were in the Group I. The group II contained exclusively varieties form farms in the State of Maranh?o, what suggests a narrow genetic base of the varieties. The rice varieties with thinnest and longest grains (with larger relationship length width ? L/W) were in the Group I, while in the Group II they were more rounded, in other words, with the smallest relationships L/W. The varieties Revenda and Manteiga presented larger expression of high affinity transporters OsNRT2.1 and 2.2, in all times. When compared the kinetics of absorption of nitrate with the expression of the transporters it was observed that the variety IAC-47 presented the smallest Vm?x, and that there was not great increase of the expression of NRT2.1. the variety IAC-47, despite of belonging to the same grouping of genetic similarity of the variety Revenda and both with similar size of grain and length/width ratios, presented only 65% of genetic similarity. Therefore the results showed that the rice variety Revenda has mechanisms that propitiate larger capacity of nitrate absorption when it is available to the plant.
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spelling Souza, Sonia Regina de003.927.487-03http://lattes.cnpq.br/3312117357555510Fernandes, Manlio SilvestreCabral, Luiz MorsMauad, Munir927.592.701-49http://lattes.cnpq.br/5657906829078107Ara?jo, Osm?rio Jos? Lima de2020-09-11T09:52:53Z2010-02-24Ara?jo, Osm?rio Jos? Lima de. Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato. 2010. 44 f. Disserta??o (Programa de P?s-Gradua??o em Agronomia - Ci?ncia do Solo) - Universidade Federal Rural do Rio de Janeiro, Serop?dica.https://tede.ufrrj.br/jspui/handle/jspui/3863The largest efficiency of N uptake from low concentrations in the solution, and the capacity of accumulation of this nutrient could propitiate a larger stock of N in the vegetative period, which during the grains development would be the responsible for the largest protein in the grains of the traditional rice (Oryza sativa) varieties. Thus, in this study, to identify the metabolic mechanisms responsible for this efficiency 56 traditional rice varieties and 10 improved varieties were compared for their genetic similarities, using the RADP technique. Among the two main groups obtained, the contrasting varieties IAC-47, Bico Ganga and Revenda were selected to represent the Group I, and Manteiga for Group II. It was also considered the crude proteins content of the grains. The varieties were evaluated for the kinetic parameters of absorption of nitrate and kinetics of expression of the genes that codify high affinity nitrate transporters. The genetic similarity resulted in two great groups: Group I and Group II. The group I was shown to be quite heterogeneous as for the origin of the analyzed varieties. All of the improved varieties were contained in the Group I. Most of the varieties named Lageado, originated from the germoplasm bank were in the Group I. The group II contained exclusively varieties form farms in the State of Maranh?o, what suggests a narrow genetic base of the varieties. The rice varieties with thinnest and longest grains (with larger relationship length width ? L/W) were in the Group I, while in the Group II they were more rounded, in other words, with the smallest relationships L/W. The varieties Revenda and Manteiga presented larger expression of high affinity transporters OsNRT2.1 and 2.2, in all times. When compared the kinetics of absorption of nitrate with the expression of the transporters it was observed that the variety IAC-47 presented the smallest Vm?x, and that there was not great increase of the expression of NRT2.1. the variety IAC-47, despite of belonging to the same grouping of genetic similarity of the variety Revenda and both with similar size of grain and length/width ratios, presented only 65% of genetic similarity. Therefore the results showed that the rice variety Revenda has mechanisms that propitiate larger capacity of nitrate absorption when it is available to the plant.A maior efici?ncia de absor??o de N a partir de baixas concentra??es na solu??o externa, e a capacidade de ac?mulo desse nutriente poderia propiciar um maior estoque de N no per?odo vegetativo, que durante o enchimento dos gr?os seria o respons?vel pelo maior teor de prote?na nos gr?os das variedades locais de arroz (Oryza sativa). Desta forma, neste projeto para se identificar os mecanismos metab?licos respons?veis por esta efici?ncia inicialmente foram comparadas 56 variedades locais de arroz e 10 variedades melhoradas quanto a suas similaridades gen?ticas utilizando-se a t?cnica de RAPD. Entre os dois principais agrupamentos obtidos foram selecionadas as variedades contrastantes IAC-47, Bico Ganga e Revenda do Grupo I e Manteiga do Grupo II, levando-se em considera??o tamb?m os teores de prote?na bruta dos gr?os. As variedades foram avaliadas quanto aos par?metros cin?ticos de absor??o de nitrato e quanto ? cin?tica de express?o dos genes que codificam os transportadores nitrato de alta afinidade. O dendrograma de similaridade gen?tica apresentou dois grandes grupos: Grupo I e Grupo II. O grupo I se mostrou bastante heterog?neo quanto ? origem das variedades analisadas. Todas as variedades melhoradas agruparam no Grupo I. A maior parte das variedades de nome Lajeado provenientes de banco germoplasma esta no grupo I. O grupo II agrupou exclusivamente variedades provenientes das lavouras do estado do Maranh?o, o que sugere uma estreita base gen?tica das variedades l? cultivadas. Os gr?os mais finos e longos (com maior rela??o comprimento largura ? C/L) estavam nas variedades de arroz no Grupo I, enquanto no Grupo II os gr?os de arroz foram mais redondos, ou seja, com as menores rela??es C/L. As variedades Revenda e Manteiga apresentaram maior express?o dos transportadores de alta afinidade OsNRT2.1 e 2.2, em todos os tempos. Ao se comparar a cin?tica de absor??o de nitrato com a express?o dos transportadores foi observado que a variedade IAC-47 apresenta a menor Vm?x, e que n?o houve grande aumento da express?o do NRT2.1. A variedade IAC-47, apesar de pertencer ao mesmo agrupamento de similaridade gen?tica da variedade Revenda e terem ambas, tamanhos de gr?os e rela??es comprimento largura semelhantes, apresentaram apenas 65% de similaridade gen?tica. Portanto os resultados obtidos mostram que a variedade de arroz Revenda possui mecanismos que propiciam maior capacidade de absor??o de nitrato, quando ele est? dispon?vel para a planta.Submitted by Sandra Pereira (srpereira@ufrrj.br) on 2020-09-11T09:52:53Z No. of bitstreams: 1 2010 - Osm?rio Jos? Lima de Ara?jo.pdf: 1678228 bytes, checksum: c8b81f8e51deb4db3524c8af60900c9b (MD5)Made available in DSpace on 2020-09-11T09:52:53Z (GMT). No. of bitstreams: 1 2010 - Osm?rio Jos? Lima de Ara?jo.pdf: 1678228 bytes, checksum: c8b81f8e51deb4db3524c8af60900c9b (MD5) Previous issue date: 2010-02-24Coordena??o de Aperfei?oamento de Pessoal de N?vel Superior, CAPES, Brasil.application/pdfhttps://tede.ufrrj.br/retrieve/61850/2010%20-%20Osm%c3%a1rio%20Jos%c3%a9%20Lima%20de%20Ara%c3%bajo.pdf.jpgporUniversidade Federal Rural do Rio de JaneiroPrograma de P?s-Gradua??o em Agronomia - Ci?ncia do SoloUFRRJBrasilInstituto de AgronomiaARAKI R, HASEGAWA, H. Expression of rice (Oryza sativa L.) genes involved in highaffinity nitrate transport during the period of nitrate induction. Breeding Science, v.56, p.295- 302, 2006. ARA?JO, E. S.; SOUZA, S. R.; FERNANDES, M. S. Caracter?sticas morfol?gicas e moleculares e ac?mulo de prote?na em gr?os de variedades de arroz do Maranh?o. 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The Plant Journal, v.17, n.15, p.563-568, 1999.Oryza sativaExpress?o g?nicaAbsor??o de nitratoOryza sativaGene expressionNitrate uptakeAgronomiaSimilaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitratoGenetic similarity in rice varieties using RAPD and evaluation of the absorption and expression kinetics of nitrate transportersinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UFRRJinstname:Universidade Federal Rural do Rio de Janeiro (UFRRJ)instacron:UFRRJTHUMBNAIL2010 - Osm?rio Jos? Lima de Ara?jo.pdf.jpg2010 - Osm?rio Jos? Lima de Ara?jo.pdf.jpgimage/jpeg4460http://localhost:8080/tede/bitstream/jspui/3863/4/2010+-+Osm%C3%A1rio+Jos%C3%A9+Lima+de+Ara%C3%BAjo.pdf.jpg8913ac5f7069a9b19d5a1d88bd445c29MD54TEXT2010 - Osm?rio Jos? Lima de Ara?jo.pdf.txt2010 - Osm?rio Jos? 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dc.title.por.fl_str_mv Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato
dc.title.alternative.eng.fl_str_mv Genetic similarity in rice varieties using RAPD and evaluation of the absorption and expression kinetics of nitrate transporters
title Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato
spellingShingle Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato
Ara?jo, Osm?rio Jos? Lima de
Oryza sativa
Express?o g?nica
Absor??o de nitrato
Oryza sativa
Gene expression
Nitrate uptake
Agronomia
title_short Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato
title_full Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato
title_fullStr Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato
title_full_unstemmed Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato
title_sort Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato
author Ara?jo, Osm?rio Jos? Lima de
author_facet Ara?jo, Osm?rio Jos? Lima de
author_role author
dc.contributor.advisor1.fl_str_mv Souza, Sonia Regina de
dc.contributor.advisor1ID.fl_str_mv 003.927.487-03
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/3312117357555510
dc.contributor.advisor-co1.fl_str_mv Fernandes, Manlio Silvestre
dc.contributor.referee1.fl_str_mv Cabral, Luiz Mors
dc.contributor.referee2.fl_str_mv Mauad, Munir
dc.contributor.authorID.fl_str_mv 927.592.701-49
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/5657906829078107
dc.contributor.author.fl_str_mv Ara?jo, Osm?rio Jos? Lima de
contributor_str_mv Souza, Sonia Regina de
Fernandes, Manlio Silvestre
Cabral, Luiz Mors
Mauad, Munir
dc.subject.por.fl_str_mv Oryza sativa
Express?o g?nica
Absor??o de nitrato
topic Oryza sativa
Express?o g?nica
Absor??o de nitrato
Oryza sativa
Gene expression
Nitrate uptake
Agronomia
dc.subject.eng.fl_str_mv Oryza sativa
Gene expression
Nitrate uptake
dc.subject.cnpq.fl_str_mv Agronomia
description The largest efficiency of N uptake from low concentrations in the solution, and the capacity of accumulation of this nutrient could propitiate a larger stock of N in the vegetative period, which during the grains development would be the responsible for the largest protein in the grains of the traditional rice (Oryza sativa) varieties. Thus, in this study, to identify the metabolic mechanisms responsible for this efficiency 56 traditional rice varieties and 10 improved varieties were compared for their genetic similarities, using the RADP technique. Among the two main groups obtained, the contrasting varieties IAC-47, Bico Ganga and Revenda were selected to represent the Group I, and Manteiga for Group II. It was also considered the crude proteins content of the grains. The varieties were evaluated for the kinetic parameters of absorption of nitrate and kinetics of expression of the genes that codify high affinity nitrate transporters. The genetic similarity resulted in two great groups: Group I and Group II. The group I was shown to be quite heterogeneous as for the origin of the analyzed varieties. All of the improved varieties were contained in the Group I. Most of the varieties named Lageado, originated from the germoplasm bank were in the Group I. The group II contained exclusively varieties form farms in the State of Maranh?o, what suggests a narrow genetic base of the varieties. The rice varieties with thinnest and longest grains (with larger relationship length width ? L/W) were in the Group I, while in the Group II they were more rounded, in other words, with the smallest relationships L/W. The varieties Revenda and Manteiga presented larger expression of high affinity transporters OsNRT2.1 and 2.2, in all times. When compared the kinetics of absorption of nitrate with the expression of the transporters it was observed that the variety IAC-47 presented the smallest Vm?x, and that there was not great increase of the expression of NRT2.1. the variety IAC-47, despite of belonging to the same grouping of genetic similarity of the variety Revenda and both with similar size of grain and length/width ratios, presented only 65% of genetic similarity. Therefore the results showed that the rice variety Revenda has mechanisms that propitiate larger capacity of nitrate absorption when it is available to the plant.
publishDate 2010
dc.date.issued.fl_str_mv 2010-02-24
dc.date.accessioned.fl_str_mv 2020-09-11T09:52:53Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv Ara?jo, Osm?rio Jos? Lima de. Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato. 2010. 44 f. Disserta??o (Programa de P?s-Gradua??o em Agronomia - Ci?ncia do Solo) - Universidade Federal Rural do Rio de Janeiro, Serop?dica.
dc.identifier.uri.fl_str_mv https://tede.ufrrj.br/jspui/handle/jspui/3863
identifier_str_mv Ara?jo, Osm?rio Jos? Lima de. Similaridade gen?tica entre variedades de arroz utilizando RAPD e avalia??o da cin?tica de absor??o e de express?o de transportadores de nitrato. 2010. 44 f. Disserta??o (Programa de P?s-Gradua??o em Agronomia - Ci?ncia do Solo) - Universidade Federal Rural do Rio de Janeiro, Serop?dica.
url https://tede.ufrrj.br/jspui/handle/jspui/3863
dc.language.iso.fl_str_mv por
language por
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