Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos

Detalhes bibliográficos
Ano de defesa: 2017
Autor(a) principal: Ferreira, Leonardo lattes
Orientador(a): Soares, Maria Am?lia Menck lattes
Banca de defesa: Soares, Maria Am?lia Menck, Gasparino, Eliane, Ara?jo, Jean Luiz Sim?es, Silva, Heriberto Dias da, Ribeiro, Marina Mortati Dias
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal Rural do Rio de Janeiro
Programa de Pós-Graduação: Programa de P?s-Gradua??o em Zootecnia
Departamento: Instituto de Zootecnia
País: Brasil
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: https://tede.ufrrj.br/jspui/handle/jspui/4584
Resumo: In Brazil, as part of the goat milk produced is destined to the dairy industry, the evaluation of quality parameters, such as protein and fat content, is of great importance. Generally, breeding programs that aim an increase in milk quality, are based only on phenotype measurements, however, this process can be improved with the use of molecular markers. To search for new markers of this type in Saanem and Alpine goats, with this study we aimed to evaluate the association of polymorphisms in the UCP2, LPL, SCD and PPARG genes with dairy goats genetic value for milk production and quality characteristics. We also aimed to evaluate if polymorphisms described in the PPARG, UCP2 and GPAT4 genes results in alterations in its expression in milk mammary gland epithelial cells and if this expression changes during lactation. To search for polymorphisms, fragments of the UCP2, LPL, SCD and PPARG genes were amplified by the PCR technique and submitted to electrophoresis, sequencing and PCR-RFLP. After the identification and characterization of the polymorphisms, approximately 180 animals were genotyped for the polymorphisms found in the UCP2 and PPARG genes and the genetic values of these animals were estimated from milk production and composition data using the univariate model. The evaluation of the association of these polymorphisms with the genetic value of the animals was performed through analysis of variance followed by Tukey test with significance level of 5%. In order to evaluate whether polymorphisms in the PPARG, UCP2 and GPAT4 genes affect its expression in milk mammary gland epithelial cells and if its expression varies during lactation, collections of these cell types were performed in 50 Alpine animals at 35 days post-partum, and in 20 of these animals, samples were also collected at 10, 50 and 140 days post-partum. As RNA degradation occurred in these samples, it was not possible to perform the gene expression analyzes in this material, so we chose to use this primers to evaluate the expression of these genes in cDNA samples of Longissimus lumborum muscle from another experiment of this same team. In this experiment, it was also evaluated whether the expression of these genes correlates with the slaughter weight, carcass weight and shear force characteristics. This correlation was assessed using the Pearson correlation test followed by the T-test. Polymorphisms were identified in the PPARG, UCP2 and LPL genes. The polymorphism identified in the PPARG gene was associated with the genetic value of the animals for total milk production, fat production, protein production, dry extract production and lactose production. In the UCP2 gene, two polymorphisms, ?3708G/A and ?2569G/A, are associated with the genetic value of the animals for percentages of fat, protein and dry extract. In the Longissimus lumborum muscle, the expression of the PPARG gene showed a positive correlation with the expression of the GPAT4 gene. From these results, it can be concluded that, potential molecular markers for milk production and quality were identified, that the methodology used for collection and storage of milk mammary gland epithelial cells is not suitable for subsequent gene expression analysis and that the GPAT4 gene is a probable PPAR-? target gene in the caprine longisimus lumborum muscle.
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spelling Soares, Maria Am?lia Menck487.620.079-91http://lattes.cnpq.br/9850186052133290Soares, Maria Am?lia MenckGasparino, ElianeAra?jo, Jean Luiz Sim?esSilva, Heriberto Dias daRibeiro, Marina Mortati Dias066.432.169-07http://lattes.cnpq.br/1560720950612972Ferreira, Leonardo2021-04-29T13:53:58Z2017-12-15FERREIRA, Leonardo. Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos. 2017. 64 f. Tese (Doutorado em Zootecnia) - Instituto de Zootecnia, Universidade Federal Rural do Rio de Janeiro, Serop?dica, RJ, 2017.https://tede.ufrrj.br/jspui/handle/jspui/4584In Brazil, as part of the goat milk produced is destined to the dairy industry, the evaluation of quality parameters, such as protein and fat content, is of great importance. Generally, breeding programs that aim an increase in milk quality, are based only on phenotype measurements, however, this process can be improved with the use of molecular markers. To search for new markers of this type in Saanem and Alpine goats, with this study we aimed to evaluate the association of polymorphisms in the UCP2, LPL, SCD and PPARG genes with dairy goats genetic value for milk production and quality characteristics. We also aimed to evaluate if polymorphisms described in the PPARG, UCP2 and GPAT4 genes results in alterations in its expression in milk mammary gland epithelial cells and if this expression changes during lactation. To search for polymorphisms, fragments of the UCP2, LPL, SCD and PPARG genes were amplified by the PCR technique and submitted to electrophoresis, sequencing and PCR-RFLP. After the identification and characterization of the polymorphisms, approximately 180 animals were genotyped for the polymorphisms found in the UCP2 and PPARG genes and the genetic values of these animals were estimated from milk production and composition data using the univariate model. The evaluation of the association of these polymorphisms with the genetic value of the animals was performed through analysis of variance followed by Tukey test with significance level of 5%. In order to evaluate whether polymorphisms in the PPARG, UCP2 and GPAT4 genes affect its expression in milk mammary gland epithelial cells and if its expression varies during lactation, collections of these cell types were performed in 50 Alpine animals at 35 days post-partum, and in 20 of these animals, samples were also collected at 10, 50 and 140 days post-partum. As RNA degradation occurred in these samples, it was not possible to perform the gene expression analyzes in this material, so we chose to use this primers to evaluate the expression of these genes in cDNA samples of Longissimus lumborum muscle from another experiment of this same team. In this experiment, it was also evaluated whether the expression of these genes correlates with the slaughter weight, carcass weight and shear force characteristics. This correlation was assessed using the Pearson correlation test followed by the T-test. Polymorphisms were identified in the PPARG, UCP2 and LPL genes. The polymorphism identified in the PPARG gene was associated with the genetic value of the animals for total milk production, fat production, protein production, dry extract production and lactose production. In the UCP2 gene, two polymorphisms, ?3708G/A and ?2569G/A, are associated with the genetic value of the animals for percentages of fat, protein and dry extract. In the Longissimus lumborum muscle, the expression of the PPARG gene showed a positive correlation with the expression of the GPAT4 gene. From these results, it can be concluded that, potential molecular markers for milk production and quality were identified, that the methodology used for collection and storage of milk mammary gland epithelial cells is not suitable for subsequent gene expression analysis and that the GPAT4 gene is a probable PPAR-? target gene in the caprine longisimus lumborum muscle.No Brasil, como parte da produ??o de leite caprino ? voltada para a fabrica??o de derivados l?cteos, a avalia??o de par?metros de qualidade, como os teores de prote?na e de gordura, s?o fundamentais. Geralmente, programas de melhoramento que visam um aumento na qualidade do leite se valem apenas de mensura??es de fen?tipo, por?m, esse processo pode ser aprimorado com a utiliza??o de marcadores moleculares. Tendo em vista a busca por novos marcadores deste tipo em caprinos da ra?as Saanem e Alpina, com o presente trabalho objetivou-se identificar polimorfismos nos genes UCP2, LPL, SCD e PPARG e avaliar sua associa??o com o valor gen?tico destes animais para caracter?sticas de produ??o e qualidade do leite. Tamb?m objetivou-se avaliar se, em caprinos da ra?a Alpina, polimorfismos descritos nos genes PPARG, UCP2 e GPAT4 resultam em altera??es na sua express?o em c?lulas de descama??o do epit?lio da gl?ndula mam?ria presentes no leite e se essa express?o varia no decorrer lacta??o. Para realizar a busca por polimorfismos, fragmentos dos genes UCP2, LPL, SCD e PPARG foram amplificados pela t?cnica de PCR e submetidos a eletroforese, sequ?nciamento e PCR-RFLP. Posteriormente, aproximadamente 180 animais foram genotipados para polimorfismos encontrados nos genes UCP2 e PPARG e os valores gen?ticos destes animais foram estimados a partir de dados de produ??o e composi??o do leite, atrav?s do modelo unicaracter?stica. A associa??o dos gen?tipos com os valores gen?ticos foi ent?o avaliada atrav?s de an?lise de vari?ncia seguida por teste de Tukey a 5%. Para avaliar se polimorfismos nos genes PPARG, UCP2 e GPAT4 alteram sua express?o em c?lulas de descama??o do epit?lio da gl?ndula mam?ria presentes no leite e se essa express?o varia no decorrer da lacta??o, foram realizadas coletas destas tipos celulares em 50 animais da ra?a Alpina aos 35 dias p?s-parto, em 20 destes animais, tamb?m foram realizadas coletas aos 10, 50 e 140 dias p?s-parto. Como ocorreu a degrada??o do RNA nestas amostras, n?o foi poss?vel realizar as an?lises de express?o g?nica neste material, com isso, optamos por utilizar os primers para avaliar a express?o destes genes em amostras de cDNA de m?sculo Longissimus lumborum provenientes de um outro experimento desta mesma equipe. Neste experimento, tamb?m avaliou-se se a express?o destes genes apresenta correla??o com as caracter?sticas de peso ao abate, peso da carca?a e for?a de cisalhamento. Essa correla??o foi avaliada atrav?s do teste de correla??o Pearson seguido pelo teste T. Foram identificados polimorfismos nos genes PPARG, UCP2 e LPL. O polimorfismo identificado no gene PPARG apresentou associa??o com o valor gen?tico dos animais para as caracter?sticas de produ??o total de leite, de gordura, de prote?na, de extrato seco e de lactose. No gene UCP2, dois polimorfismos, ?3708G/A e -2569G/A, apresentam associa??o com o valor gen?tico dos animais para porcentagem de gordura, de prote?na e de extrato seco. No m?sculo longissimus lumborum, a express?o do gene PPARG apresentou correla??o positiva com a express?o do gene GPAT4. A partir destes resultados pode-se concluir que, foram identificados potenciais marcadores moleculares para produ??o e qualidade do leite, que a metodologia utilizada para coleta e armazenamento de c?lulas de descama??o do epit?lio da gl?ndula mam?ria presentes no leite n?o ? adequada para posterior an?lise de express?o g?nica e que o gene GPAT4 ? um prov?vel gene alvo do PPAR-? m?sculo longissimus lumborum de caprino.Submitted by Sandra Pereira (srpereira@ufrrj.br) on 2021-04-29T13:53:58Z No. of bitstreams: 1 2017 - Leonardo Ferreira.pdf: 2263466 bytes, checksum: d944bf79febb93fb8c515ac69e506343 (MD5)Made available in DSpace on 2021-04-29T13:53:58Z (GMT). No. of bitstreams: 1 2017 - Leonardo Ferreira.pdf: 2263466 bytes, checksum: d944bf79febb93fb8c515ac69e506343 (MD5) Previous issue date: 2017-12-15CAPES - Coordena??o de Aperfei?oamento de Pessoal de N?vel Superiorapplication/pdfhttps://tede.ufrrj.br/retrieve/64845/2017%20-%20Leonardo%20Ferreira.pdf.jpgporUniversidade Federal Rural do Rio de JaneiroPrograma de P?s-Gradua??o em ZootecniaUFRRJBrasilInstituto de ZootecniaAFFOURTIT, C.; BRAND, M. D. On the role of uncoupling protein-2 in pancreatic beta cells. Biochimica et Biophysica Acta (BBA) - Bioenergetics, v. 1777, n. 7?8, p. 973?979, jul. 2008. AKIRA, S. Functional Roles of STAT Family Proteins: Lessons from Knockout Mice. Stem Cells, v. 17, n. 3, p. 138?146, maio 1999. ALBERTS, B.; JOHNSON, A.; WALTER, P.; LEWIS, J.; RAFF, M.; ROBERTS, K.; WALTER P. Molecular biology of the cell. 4? ed. Garland Science, 2004. ALTSCHUL, S. F.; MADDEN, T. L.; SCH?FFER, A. A. Basic local alignment search tool. 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dc.title.por.fl_str_mv Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos
dc.title.alternative.eng.fl_str_mv Polymorphism in candidates genes related to lipid metabolism and its association with milk quality characteristics in goats
title Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos
spellingShingle Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos
Ferreira, Leonardo
express?o g?nica
marcadores moleculares
valor gen?tico
gene expression
genetic merit
molecular marker
Zootecnia
title_short Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos
title_full Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos
title_fullStr Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos
title_full_unstemmed Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos
title_sort Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos
author Ferreira, Leonardo
author_facet Ferreira, Leonardo
author_role author
dc.contributor.advisor1.fl_str_mv Soares, Maria Am?lia Menck
dc.contributor.advisor1ID.fl_str_mv 487.620.079-91
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/9850186052133290
dc.contributor.referee1.fl_str_mv Soares, Maria Am?lia Menck
dc.contributor.referee2.fl_str_mv Gasparino, Eliane
dc.contributor.referee3.fl_str_mv Ara?jo, Jean Luiz Sim?es
dc.contributor.referee4.fl_str_mv Silva, Heriberto Dias da
dc.contributor.referee5.fl_str_mv Ribeiro, Marina Mortati Dias
dc.contributor.authorID.fl_str_mv 066.432.169-07
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/1560720950612972
dc.contributor.author.fl_str_mv Ferreira, Leonardo
contributor_str_mv Soares, Maria Am?lia Menck
Soares, Maria Am?lia Menck
Gasparino, Eliane
Ara?jo, Jean Luiz Sim?es
Silva, Heriberto Dias da
Ribeiro, Marina Mortati Dias
dc.subject.por.fl_str_mv express?o g?nica
marcadores moleculares
valor gen?tico
topic express?o g?nica
marcadores moleculares
valor gen?tico
gene expression
genetic merit
molecular marker
Zootecnia
dc.subject.eng.fl_str_mv gene expression
genetic merit
molecular marker
dc.subject.cnpq.fl_str_mv Zootecnia
description In Brazil, as part of the goat milk produced is destined to the dairy industry, the evaluation of quality parameters, such as protein and fat content, is of great importance. Generally, breeding programs that aim an increase in milk quality, are based only on phenotype measurements, however, this process can be improved with the use of molecular markers. To search for new markers of this type in Saanem and Alpine goats, with this study we aimed to evaluate the association of polymorphisms in the UCP2, LPL, SCD and PPARG genes with dairy goats genetic value for milk production and quality characteristics. We also aimed to evaluate if polymorphisms described in the PPARG, UCP2 and GPAT4 genes results in alterations in its expression in milk mammary gland epithelial cells and if this expression changes during lactation. To search for polymorphisms, fragments of the UCP2, LPL, SCD and PPARG genes were amplified by the PCR technique and submitted to electrophoresis, sequencing and PCR-RFLP. After the identification and characterization of the polymorphisms, approximately 180 animals were genotyped for the polymorphisms found in the UCP2 and PPARG genes and the genetic values of these animals were estimated from milk production and composition data using the univariate model. The evaluation of the association of these polymorphisms with the genetic value of the animals was performed through analysis of variance followed by Tukey test with significance level of 5%. In order to evaluate whether polymorphisms in the PPARG, UCP2 and GPAT4 genes affect its expression in milk mammary gland epithelial cells and if its expression varies during lactation, collections of these cell types were performed in 50 Alpine animals at 35 days post-partum, and in 20 of these animals, samples were also collected at 10, 50 and 140 days post-partum. As RNA degradation occurred in these samples, it was not possible to perform the gene expression analyzes in this material, so we chose to use this primers to evaluate the expression of these genes in cDNA samples of Longissimus lumborum muscle from another experiment of this same team. In this experiment, it was also evaluated whether the expression of these genes correlates with the slaughter weight, carcass weight and shear force characteristics. This correlation was assessed using the Pearson correlation test followed by the T-test. Polymorphisms were identified in the PPARG, UCP2 and LPL genes. The polymorphism identified in the PPARG gene was associated with the genetic value of the animals for total milk production, fat production, protein production, dry extract production and lactose production. In the UCP2 gene, two polymorphisms, ?3708G/A and ?2569G/A, are associated with the genetic value of the animals for percentages of fat, protein and dry extract. In the Longissimus lumborum muscle, the expression of the PPARG gene showed a positive correlation with the expression of the GPAT4 gene. From these results, it can be concluded that, potential molecular markers for milk production and quality were identified, that the methodology used for collection and storage of milk mammary gland epithelial cells is not suitable for subsequent gene expression analysis and that the GPAT4 gene is a probable PPAR-? target gene in the caprine longisimus lumborum muscle.
publishDate 2017
dc.date.issued.fl_str_mv 2017-12-15
dc.date.accessioned.fl_str_mv 2021-04-29T13:53:58Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv FERREIRA, Leonardo. Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos. 2017. 64 f. Tese (Doutorado em Zootecnia) - Instituto de Zootecnia, Universidade Federal Rural do Rio de Janeiro, Serop?dica, RJ, 2017.
dc.identifier.uri.fl_str_mv https://tede.ufrrj.br/jspui/handle/jspui/4584
identifier_str_mv FERREIRA, Leonardo. Polimorfismo em genes candidatos relacionados ao metabolismo de lip?dios e sua associa??o com caracter?sticas de qualidade do leite em caprinos. 2017. 64 f. Tese (Doutorado em Zootecnia) - Instituto de Zootecnia, Universidade Federal Rural do Rio de Janeiro, Serop?dica, RJ, 2017.
url https://tede.ufrrj.br/jspui/handle/jspui/4584
dc.language.iso.fl_str_mv por
language por
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