Colletotrichum sp. causando mancha foliar em Cassia fistula L.: patogenicidade, morfologia, caracterização molecular e controle in vitro

Detalhes bibliográficos
Ano de defesa: 2016
Autor(a) principal: Rabuske, Jessica Emilia lattes
Orientador(a): Muniz, Marlove Fatima Brião lattes
Banca de defesa: Poletto, Igor lattes, Reiniger, Lia Rejane Silveira lattes
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Santa Maria
Centro de Ciências Rurais
Programa de Pós-Graduação: Programa de Pós-Graduação em Engenharia Florestal
Departamento: Recursos Florestais e Engenharia Florestal
País: Brasil
Palavras-chave em Português:
ITS
Área do conhecimento CNPq:
Link de acesso: http://repositorio.ufsm.br/handle/1/17996
Resumo: The species Cassia fistula L., popularly known as chuva-de-ouro, is an exotic arboreta, used for the purpose of urban trees, however, despite its ornamental value, the species has not been the subject of research papers, especially those who involving the diagnosis or description of phytopathogenic microorganisms causing diseases which could cause harm and/or lead to plant death. So after observing symptoms of leaf spots with dark coloring and irregular contour, distributed by the leaf blade, the prior identification of the pathogen was made which attributed the symptoms to the fungal genus Colletotrichum. Thus, this study aimed to determine the pathogenicity of Colletotrichumsp. associated with leaflets of Cassia fistula and characterize morphological, physiological and molecular pathogen to the species level, and to verify the efficiency of in vitro biological control of the fungus. The morphological characterization was performed based on the size of the conidia and the color of the colony on PDA, and the physiological characterization, tested different temperatures, influences the culture medium and the brightness in the pathogen mycelial growth. Molecular identification were sequenced three genomic regions isolated, which are: ITS, elongation factor 1-α and beta-tubulin. In biological control test was used Trichoderma spp. in commercial forms Agrotrich Plus®, Biotrich® and Ecotrich®. In vitro control tests were conducted by paired comparison method of test cultures and the volatile metabolites. The isolates Colletotrichum sp. were pathogenic to Cassia fistula causing leaf spot. In general, Mathur means contributed best responses mycelial growth and sporulation, but both tests show variation between isolates analyzed. The morphological characteristics present great variability, hindering the definition of the species. Most isolates showed conidia with dimensions that can be classified as C. gloeosporioides. The PCR tool was able to identify isolates of C. gloeosporioides starting the amplified product of beta-tubulin and the elongation fator region. However, not all isolates were identified in this manner, suggesting that the species has great variability of the amplified regions. Trichoderma spp., can be exploited as biological control of leaf spot in Cassia fistula. However, it is suggested to carry out in vivo tests to evaluate the antagonistic potential of Trichoderma.
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spelling 2019-08-22T18:13:47Z2019-08-22T18:13:47Z2016-02-25http://repositorio.ufsm.br/handle/1/17996The species Cassia fistula L., popularly known as chuva-de-ouro, is an exotic arboreta, used for the purpose of urban trees, however, despite its ornamental value, the species has not been the subject of research papers, especially those who involving the diagnosis or description of phytopathogenic microorganisms causing diseases which could cause harm and/or lead to plant death. So after observing symptoms of leaf spots with dark coloring and irregular contour, distributed by the leaf blade, the prior identification of the pathogen was made which attributed the symptoms to the fungal genus Colletotrichum. Thus, this study aimed to determine the pathogenicity of Colletotrichumsp. associated with leaflets of Cassia fistula and characterize morphological, physiological and molecular pathogen to the species level, and to verify the efficiency of in vitro biological control of the fungus. The morphological characterization was performed based on the size of the conidia and the color of the colony on PDA, and the physiological characterization, tested different temperatures, influences the culture medium and the brightness in the pathogen mycelial growth. Molecular identification were sequenced three genomic regions isolated, which are: ITS, elongation factor 1-α and beta-tubulin. In biological control test was used Trichoderma spp. in commercial forms Agrotrich Plus®, Biotrich® and Ecotrich®. In vitro control tests were conducted by paired comparison method of test cultures and the volatile metabolites. The isolates Colletotrichum sp. were pathogenic to Cassia fistula causing leaf spot. In general, Mathur means contributed best responses mycelial growth and sporulation, but both tests show variation between isolates analyzed. The morphological characteristics present great variability, hindering the definition of the species. Most isolates showed conidia with dimensions that can be classified as C. gloeosporioides. The PCR tool was able to identify isolates of C. gloeosporioides starting the amplified product of beta-tubulin and the elongation fator region. However, not all isolates were identified in this manner, suggesting that the species has great variability of the amplified regions. Trichoderma spp., can be exploited as biological control of leaf spot in Cassia fistula. However, it is suggested to carry out in vivo tests to evaluate the antagonistic potential of Trichoderma.A espécie Cassia fistula L., conhecida popularmente como chuva-de-ouro, é uma arboreta exótica, utilizada para fins de arborização urbana, porém, apesar do seu valor ornamental, a espécie não tem sido objeto de pesquisa, principalmente os relacionados à diagnose ou descrição de microrganismos fitopatogênicos, que podem causar prejuízos e/ou levar a planta a morte. Anualmente, tem sido observados sintomas de manchas foliares com coloração escura e contorno irregular distribuídas pelo limbo foliar na espécie Cassia fistula, estas manchas ainda não possuem um diagnóstico conhecido e após verificações prévias essas manchas foram associadas ao gênero Colletotrichum. O presente trabalho teve como objetivo verificar a patogenicidade de Colletotrichum sp. associado a folíolos de Cassia fistula e caracterizar morfológica, fisiologica e molecularmente o patógeno em nível de espécie, bem como, estudar a eficiência in vitro do controle biológico de produtos comerciais a base de Trichoderma spp. sobre Colletotrichum. O patógeno, ainda não relatado foi descrito morfológicamete através do tamanho dos conídios, pela coloração da colônia em BDA (Batata-Dextrose-Ágar), e para a caracterização fisiológica, testaram-se diferentes temperaturas, influencia do meio de cultura e da luminosidade no crescimento micelial do patógeno, e para a identificação molecular, foram sequenciadas três regiões genômicas do isolado, sendo elas: ITS, fator de elongação 1-α e beta-tubulina. Nos testes de controle biológico utilizou-se Trichoderma spp. nas formas comerciais Agrotrich Plus®, Biotrich® e Ecotrich®. Os testes de controle in vitro foram realizados pelo método de confronto pareado de culturas e pelo teste de metabólitos voláteis. Os isolados de Colletotrichum sp. foram patogênicos à Cassia fistula causando mancha foliar. Em geral, o meio Mathur apresentou melhores respostas de crescimento micelial e esporulação, porém os testes apresentaram variação entre os isolados analisados. As características morfológicas apresentaram grande variabilidade, inviabilizando a definição de espécie. A maioria dos isolados apresentou conídios com dimensões que permitiram a classificação como C. gloeosporioides. A ferramenta PCR foi capaz de identificar isolados da espécie C. gloeosporioides apartir do produto amplificado da região beta-tubulina e do fator de elongação. No entanto, nem todos os isolados foram identificados desta maneira, sugerindo que a espécie apresenta grande variabilidade nas regiões amplificadas. Trichoderma spp., pode ser utilizado como controle biológico da mancha foliar em Cassia fistula. 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dc.title.por.fl_str_mv Colletotrichum sp. causando mancha foliar em Cassia fistula L.: patogenicidade, morfologia, caracterização molecular e controle in vitro
dc.title.alternative.eng.fl_str_mv Colletotrichum sp. causing leaf spot in Cassia fistulaL. : pathogenicity, morphology, description molecular and control in vitro
title Colletotrichum sp. causando mancha foliar em Cassia fistula L.: patogenicidade, morfologia, caracterização molecular e controle in vitro
spellingShingle Colletotrichum sp. causando mancha foliar em Cassia fistula L.: patogenicidade, morfologia, caracterização molecular e controle in vitro
Rabuske, Jessica Emilia
Chuva-de-ouro
Trichoderma spp.
ITS
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL
title_short Colletotrichum sp. causando mancha foliar em Cassia fistula L.: patogenicidade, morfologia, caracterização molecular e controle in vitro
title_full Colletotrichum sp. causando mancha foliar em Cassia fistula L.: patogenicidade, morfologia, caracterização molecular e controle in vitro
title_fullStr Colletotrichum sp. causando mancha foliar em Cassia fistula L.: patogenicidade, morfologia, caracterização molecular e controle in vitro
title_full_unstemmed Colletotrichum sp. causando mancha foliar em Cassia fistula L.: patogenicidade, morfologia, caracterização molecular e controle in vitro
title_sort Colletotrichum sp. causando mancha foliar em Cassia fistula L.: patogenicidade, morfologia, caracterização molecular e controle in vitro
author Rabuske, Jessica Emilia
author_facet Rabuske, Jessica Emilia
author_role author
dc.contributor.advisor1.fl_str_mv Muniz, Marlove Fatima Brião
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/3148312031889388
dc.contributor.referee1.fl_str_mv Poletto, Igor
dc.contributor.referee1Lattes.fl_str_mv http://lattes.cnpq.br/5851156257793439
dc.contributor.referee2.fl_str_mv Reiniger, Lia Rejane Silveira
dc.contributor.referee2Lattes.fl_str_mv http://lattes.cnpq.br/5739294882585391
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/7801730498767658
dc.contributor.author.fl_str_mv Rabuske, Jessica Emilia
contributor_str_mv Muniz, Marlove Fatima Brião
Poletto, Igor
Reiniger, Lia Rejane Silveira
dc.subject.por.fl_str_mv Chuva-de-ouro
Trichoderma spp.
ITS
topic Chuva-de-ouro
Trichoderma spp.
ITS
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL
description The species Cassia fistula L., popularly known as chuva-de-ouro, is an exotic arboreta, used for the purpose of urban trees, however, despite its ornamental value, the species has not been the subject of research papers, especially those who involving the diagnosis or description of phytopathogenic microorganisms causing diseases which could cause harm and/or lead to plant death. So after observing symptoms of leaf spots with dark coloring and irregular contour, distributed by the leaf blade, the prior identification of the pathogen was made which attributed the symptoms to the fungal genus Colletotrichum. Thus, this study aimed to determine the pathogenicity of Colletotrichumsp. associated with leaflets of Cassia fistula and characterize morphological, physiological and molecular pathogen to the species level, and to verify the efficiency of in vitro biological control of the fungus. The morphological characterization was performed based on the size of the conidia and the color of the colony on PDA, and the physiological characterization, tested different temperatures, influences the culture medium and the brightness in the pathogen mycelial growth. Molecular identification were sequenced three genomic regions isolated, which are: ITS, elongation factor 1-α and beta-tubulin. In biological control test was used Trichoderma spp. in commercial forms Agrotrich Plus®, Biotrich® and Ecotrich®. In vitro control tests were conducted by paired comparison method of test cultures and the volatile metabolites. The isolates Colletotrichum sp. were pathogenic to Cassia fistula causing leaf spot. In general, Mathur means contributed best responses mycelial growth and sporulation, but both tests show variation between isolates analyzed. The morphological characteristics present great variability, hindering the definition of the species. Most isolates showed conidia with dimensions that can be classified as C. gloeosporioides. The PCR tool was able to identify isolates of C. gloeosporioides starting the amplified product of beta-tubulin and the elongation fator region. However, not all isolates were identified in this manner, suggesting that the species has great variability of the amplified regions. Trichoderma spp., can be exploited as biological control of leaf spot in Cassia fistula. However, it is suggested to carry out in vivo tests to evaluate the antagonistic potential of Trichoderma.
publishDate 2016
dc.date.issued.fl_str_mv 2016-02-25
dc.date.accessioned.fl_str_mv 2019-08-22T18:13:47Z
dc.date.available.fl_str_mv 2019-08-22T18:13:47Z
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dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
Centro de Ciências Rurais
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dc.publisher.initials.fl_str_mv UFSM
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Recursos Florestais e Engenharia Florestal
publisher.none.fl_str_mv Universidade Federal de Santa Maria
Centro de Ciências Rurais
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