Mapeamento e validação de QTLs de resistência ao nematóide de cisto da soja

Detalhes bibliográficos
Ano de defesa: 2006
Autor(a) principal: Ferreira, Marcia Flores da Silva
Orientador(a): Moreira, Maurílio Alves lattes
Banca de defesa: Cruz, Cosme Damião lattes, Barros, Everaldo Gonçalves de lattes, Guimarães, Cláudia Teixeira lattes, Caixeta, Eveline Teixeira lattes
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Viçosa
Programa de Pós-Graduação: Doutorado em Genética e Melhoramento
Departamento: Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me
País: BR
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://locus.ufv.br/handle/123456789/1296
Resumo: To study soybean (Glycine max (L.) Merrill) resistance to the cyst nematode - NCS (Heterodera glycines Ichinohe) and to help the implantation of the marker assisted selection in breeding programs, the present work was carried with the following objectives: (a) to study the inheritance of resistance to the races 3, 9 and 14 of NCS in different populations; (b) to identify and map microsatellites linked to gene(s) for resistance to those races in a population of recombinant inbred lines (RILs); (c) to validate QTLs in F2 populations originated from different resistance sources from which the QTLs were mapped; and (d) to map QTLs for several agronomic characteristics of soybean. In the inheritance study, four epistatic genes for resistance to the race 14 and three epistatic genes for the races 3 and 9 were detected in the RILs population of the crossing Hartwig x Y23. In F2 population from the crossing Msoy8001 x Conquista, a recessive gene conditioning moderate resistance and two recessive genes giving complete resistance to race 3 were identified. For race 14, two recessive genes for the moderate resistance were identified in the F2 population of the crossing S5995 x Renascença. In mapping of QTLs in RILs, for resistance to NCS, the following were identified: four QTLs for race 3 in the linkage groups (GL) G, A2, J and M, explaining from 12.9% to 34.8% of phenotypic variation; one QTL for resistance to race 9 in GL G, explaining 22% of resistance; and only significant associations between markers and race 14, mainly in the GL G and C2. For race 3, the assisted selection accomplished with the most significant markers of the GL G and A2 showed a result similar to that of the phenotypic selection. In validation of microsatellites for marker assisted selection of plants with resistance to race 3, the association of resistance with markers of GLs A2 and G was confirmed, and together the markers Satt309 in GL G and GMENOD2B in GL A2 showed 100% efficiency in selection (ES). For resistance to race 14, evaluated in the population S5995 x Renascença, only markers in GL G showed significant association with resistance. The Satt309 marker explained the highest proportion of phenotypic variance. The best marker combination for the selection of plants resistant to this race was Satt309 with Satt356, that together provided 100% of ES. In 2001, studying the QTLs mapping for agronomic characteristics, were mapped: five QTLs in GL D1a for the characteristics concerning to days for flowering - R1, plant height in flowering APF, first pod height APV, pod number per plant NVP, and seed number per plant NSP; four QTLs in GL N for the characteristics concerning to APF, R1, node numbers in maturation NNM, and days for maturation - R8; and two QTLs in GL F for node number at maturation NNM, and seed number per plant NSP. In evaluations performed in 2002, the QTLs were identified in GL A2 (NNM), C2 (APV, NVP), D1a (R1), N (R8), F (NNM), K (R8, APF and APV), H and J (both for NSP). For the yield, evaluated in 2001, QTLs were detected in the GLs E, G, O and K. In both years, consistent QTLs were mapped for R1 (GL D1a), R8 (GL N) and NNM (GL F). In 2001, the intervals between the markers Satt147 - Satt408 (GL D1a) and Sat_033 - Satt237 (GL N) were significant for several characteristics, therefore suggesting a pleiotropic effect of these regions for different characteristics. It is worth to emphasize that these results will be useful to the assisted selection for resistance to NCS in the Brazilian soybean breeding programs.
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spelling Ferreira, Marcia Flores da Silvahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4760918H6Moreira, Maurílio Alveshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4796105P2Cruz, Cosme Damiãohttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4788274A6Barros, Everaldo Gonçalves dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781285J6Guimarães, Cláudia Teixeirahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4782346A3Caixeta, Eveline Teixeirahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4728636Z72015-03-26T12:45:21Z2006-12-222015-03-26T12:45:21Z2006-02-20FERREIRA, Marcia Flores da Silva. Mapping and validation of QTLs for resistance to soybean cyst nematode. 2006. 124 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2006.http://locus.ufv.br/handle/123456789/1296To study soybean (Glycine max (L.) Merrill) resistance to the cyst nematode - NCS (Heterodera glycines Ichinohe) and to help the implantation of the marker assisted selection in breeding programs, the present work was carried with the following objectives: (a) to study the inheritance of resistance to the races 3, 9 and 14 of NCS in different populations; (b) to identify and map microsatellites linked to gene(s) for resistance to those races in a population of recombinant inbred lines (RILs); (c) to validate QTLs in F2 populations originated from different resistance sources from which the QTLs were mapped; and (d) to map QTLs for several agronomic characteristics of soybean. In the inheritance study, four epistatic genes for resistance to the race 14 and three epistatic genes for the races 3 and 9 were detected in the RILs population of the crossing Hartwig x Y23. In F2 population from the crossing Msoy8001 x Conquista, a recessive gene conditioning moderate resistance and two recessive genes giving complete resistance to race 3 were identified. For race 14, two recessive genes for the moderate resistance were identified in the F2 population of the crossing S5995 x Renascença. In mapping of QTLs in RILs, for resistance to NCS, the following were identified: four QTLs for race 3 in the linkage groups (GL) G, A2, J and M, explaining from 12.9% to 34.8% of phenotypic variation; one QTL for resistance to race 9 in GL G, explaining 22% of resistance; and only significant associations between markers and race 14, mainly in the GL G and C2. For race 3, the assisted selection accomplished with the most significant markers of the GL G and A2 showed a result similar to that of the phenotypic selection. In validation of microsatellites for marker assisted selection of plants with resistance to race 3, the association of resistance with markers of GLs A2 and G was confirmed, and together the markers Satt309 in GL G and GMENOD2B in GL A2 showed 100% efficiency in selection (ES). For resistance to race 14, evaluated in the population S5995 x Renascença, only markers in GL G showed significant association with resistance. The Satt309 marker explained the highest proportion of phenotypic variance. The best marker combination for the selection of plants resistant to this race was Satt309 with Satt356, that together provided 100% of ES. In 2001, studying the QTLs mapping for agronomic characteristics, were mapped: five QTLs in GL D1a for the characteristics concerning to days for flowering - R1, plant height in flowering APF, first pod height APV, pod number per plant NVP, and seed number per plant NSP; four QTLs in GL N for the characteristics concerning to APF, R1, node numbers in maturation NNM, and days for maturation - R8; and two QTLs in GL F for node number at maturation NNM, and seed number per plant NSP. In evaluations performed in 2002, the QTLs were identified in GL A2 (NNM), C2 (APV, NVP), D1a (R1), N (R8), F (NNM), K (R8, APF and APV), H and J (both for NSP). For the yield, evaluated in 2001, QTLs were detected in the GLs E, G, O and K. In both years, consistent QTLs were mapped for R1 (GL D1a), R8 (GL N) and NNM (GL F). In 2001, the intervals between the markers Satt147 - Satt408 (GL D1a) and Sat_033 - Satt237 (GL N) were significant for several characteristics, therefore suggesting a pleiotropic effect of these regions for different characteristics. It is worth to emphasize that these results will be useful to the assisted selection for resistance to NCS in the Brazilian soybean breeding programs.Visando estudar a resistência da soja (Glycine max (L.) Merrill) ao nematóide de cisto - NCS (Heterodera glycines Ichinohe) e auxiliar a implantação da seleção assistida por marcadores moleculares nos programas de melhoramento, o presente trabalho teve como objetivos: (a) estudar a herança da resistência às raças 3, 9 e 14 do NCS em diferentes populações; (b) identificar e mapear microssatélites ligados ao(s) gene(s) de resistência à estas raças, em uma população de linhagens endogâmicas recombinantes (RILs); (c) validar os marcadores microssatélites identificados, em populações F2 originadas de diferentes fontes de resistência daquelas onde os marcadores foram mapeados; e (d) mapear QTLs para diversas características agronômicas de soja. No estudo de herança foram detectados quatro genes epistáticos para a resistência à raça 14 e três genes epistáticos para as raças 3 e 9 na população de RILs do cruzamento entre Hartwig xY23. Na população F2 do cruzamento Msoy 8001 x Conquista, foi identificado um gene recessivo que condiciona resistência moderada e dois genes recessivos conferindo resistência completa à raça 3. Para a raça 14, na população F2 do cruzamento S5995 x Renascença, foram identificados dois genes recessivos para a resistência moderada. No mapeamento de QTLs nas RILs foram identificados quatro QTLs para a resistência a raça 3 nos grupos de ligação (GL) G, A2, J e M, explicando de 12,9% a 34,8% da variação fenotípica, um QTL para a resistência à raça 9 no GL G, explicando 22% da resistência, e apenas associações significativas entre marcadores e a raça 14, principalmente nos GL G e C2. Para a resistência à raça 3, a seleção assistida realizada com os marcadores mais significativos dos GL G e A2 apresentou resultado similar à seleção fenotípica. Na validação de microssatélites para a seleção assistida de plantas com resistência à 3, confirmou-se a associação de marcadores do GL A2 e G, sendo que juntos os marcadores Satt309 no GL G e GMENOD2B no GL A2 apresentaram 100% de eficiência de seleção (ES). Para a resistência a raça 14, avaliada na população S5995 x Renascença, somente marcadores no GL G apresentaram associação significativa. O Satt309, explicou a maior proporção da variância fenotípica e a melhor combinação de marcadores para a seleção de plantas resistentes a esta raça foi do Satt309 com o Satt356, que juntos proporcionaram 100% de ES. Ganhos similares foram obtidos na seleção assistida e na seleção fenotípica. No estudo de mapeamento de QTLs para características agronômicas, foram mapeados cinco QTLs no GL D1a para as características: dias para o florescimento - R1; altura da planta no florescimento APF; altura da primeira vagem APV; número de vagem por planta NVP; e número de semente por planta NSP; quatro QTLs no GL N para as características: APF; R1; número de nós na maturação NNM; e dias para maturação - R8; e dois QTLs no GL F para NNM e NSP, todos no ano de 2001. Para as avaliações de 2002 foram identificados QTLs nos GL A2 (NNM), C2 (APV, NVP), D1a (R1), N (R8), F (NNM), K (R8, APF e APV), H e J (ambos para NSP). Para a característica produção PRO, avaliada em 2001, foram detectados QTLs nos GL E, G, O e K. QTLs consistentes entre anos foram mapeados para R1 (GL D1a), R8 (GL N) e NNM (GL F). Os intervalos entre os marcadores Satt147 - Satt408 (GL D1a) e Sat_033 Satt237 (GL N), foram significativos para várias características, no ano de 2001, sugerindo efeito pleiotrópico destas regiões para as diferentes características. Os resultados deste trabalho serão úteis para a seleção assistida à resistência ao NCS aos programas brasileiros de melhoramento da soja.Conselho Nacional de Desenvolvimento Científico e Tecnológicoapplication/pdfporUniversidade Federal de ViçosaDoutorado em Genética e MelhoramentoUFVBRGenética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; MeNematóide de cisto da sojaMarcadores molecularesHeterodera glycinesGlycine maxQTLsSoybean cyst nematodeMolecular markersHeterodera glycinesGlycine maxQTLsCNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOSMapeamento e validação de QTLs de resistência ao nematóide de cisto da sojaMapping and validation of QTLs for resistance to soybean cyst nematodeinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf864626https://locus.ufv.br//bitstream/123456789/1296/1/texto%20completo.pdf2ede3e9ebf431f1378ee491696062982MD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain243498https://locus.ufv.br//bitstream/123456789/1296/2/texto%20completo.pdf.txtf5c3f7ff4ecec9cabbbda48fdeae2be7MD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3430https://locus.ufv.br//bitstream/123456789/1296/3/texto%20completo.pdf.jpg0b826993435d23daff199a931d4bb2b6MD53123456789/12962016-04-07 23:02:10.69oai:locus.ufv.br:123456789/1296Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-08T02:02:10LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Mapeamento e validação de QTLs de resistência ao nematóide de cisto da soja
dc.title.alternative.eng.fl_str_mv Mapping and validation of QTLs for resistance to soybean cyst nematode
title Mapeamento e validação de QTLs de resistência ao nematóide de cisto da soja
spellingShingle Mapeamento e validação de QTLs de resistência ao nematóide de cisto da soja
Ferreira, Marcia Flores da Silva
Nematóide de cisto da soja
Marcadores moleculares
Heterodera glycines
Glycine max
QTLs
Soybean cyst nematode
Molecular markers
Heterodera glycines
Glycine max
QTLs
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
title_short Mapeamento e validação de QTLs de resistência ao nematóide de cisto da soja
title_full Mapeamento e validação de QTLs de resistência ao nematóide de cisto da soja
title_fullStr Mapeamento e validação de QTLs de resistência ao nematóide de cisto da soja
title_full_unstemmed Mapeamento e validação de QTLs de resistência ao nematóide de cisto da soja
title_sort Mapeamento e validação de QTLs de resistência ao nematóide de cisto da soja
author Ferreira, Marcia Flores da Silva
author_facet Ferreira, Marcia Flores da Silva
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4760918H6
dc.contributor.author.fl_str_mv Ferreira, Marcia Flores da Silva
dc.contributor.advisor1.fl_str_mv Moreira, Maurílio Alves
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4796105P2
dc.contributor.referee1.fl_str_mv Cruz, Cosme Damião
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4788274A6
dc.contributor.referee2.fl_str_mv Barros, Everaldo Gonçalves de
dc.contributor.referee2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781285J6
dc.contributor.referee3.fl_str_mv Guimarães, Cláudia Teixeira
dc.contributor.referee3Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4782346A3
dc.contributor.referee4.fl_str_mv Caixeta, Eveline Teixeira
dc.contributor.referee4Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4728636Z7
contributor_str_mv Moreira, Maurílio Alves
Cruz, Cosme Damião
Barros, Everaldo Gonçalves de
Guimarães, Cláudia Teixeira
Caixeta, Eveline Teixeira
dc.subject.por.fl_str_mv Nematóide de cisto da soja
Marcadores moleculares
Heterodera glycines
Glycine max
QTLs
topic Nematóide de cisto da soja
Marcadores moleculares
Heterodera glycines
Glycine max
QTLs
Soybean cyst nematode
Molecular markers
Heterodera glycines
Glycine max
QTLs
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
dc.subject.eng.fl_str_mv Soybean cyst nematode
Molecular markers
Heterodera glycines
Glycine max
QTLs
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
description To study soybean (Glycine max (L.) Merrill) resistance to the cyst nematode - NCS (Heterodera glycines Ichinohe) and to help the implantation of the marker assisted selection in breeding programs, the present work was carried with the following objectives: (a) to study the inheritance of resistance to the races 3, 9 and 14 of NCS in different populations; (b) to identify and map microsatellites linked to gene(s) for resistance to those races in a population of recombinant inbred lines (RILs); (c) to validate QTLs in F2 populations originated from different resistance sources from which the QTLs were mapped; and (d) to map QTLs for several agronomic characteristics of soybean. In the inheritance study, four epistatic genes for resistance to the race 14 and three epistatic genes for the races 3 and 9 were detected in the RILs population of the crossing Hartwig x Y23. In F2 population from the crossing Msoy8001 x Conquista, a recessive gene conditioning moderate resistance and two recessive genes giving complete resistance to race 3 were identified. For race 14, two recessive genes for the moderate resistance were identified in the F2 population of the crossing S5995 x Renascença. In mapping of QTLs in RILs, for resistance to NCS, the following were identified: four QTLs for race 3 in the linkage groups (GL) G, A2, J and M, explaining from 12.9% to 34.8% of phenotypic variation; one QTL for resistance to race 9 in GL G, explaining 22% of resistance; and only significant associations between markers and race 14, mainly in the GL G and C2. For race 3, the assisted selection accomplished with the most significant markers of the GL G and A2 showed a result similar to that of the phenotypic selection. In validation of microsatellites for marker assisted selection of plants with resistance to race 3, the association of resistance with markers of GLs A2 and G was confirmed, and together the markers Satt309 in GL G and GMENOD2B in GL A2 showed 100% efficiency in selection (ES). For resistance to race 14, evaluated in the population S5995 x Renascença, only markers in GL G showed significant association with resistance. The Satt309 marker explained the highest proportion of phenotypic variance. The best marker combination for the selection of plants resistant to this race was Satt309 with Satt356, that together provided 100% of ES. In 2001, studying the QTLs mapping for agronomic characteristics, were mapped: five QTLs in GL D1a for the characteristics concerning to days for flowering - R1, plant height in flowering APF, first pod height APV, pod number per plant NVP, and seed number per plant NSP; four QTLs in GL N for the characteristics concerning to APF, R1, node numbers in maturation NNM, and days for maturation - R8; and two QTLs in GL F for node number at maturation NNM, and seed number per plant NSP. In evaluations performed in 2002, the QTLs were identified in GL A2 (NNM), C2 (APV, NVP), D1a (R1), N (R8), F (NNM), K (R8, APF and APV), H and J (both for NSP). For the yield, evaluated in 2001, QTLs were detected in the GLs E, G, O and K. In both years, consistent QTLs were mapped for R1 (GL D1a), R8 (GL N) and NNM (GL F). In 2001, the intervals between the markers Satt147 - Satt408 (GL D1a) and Sat_033 - Satt237 (GL N) were significant for several characteristics, therefore suggesting a pleiotropic effect of these regions for different characteristics. It is worth to emphasize that these results will be useful to the assisted selection for resistance to NCS in the Brazilian soybean breeding programs.
publishDate 2006
dc.date.available.fl_str_mv 2006-12-22
2015-03-26T12:45:21Z
dc.date.issued.fl_str_mv 2006-02-20
dc.date.accessioned.fl_str_mv 2015-03-26T12:45:21Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
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status_str publishedVersion
dc.identifier.citation.fl_str_mv FERREIRA, Marcia Flores da Silva. Mapping and validation of QTLs for resistance to soybean cyst nematode. 2006. 124 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2006.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/1296
identifier_str_mv FERREIRA, Marcia Flores da Silva. Mapping and validation of QTLs for resistance to soybean cyst nematode. 2006. 124 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2006.
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dc.publisher.program.fl_str_mv Doutorado em Genética e Melhoramento
dc.publisher.initials.fl_str_mv UFV
dc.publisher.country.fl_str_mv BR
dc.publisher.department.fl_str_mv Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me
publisher.none.fl_str_mv Universidade Federal de Viçosa
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