Diversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSR

Detalhes bibliográficos
Ano de defesa: 2007
Autor(a) principal: Souza, Giselle Anselmo de
Orientador(a): Oliveira, Luiz Orlando de lattes
Banca de defesa: Santos, Jorge Abdala Dergam dos lattes, Salomão, Tânia Maria Fernandes lattes, Vieira, Rogério Faria lattes
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Viçosa
Programa de Pós-Graduação: Mestrado em Genética e Melhoramento
Departamento: Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me
País: BR
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://locus.ufv.br/handle/123456789/4818
Resumo: The Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) is a species probably originated from Central America. It became an agricultural pest since it was established and continually began to reproduce in stored seeds and later diffused throughout tropical and subtropical regions. In stores, those insects cause damages to the grains, by boring them and giving them an unpleasant flavor, therefore depreciating their commercial value. In seeds, the pest consumes the reserves of the cotyledons, therefore endangering germination. This study was conducted to estimate the genetic diversity in Z. subfasciatus populations, by using the molecular markers ISSR (Inter Simple Sequence Repeat). Twelve populations of Z. subfasciatus amostradas were sampled in eight Brazilian states as totaling 269 individuals, then they were evaluate. Five primers ISSR (UBC 807, UBC 808, UBC 809, UBC 811, UBC 891) were used, whereas a total of 51 polymorphic bands averaging 10 bands by each primer were amplified. The percent polymorphism within each population ranged from 74.51 to 92.16, with an average percentage of 83.82. The expected heterozygozite corrected by Nei in 1978 ranged from 0.2253 to 0.;3281 with some 0.2885 average, whereas the genetic diversity index by Shannon and Weaver (HE) ranged from 0.2908 to 0.4805, as averaging 0.4167. At species level, those two indexes showed the values 0.3636 and 0.5393 respectively. The FST values between the population pairs obtained by molecular variance analysis (AMOVA) ranged from 0.06804 to 0.6165. The genetic distance by Nei used in estimation of the genetic divergence among populations ranged from 0.0563 to 0.3250. The AMOVA allowed for the partition of the genetic variation into two levels: either inside and among populations. Higher genetic variation was observed inside population, with 66% of the total variation. Only 34% genetic variation were observed among populations. The Mantel` test showed low correlation between geographical distance and FST, genetic identity and FST, and between the Nei´genetic distance and FST. According to the results, the following conclusions were drawn: the genetic variability of the species is still considered as low in Brazil, probably due to the recent introduction of the pest; and those Zabrotes subfasciatus populations showed to be not geographically structured in Brazil.
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spelling Souza, Giselle Anselmo dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4775161Y2Martins, Ernane Roniehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4723823P8Oliveira, Luiz Orlando dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781626T2Santos, Jorge Abdala Dergam doshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780131D9Salomão, Tânia Maria Fernandeshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4787017A5Vieira, Rogério Fariahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780045J02015-03-26T13:42:36Z2007-07-242015-03-26T13:42:36Z2007-02-28SOUZA, Giselle Anselmo de. Genetic diversity of Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) evaluated by using ISSR markers. 2007. 54 f. Dissertação (Mestrado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2007.http://locus.ufv.br/handle/123456789/4818The Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) is a species probably originated from Central America. It became an agricultural pest since it was established and continually began to reproduce in stored seeds and later diffused throughout tropical and subtropical regions. In stores, those insects cause damages to the grains, by boring them and giving them an unpleasant flavor, therefore depreciating their commercial value. In seeds, the pest consumes the reserves of the cotyledons, therefore endangering germination. This study was conducted to estimate the genetic diversity in Z. subfasciatus populations, by using the molecular markers ISSR (Inter Simple Sequence Repeat). Twelve populations of Z. subfasciatus amostradas were sampled in eight Brazilian states as totaling 269 individuals, then they were evaluate. Five primers ISSR (UBC 807, UBC 808, UBC 809, UBC 811, UBC 891) were used, whereas a total of 51 polymorphic bands averaging 10 bands by each primer were amplified. The percent polymorphism within each population ranged from 74.51 to 92.16, with an average percentage of 83.82. The expected heterozygozite corrected by Nei in 1978 ranged from 0.2253 to 0.;3281 with some 0.2885 average, whereas the genetic diversity index by Shannon and Weaver (HE) ranged from 0.2908 to 0.4805, as averaging 0.4167. At species level, those two indexes showed the values 0.3636 and 0.5393 respectively. The FST values between the population pairs obtained by molecular variance analysis (AMOVA) ranged from 0.06804 to 0.6165. The genetic distance by Nei used in estimation of the genetic divergence among populations ranged from 0.0563 to 0.3250. The AMOVA allowed for the partition of the genetic variation into two levels: either inside and among populations. Higher genetic variation was observed inside population, with 66% of the total variation. Only 34% genetic variation were observed among populations. The Mantel` test showed low correlation between geographical distance and FST, genetic identity and FST, and between the Nei´genetic distance and FST. According to the results, the following conclusions were drawn: the genetic variability of the species is still considered as low in Brazil, probably due to the recent introduction of the pest; and those Zabrotes subfasciatus populations showed to be not geographically structured in Brazil.Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae), espécie originária provavelmente na América Central, se tornou uma praga agrícola quando se estabeleceu e passou a se reproduzir continuamente em sementes armazenadas, difundindo-se posteriormente pelas regiões tropicais e subtropicais. Em armazéns, esses insetos causam danos aos grãos, perfurando-os e conferindo-lhes sabor desagradável, depreciando o seu valor comercial. Nas sementes, a praga consome as reservas dos cotilédones, comprometendo a germinação. O objetivo deste trabalho foi estimar a diversidade genética de populações de Z. subfasciatus por meio de marcadores moleculares ISSR (Inter Simple Sequence Repeat). Foram avaliadas 12 populações de Z. subfasciatus, amostradas em oito estados brasileiros, totalizando 269 indivíduos. Cinco primers ISSR foram utilizados (UBC 807, UBC 808, UBC 809, UBC 811, UBC 891), sendo amplificadas um total de 51 bandas polimórficas com média de 10 bandas por primer. A porcentagem de polimorfismo dentro de cada população variou de 74,51 a 92,16, com porcentagem média de 83,82. A heterozigosidade esperada corrigida de Nei (HE), variou de 0,2253 a 0,3281, com média de 0,2885 e o índice de diversidade genética de de Shannon e Weaver (I) variou de 0,2908 a 0,4805, com média de 0,4167. Em nível de espécie, estes dois índices apresentaram valores de 0,3636 e 0,5393 respectivamente. Os valores de FST entre pares de populações obtidos pela análise de variância molecular (AMOVA) variaram de 0,06804 a 0,6165. A distância genética de Nei (1978), usada para estimar a divergência genética entre populações, variou de 0,0563 a 0,3250. A AMOVA permitiu uma partição da variação genética em dois níveis: dentro de populações e entre populações. Foi observada maior variação genética dentro da população, com 66% da variação total. Apenas 34% da variação genética foi observada entre populações. O teste de Mantel revelou baixa correlação entre distância geográfica e FST, identidade genética e FST e entre distância genética de Nei e FST. Pode-se concluir que a variabilidade genética da espécie ainda é considerada baixa no Brasil, provavelmente devido à introdução recente da praga. As populações de Zabrotes subfasciatus avaliadas não se apresentam geograficamente estruturadas no Brasil.Conselho Nacional de Desenvolvimento Científico e Tecnológicoapplication/pdfporUniversidade Federal de ViçosaMestrado em Genética e MelhoramentoUFVBRGenética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; MeMarcadores molecularesZabrotes subfasciatusBruquídeoMolecular markersZabrotes subfasciatusCNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOSDiversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSRGenetic diversity of Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) evaluated by using ISSR markersinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf696310https://locus.ufv.br//bitstream/123456789/4818/1/texto%20completo.pdf885479e14190b04344238aca73a62d1dMD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain75184https://locus.ufv.br//bitstream/123456789/4818/2/texto%20completo.pdf.txta1615eed7e92967d099ce31933078d8aMD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3708https://locus.ufv.br//bitstream/123456789/4818/3/texto%20completo.pdf.jpg2dc0f6d6e6941e2fd478a1fde0b2562fMD53123456789/48182016-04-10 23:17:05.914oai:locus.ufv.br:123456789/4818Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-11T02:17:05LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Diversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSR
dc.title.alternative.eng.fl_str_mv Genetic diversity of Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) evaluated by using ISSR markers
title Diversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSR
spellingShingle Diversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSR
Souza, Giselle Anselmo de
Marcadores moleculares
Zabrotes subfasciatus
Bruquídeo
Molecular markers
Zabrotes subfasciatus
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
title_short Diversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSR
title_full Diversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSR
title_fullStr Diversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSR
title_full_unstemmed Diversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSR
title_sort Diversidade genética de Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) avaliada com marcadores ISSR
author Souza, Giselle Anselmo de
author_facet Souza, Giselle Anselmo de
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4775161Y2
dc.contributor.author.fl_str_mv Souza, Giselle Anselmo de
dc.contributor.advisor-co1.fl_str_mv Martins, Ernane Ronie
dc.contributor.advisor-co1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4723823P8
dc.contributor.advisor1.fl_str_mv Oliveira, Luiz Orlando de
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781626T2
dc.contributor.referee1.fl_str_mv Santos, Jorge Abdala Dergam dos
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780131D9
dc.contributor.referee2.fl_str_mv Salomão, Tânia Maria Fernandes
dc.contributor.referee2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4787017A5
dc.contributor.referee3.fl_str_mv Vieira, Rogério Faria
dc.contributor.referee3Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780045J0
contributor_str_mv Martins, Ernane Ronie
Oliveira, Luiz Orlando de
Santos, Jorge Abdala Dergam dos
Salomão, Tânia Maria Fernandes
Vieira, Rogério Faria
dc.subject.por.fl_str_mv Marcadores moleculares
Zabrotes subfasciatus
Bruquídeo
topic Marcadores moleculares
Zabrotes subfasciatus
Bruquídeo
Molecular markers
Zabrotes subfasciatus
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
dc.subject.eng.fl_str_mv Molecular markers
Zabrotes subfasciatus
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
description The Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) is a species probably originated from Central America. It became an agricultural pest since it was established and continually began to reproduce in stored seeds and later diffused throughout tropical and subtropical regions. In stores, those insects cause damages to the grains, by boring them and giving them an unpleasant flavor, therefore depreciating their commercial value. In seeds, the pest consumes the reserves of the cotyledons, therefore endangering germination. This study was conducted to estimate the genetic diversity in Z. subfasciatus populations, by using the molecular markers ISSR (Inter Simple Sequence Repeat). Twelve populations of Z. subfasciatus amostradas were sampled in eight Brazilian states as totaling 269 individuals, then they were evaluate. Five primers ISSR (UBC 807, UBC 808, UBC 809, UBC 811, UBC 891) were used, whereas a total of 51 polymorphic bands averaging 10 bands by each primer were amplified. The percent polymorphism within each population ranged from 74.51 to 92.16, with an average percentage of 83.82. The expected heterozygozite corrected by Nei in 1978 ranged from 0.2253 to 0.;3281 with some 0.2885 average, whereas the genetic diversity index by Shannon and Weaver (HE) ranged from 0.2908 to 0.4805, as averaging 0.4167. At species level, those two indexes showed the values 0.3636 and 0.5393 respectively. The FST values between the population pairs obtained by molecular variance analysis (AMOVA) ranged from 0.06804 to 0.6165. The genetic distance by Nei used in estimation of the genetic divergence among populations ranged from 0.0563 to 0.3250. The AMOVA allowed for the partition of the genetic variation into two levels: either inside and among populations. Higher genetic variation was observed inside population, with 66% of the total variation. Only 34% genetic variation were observed among populations. The Mantel` test showed low correlation between geographical distance and FST, genetic identity and FST, and between the Nei´genetic distance and FST. According to the results, the following conclusions were drawn: the genetic variability of the species is still considered as low in Brazil, probably due to the recent introduction of the pest; and those Zabrotes subfasciatus populations showed to be not geographically structured in Brazil.
publishDate 2007
dc.date.available.fl_str_mv 2007-07-24
2015-03-26T13:42:36Z
dc.date.issued.fl_str_mv 2007-02-28
dc.date.accessioned.fl_str_mv 2015-03-26T13:42:36Z
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dc.identifier.citation.fl_str_mv SOUZA, Giselle Anselmo de. Genetic diversity of Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) evaluated by using ISSR markers. 2007. 54 f. Dissertação (Mestrado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2007.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/4818
identifier_str_mv SOUZA, Giselle Anselmo de. Genetic diversity of Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae) evaluated by using ISSR markers. 2007. 54 f. Dissertação (Mestrado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2007.
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