Influência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis

Detalhes bibliográficos
Ano de defesa: 2009
Autor(a) principal: Harami, Talita
Orientador(a): Passos, Flávia Maria Lopes lattes
Banca de defesa: Bazzolli, Denise Mara Soares lattes, Vanetti, Maria Cristina Dantas lattes, Ramos, Juliana Rocha Lopes Soares lattes
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Viçosa
Programa de Pós-Graduação: Mestrado em Microbiologia Agrícola
Departamento: Associações micorrízicas; Bactérias láticas e probióticos; Biologia molecular de fungos de interesse
País: BR
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://locus.ufv.br/handle/123456789/5307
Resumo: This work is a contribution to the studies about the role of KlRox1p in fermentative metabolism of Kluyveromyces lactis. Rox1p is known in Saccharomyces cerevisiae by repressing in aerobic conditions genes that are expressed when oxygen is limited. The kinetics growth of lineages of Kluyveromyces lactis MW270-7B and its derivative mutant K. lactis MW270- 7B rox1Δ was carry out on YNB media (Yeast Nitrogen Base) containing fermentative carbon sources (glucose and lactose) or non fermentative carbon sources (glycerol and ethanol) to determine the growth profile on this sources. Besides both yeasts had its fermentative capacity researched in the presence of an inhibitor of electron chain carrier, antimicin A on YPD (yeast extract, peptone and glucose). The results indicated that the absence of KlROX1 didn't favor the growth in fermentative carbon sources, but it favored in non fermentative carbon sources. The more fermentative capacity of K. lactis rox1Δ was confirmed for the higher ethanol yield for biomass detected in the absence and presence of antimicin A (10 and 20 µM). The lineages rox1 mutant and control were also cultivated on YNB plus glucose under aerobic continuous culture (D = 0,01 h-1) and later they were submitted to a hypoxic condition for 9 hours. Samples were collected every 3 hours for analysis of the expression of putative target genes of KlRox1p as well as analysis of ethanol and of the enzymatic activity of the alcohol desidrogenase (ADH). For the analysis of gene expression, recognition sequences for KlRox1p were researched in silico in the promoters of the genes KlAAC3, KlCOX5B, KlHEM13, KlHAP1, KlRAG1 and KlADH1 and they were found diverging of two nucleotide of the consensus sequence YYYATTGTTCTC. KlRox1p showed to have negative effect on expression of KlAAC3 and KlHEM13, but it didn't seem to act on KlCOX5B. The ethanol concentration, the activity of ADH and the expression of KlADH1 evidenced the metabolism more fermentative of K. lactis rox1Δ on aerobic and hypoxic conditions. And in a way not known, KlRox1p acts on expression of KlHAP1 and KlRAG1. The influence of KlRox1p on expression of KlADH1, KlRAG1 and KlHAP1 suggests the participation of KlRox1p in the control of key points of the fermentative metabolism: entrance of the glucose that determine the flow for the maintenance of fermentative way, as well as in the reductive reaction end that culminates with the ethanol production. The existence of genes that showed to be regulated negatively by KlRox1p in aerobic condition, like KlAAC3 and KlHEM13, indicates the existence in K. lactis of mechanism of transcriptional regulation for oxygen that intends to better use the oxygen in a limit condition, similar to the function of Rox1p in Saccharomyces cerevisiae. However that mechanism seems not just to be related with the concentrations of oxygen, but also with the carbon sources used, fermentative sources or non fermentative sources.
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spelling Harami, Talitahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4750606T5Fietto, Luciano Gomeshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763824H8Mantovani, Hilário Cuquettohttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4727026Z7Passos, Flávia Maria Lopeshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781817D3Bazzolli, Denise Mara Soareshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4761710D6Vanetti, Maria Cristina Dantashttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783874H3Ramos, Juliana Rocha Lopes Soareshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4790613J32015-03-26T13:51:46Z2009-08-032015-03-26T13:51:46Z2009-02-16HARAMI, Talita. Influence of KlRox1p on fermentative metabolism of Kluyveromyces lactis. 2009. 62 f. Dissertação (Mestrado em Associações micorrízicas; Bactérias láticas e probióticos; Biologia molecular de fungos de interesse) - Universidade Federal de Viçosa, Viçosa, 2009.http://locus.ufv.br/handle/123456789/5307This work is a contribution to the studies about the role of KlRox1p in fermentative metabolism of Kluyveromyces lactis. Rox1p is known in Saccharomyces cerevisiae by repressing in aerobic conditions genes that are expressed when oxygen is limited. The kinetics growth of lineages of Kluyveromyces lactis MW270-7B and its derivative mutant K. lactis MW270- 7B rox1Δ was carry out on YNB media (Yeast Nitrogen Base) containing fermentative carbon sources (glucose and lactose) or non fermentative carbon sources (glycerol and ethanol) to determine the growth profile on this sources. Besides both yeasts had its fermentative capacity researched in the presence of an inhibitor of electron chain carrier, antimicin A on YPD (yeast extract, peptone and glucose). The results indicated that the absence of KlROX1 didn't favor the growth in fermentative carbon sources, but it favored in non fermentative carbon sources. The more fermentative capacity of K. lactis rox1Δ was confirmed for the higher ethanol yield for biomass detected in the absence and presence of antimicin A (10 and 20 µM). The lineages rox1 mutant and control were also cultivated on YNB plus glucose under aerobic continuous culture (D = 0,01 h-1) and later they were submitted to a hypoxic condition for 9 hours. Samples were collected every 3 hours for analysis of the expression of putative target genes of KlRox1p as well as analysis of ethanol and of the enzymatic activity of the alcohol desidrogenase (ADH). For the analysis of gene expression, recognition sequences for KlRox1p were researched in silico in the promoters of the genes KlAAC3, KlCOX5B, KlHEM13, KlHAP1, KlRAG1 and KlADH1 and they were found diverging of two nucleotide of the consensus sequence YYYATTGTTCTC. KlRox1p showed to have negative effect on expression of KlAAC3 and KlHEM13, but it didn't seem to act on KlCOX5B. The ethanol concentration, the activity of ADH and the expression of KlADH1 evidenced the metabolism more fermentative of K. lactis rox1Δ on aerobic and hypoxic conditions. And in a way not known, KlRox1p acts on expression of KlHAP1 and KlRAG1. The influence of KlRox1p on expression of KlADH1, KlRAG1 and KlHAP1 suggests the participation of KlRox1p in the control of key points of the fermentative metabolism: entrance of the glucose that determine the flow for the maintenance of fermentative way, as well as in the reductive reaction end that culminates with the ethanol production. The existence of genes that showed to be regulated negatively by KlRox1p in aerobic condition, like KlAAC3 and KlHEM13, indicates the existence in K. lactis of mechanism of transcriptional regulation for oxygen that intends to better use the oxygen in a limit condition, similar to the function of Rox1p in Saccharomyces cerevisiae. However that mechanism seems not just to be related with the concentrations of oxygen, but also with the carbon sources used, fermentative sources or non fermentative sources.Esse trabalho é uma contribuição aos estudos sobre a função de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis. Rox1p é conhecida em Saccharomyces cerevisiae por reprimir, em aerobiose, genes que são expressos em condição limitante de oxigênio. A cinética de crescimento de linhagens de Kluyveromyces lactis MW270-7B e sua mutante derivativa K. lactis MW270-7B rox1Δ foi realizada em meio YNB (Yeast Nitrogen Base) contendo fontes de carbono fermentáveis (glicose e lactose) ou não fermentáveis (glicerol e etanol) para determinar o perfil de crescimento nessas fontes. Além disso, ambas as linhagens tiveram sua capacidade fermentativa avaliada na presença de um inibidor da cadeia transportadora de elétrons, antimicina A, em meio YPD (extrato de levedura, peptona e glicose). Os resultados indicaram que a ausência de KlROX1 não favoreceu o crescimento em fontes de carbono fermentáveis, mas favoreceu em fontes de carbono não fermentáveis. A maior capacidade fermentativa de K. lactis rox1Δ foi confirmada pelo maior rendimento de etanol por biomassa detectada, na ausência e presença de antimicina A (10 e 20 µM). As linhagens mutante rox1 e controle também foram cultivadas em YNB e glicose em regime contínuo (D= 0,1h-1) sob aerobiose e, em seguida, submetidas à hipoxia por 9 horas. Amostras foram coletadas a cada 3 horas para análise da expressão de possíveis genes alvos de KlRox1p, bem como de etanol e da atividade da álcool desidrogenase (ADH). Para análise da expressão gênica, sequências de reconhecimento por KlRox1p foram pesquisadas in silico nos promotores dos genes KlAAC3, KlCOX5B, KlHEM13, KlHAP1, KlRAG1 e KlADH1 e foram encontradas divergindo de dois nucleotídeos da sequência consenso YYYATTGTTCTC. KlRox1p mostrou ter efeito negativo sobre as expressões de KlAAC3 e KlHEM13 em aerobiose, mas não pareceu atuar sobre KlCOX5B. A concentração de etanol, a atividade da ADH e a expressão de KlADH1 evidenciaram o metabolismo mais fermentativo de K. lactis rox1Δ tanto em aerobiose quanto em hipoxia. E, por um mecanismo ainda desconhecido, KlRox1p atuou sobre as expressões de KlHAP1 e KlRAG1. A influência de KlRox1p na expressão de KlADH1, KlRAG1 e KlHAP1, sugere a participação de KlRox1p no controle de pontos chaves do metabolismo fermentativo: entrada da glicose, que determina o fluxo para a manutenção de uma via fermentativa, bem como na reação redutiva final, que culmina com a formação de etanol. A existência de genes que mostraram ser regulados negativamente por KlRox1p em aerobiose, como KlAAC3 e KlHEM13, indica a existência em K. lactis de mecanismo de regulação transcricional por oxigênio que visa melhor utilizar o oxigênio numa condição limitante, semelhante à função de Rox1p em Saccharomyces cerevisiae. Esse mecanismo, entretanto, parece não estar relacionado apenas com as concentrações de oxigênio, mas também com metabolismo de carbono fermentável ou não fermentável.Coordenação de Aperfeiçoamento de Pessoal de Nível Superiorapplication/pdfporUniversidade Federal de ViçosaMestrado em Microbiologia AgrícolaUFVBRAssociações micorrízicas; Bactérias láticas e probióticos; Biologia molecular de fungos de interesseKluyveromyces lactisMetabolismo fermentativoExpressão gênicaKluyveromyces lactisFermentative metabolismGene expressionCNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA::BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOSInfluência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactisInfluence of KlRox1p on fermentative metabolism of Kluyveromyces lactisinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf697140https://locus.ufv.br//bitstream/123456789/5307/1/texto%20completo.pdfa673ff7affad18149751f45b84127b29MD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain88748https://locus.ufv.br//bitstream/123456789/5307/2/texto%20completo.pdf.txt478e70351b8f797d3276a941ecba15f2MD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3545https://locus.ufv.br//bitstream/123456789/5307/3/texto%20completo.pdf.jpgb970b55c67c2416d2e5091fc6652958fMD53123456789/53072016-04-10 23:16:20.942oai:locus.ufv.br:123456789/5307Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-11T02:16:20LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Influência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis
dc.title.alternative.eng.fl_str_mv Influence of KlRox1p on fermentative metabolism of Kluyveromyces lactis
title Influência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis
spellingShingle Influência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis
Harami, Talita
Kluyveromyces lactis
Metabolismo fermentativo
Expressão gênica
Kluyveromyces lactis
Fermentative metabolism
Gene expression
CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA::BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOS
title_short Influência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis
title_full Influência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis
title_fullStr Influência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis
title_full_unstemmed Influência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis
title_sort Influência de KlRox1p no metabolismo fermentativo de Kluyveromyces lactis
author Harami, Talita
author_facet Harami, Talita
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4750606T5
dc.contributor.author.fl_str_mv Harami, Talita
dc.contributor.advisor-co1.fl_str_mv Fietto, Luciano Gomes
dc.contributor.advisor-co1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763824H8
dc.contributor.advisor-co2.fl_str_mv Mantovani, Hilário Cuquetto
dc.contributor.advisor-co2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4727026Z7
dc.contributor.advisor1.fl_str_mv Passos, Flávia Maria Lopes
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781817D3
dc.contributor.referee1.fl_str_mv Bazzolli, Denise Mara Soares
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4761710D6
dc.contributor.referee2.fl_str_mv Vanetti, Maria Cristina Dantas
dc.contributor.referee2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783874H3
dc.contributor.referee3.fl_str_mv Ramos, Juliana Rocha Lopes Soares
dc.contributor.referee3Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4790613J3
contributor_str_mv Fietto, Luciano Gomes
Mantovani, Hilário Cuquetto
Passos, Flávia Maria Lopes
Bazzolli, Denise Mara Soares
Vanetti, Maria Cristina Dantas
Ramos, Juliana Rocha Lopes Soares
dc.subject.por.fl_str_mv Kluyveromyces lactis
Metabolismo fermentativo
Expressão gênica
topic Kluyveromyces lactis
Metabolismo fermentativo
Expressão gênica
Kluyveromyces lactis
Fermentative metabolism
Gene expression
CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA::BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOS
dc.subject.eng.fl_str_mv Kluyveromyces lactis
Fermentative metabolism
Gene expression
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA::BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOS
description This work is a contribution to the studies about the role of KlRox1p in fermentative metabolism of Kluyveromyces lactis. Rox1p is known in Saccharomyces cerevisiae by repressing in aerobic conditions genes that are expressed when oxygen is limited. The kinetics growth of lineages of Kluyveromyces lactis MW270-7B and its derivative mutant K. lactis MW270- 7B rox1Δ was carry out on YNB media (Yeast Nitrogen Base) containing fermentative carbon sources (glucose and lactose) or non fermentative carbon sources (glycerol and ethanol) to determine the growth profile on this sources. Besides both yeasts had its fermentative capacity researched in the presence of an inhibitor of electron chain carrier, antimicin A on YPD (yeast extract, peptone and glucose). The results indicated that the absence of KlROX1 didn't favor the growth in fermentative carbon sources, but it favored in non fermentative carbon sources. The more fermentative capacity of K. lactis rox1Δ was confirmed for the higher ethanol yield for biomass detected in the absence and presence of antimicin A (10 and 20 µM). The lineages rox1 mutant and control were also cultivated on YNB plus glucose under aerobic continuous culture (D = 0,01 h-1) and later they were submitted to a hypoxic condition for 9 hours. Samples were collected every 3 hours for analysis of the expression of putative target genes of KlRox1p as well as analysis of ethanol and of the enzymatic activity of the alcohol desidrogenase (ADH). For the analysis of gene expression, recognition sequences for KlRox1p were researched in silico in the promoters of the genes KlAAC3, KlCOX5B, KlHEM13, KlHAP1, KlRAG1 and KlADH1 and they were found diverging of two nucleotide of the consensus sequence YYYATTGTTCTC. KlRox1p showed to have negative effect on expression of KlAAC3 and KlHEM13, but it didn't seem to act on KlCOX5B. The ethanol concentration, the activity of ADH and the expression of KlADH1 evidenced the metabolism more fermentative of K. lactis rox1Δ on aerobic and hypoxic conditions. And in a way not known, KlRox1p acts on expression of KlHAP1 and KlRAG1. The influence of KlRox1p on expression of KlADH1, KlRAG1 and KlHAP1 suggests the participation of KlRox1p in the control of key points of the fermentative metabolism: entrance of the glucose that determine the flow for the maintenance of fermentative way, as well as in the reductive reaction end that culminates with the ethanol production. The existence of genes that showed to be regulated negatively by KlRox1p in aerobic condition, like KlAAC3 and KlHEM13, indicates the existence in K. lactis of mechanism of transcriptional regulation for oxygen that intends to better use the oxygen in a limit condition, similar to the function of Rox1p in Saccharomyces cerevisiae. However that mechanism seems not just to be related with the concentrations of oxygen, but also with the carbon sources used, fermentative sources or non fermentative sources.
publishDate 2009
dc.date.available.fl_str_mv 2009-08-03
2015-03-26T13:51:46Z
dc.date.issued.fl_str_mv 2009-02-16
dc.date.accessioned.fl_str_mv 2015-03-26T13:51:46Z
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dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv HARAMI, Talita. Influence of KlRox1p on fermentative metabolism of Kluyveromyces lactis. 2009. 62 f. Dissertação (Mestrado em Associações micorrízicas; Bactérias láticas e probióticos; Biologia molecular de fungos de interesse) - Universidade Federal de Viçosa, Viçosa, 2009.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/5307
identifier_str_mv HARAMI, Talita. Influence of KlRox1p on fermentative metabolism of Kluyveromyces lactis. 2009. 62 f. Dissertação (Mestrado em Associações micorrízicas; Bactérias láticas e probióticos; Biologia molecular de fungos de interesse) - Universidade Federal de Viçosa, Viçosa, 2009.
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dc.publisher.country.fl_str_mv BR
dc.publisher.department.fl_str_mv Associações micorrízicas; Bactérias láticas e probióticos; Biologia molecular de fungos de interesse
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