Identificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específica

Detalhes bibliográficos
Ano de defesa: 2007
Autor(a) principal: Freitas, Rejane do Livramento
Orientador(a): Fontes, Elizabeth Pacheco Batista lattes
Banca de defesa: Fietto, Luciano Gomes lattes, Carvalho, Claudine Márcia lattes
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Viçosa
Programa de Pós-Graduação: Mestrado em Fisiologia Vegetal
Departamento: Controle da maturação e senescência em órgãos perecíveis; Fisiologia molecular de plantas superiores
País: BR
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://locus.ufv.br/handle/123456789/4350
Resumo: The soybean SBP2 (sucrose binding protein) promoter is capable to drive vascular tissue-specific expression of reporter genes in tobacco transgenic lines. This vascular-specific activity of the SBP2 promoter is confined to a distal region (-2000 to -700 sequences) designated CRD-A (cis-regulatory domain-A). Here, we first confirmed the tissue-specific activity of CRD-A through gain-of-function experiments, in which the CRD-A sequences were directly fused to 5´end of GUS cDNA, -136pSBP2-GUS and -92pSBP2-GUS constructs. In tobacco, CRD-A was able to reduce GUS activity in all organs analyzed, recapitulating in some cases the tissue-specific pattern of the full promoter. In addition, CRD-A promoted GUS transcription in the absence of the proximal TATA-containing region, which suggests that CRD-A may contain cis-regulatory elements to sustain basal transcription. In fact, this region (-2000 a -700) harbors several TATA box-like sequences, positions -790, -783 and -761, that potentially may function as alternative TATA boxes. To delimit the cis-regulatory elements responsible for the tissue-specific activity of SBP2 promoter, the -2000 to -700 sequence was divided into five fragments, which were fused to -92pSBP2-GUS construct and used to obtain transgenic lines. Histochemical analysis revealed that all the CRDA sub-fragments reduced the SBP2 promoter activity, as their fusion to the 5 end of -92pSBP2 altered its constitutive expression pattern. These results identified the presence of several potentially cis-regulatory domains. The region encompassing the sequences -1765 to -945 may contain strong shoot apex expression-repressing elements, capable to totally abolish expression, whereas the region -944 to -705 may harbor weaker repressing elements that restricted GUS expression to the vascular tissue. We also found several root expression silencers, operating in the root meristem (-1765 to -705) and in the root elongation zone (-1765 to -1485 and -1211 to -945). Furthermore, the region delimited by positions -1765 to -1485 also exhibited a strong root expressionrepressing element whose effect may be attenuated by cis-regulatory elements present in the -1485 to -705 region. Finally, a cis-element that confines GUS expression to the inner phloem of stem was identified in the region delimited by positions -1485 to -1212. The function of the identified cis-elements was evaluated through electrophoretic mobility shift assay (EMSA) that revealed sequence-specific interactions between putative transfactors from soybean and tobacco nuclear extracts and the -1765/-1485 (fragII) fragment from GmSBP2. To determine whether the SBP2 protein accumulation correlated with the tissuespecific promoter activity, a SBP2-GFP fusion was expressed in tobacco transgenic lines under the control of SBP2 promoter. Fluorescence analysis revealed that the SBP2 protein was, indeed, located in the vascular tissue, which was consistent with SBP2 promoter activity and the involvement of SBP2 in physiological process dependent of sucrose translocation.
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spelling Freitas, Rejane do Livramentohttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4737720E9Almeida, Andréa Miyasaka dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4792501H4Loureiro, Marcelo Ehlershttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780851Y3Fontes, Elizabeth Pacheco Batistahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781848H2Fietto, Luciano Gomeshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763824H8Carvalho, Claudine Márciahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4794965T62015-03-26T13:36:46Z2007-07-192015-03-26T13:36:46Z2007-03-29FREITAS, Rejane do Livramento. Identification of regions on the soybean SBP2 (sucrose binding protein) promotor that confer tissue-specific expression. 2007. 61 f. Dissertação (Mestrado em Controle da maturação e senescência em órgãos perecíveis; Fisiologia molecular de plantas superiores) - Universidade Federal de Viçosa, Viçosa, 2007.http://locus.ufv.br/handle/123456789/4350The soybean SBP2 (sucrose binding protein) promoter is capable to drive vascular tissue-specific expression of reporter genes in tobacco transgenic lines. This vascular-specific activity of the SBP2 promoter is confined to a distal region (-2000 to -700 sequences) designated CRD-A (cis-regulatory domain-A). Here, we first confirmed the tissue-specific activity of CRD-A through gain-of-function experiments, in which the CRD-A sequences were directly fused to 5´end of GUS cDNA, -136pSBP2-GUS and -92pSBP2-GUS constructs. In tobacco, CRD-A was able to reduce GUS activity in all organs analyzed, recapitulating in some cases the tissue-specific pattern of the full promoter. In addition, CRD-A promoted GUS transcription in the absence of the proximal TATA-containing region, which suggests that CRD-A may contain cis-regulatory elements to sustain basal transcription. In fact, this region (-2000 a -700) harbors several TATA box-like sequences, positions -790, -783 and -761, that potentially may function as alternative TATA boxes. To delimit the cis-regulatory elements responsible for the tissue-specific activity of SBP2 promoter, the -2000 to -700 sequence was divided into five fragments, which were fused to -92pSBP2-GUS construct and used to obtain transgenic lines. Histochemical analysis revealed that all the CRDA sub-fragments reduced the SBP2 promoter activity, as their fusion to the 5 end of -92pSBP2 altered its constitutive expression pattern. These results identified the presence of several potentially cis-regulatory domains. The region encompassing the sequences -1765 to -945 may contain strong shoot apex expression-repressing elements, capable to totally abolish expression, whereas the region -944 to -705 may harbor weaker repressing elements that restricted GUS expression to the vascular tissue. We also found several root expression silencers, operating in the root meristem (-1765 to -705) and in the root elongation zone (-1765 to -1485 and -1211 to -945). Furthermore, the region delimited by positions -1765 to -1485 also exhibited a strong root expressionrepressing element whose effect may be attenuated by cis-regulatory elements present in the -1485 to -705 region. Finally, a cis-element that confines GUS expression to the inner phloem of stem was identified in the region delimited by positions -1485 to -1212. The function of the identified cis-elements was evaluated through electrophoretic mobility shift assay (EMSA) that revealed sequence-specific interactions between putative transfactors from soybean and tobacco nuclear extracts and the -1765/-1485 (fragII) fragment from GmSBP2. To determine whether the SBP2 protein accumulation correlated with the tissuespecific promoter activity, a SBP2-GFP fusion was expressed in tobacco transgenic lines under the control of SBP2 promoter. Fluorescence analysis revealed that the SBP2 protein was, indeed, located in the vascular tissue, which was consistent with SBP2 promoter activity and the involvement of SBP2 in physiological process dependent of sucrose translocation.O promotor do gene SBP2 (sucrose binding protein) de soja é capaz de dirigir a expressão tecido vascular-específica de genes repórteres em plantas transgênicas de tabaco. Esta regulação se deve à presença de domínios cisregulatórios distais (CRD-A, posição -2000 a -700) presentes no promotor. Neste trabalho, a atividade tecido-específica de CRD-A foi confirmada por meio de experimentos de ganho-de-função, nos quais o fragmento CRD-A foi diretamente fusionado ao gene repórter GUS e às construções -136pSBP2-GUS e -92pSBP2-GUS e sua atividade avaliada no sistema heterólogo de tabaco. CRDA foi capaz de reduzir a atividade de GUS em todos os órgãos analisados, restaurando, em alguns casos, o padrão tecido-específico do promotor completo. Além disso, observou-se que CRD-A é capaz de promover a transcrição de GUS, independente de promotor mínimo, indicando a presença de cis-elementos capazes de promoverem a transcrição basal. De fato, nessa região (-2000 a -700) foram identificados vários elementos TATA box, localizados nas posições -790, -783 e -761, que podem potencialmente funcionar como TATA boxes alternativos. No intuito de delimitar os cis-elementos responsáveis pelo padrão tecido-específico do promotor SBP2, a seqüência -2000 a -700 foi dividida em cinco fragmentos, os quais foram inseridos na construção -92pSBP2-GUS, e utilizados para obtenção de plantas transgênicas. Análises histoquímicas revelaram que todos os fragmentos foram capazes de reduzir a atividade do promotor SBP2, uma vez que sua inserção na extremidade 5 de -92pSBP2 alterou o padrão de expressão constitutiva do mesmo. Com base nestes resultados, diversas regiões potencialmente regulatórias foram identificadas. A região compreendida entre -1765 e -945 deve conter fortes elementos repressores para o ápice caulinar, capazes de abolir totalmente a atividade do promotor, enquanto que a região entre -944 e -705 demonstrou conter elementos repressores mais fracos, que restringiram a expressão ao tecido vascular. Foram encontrados vários elementos silenciadores para a raiz, tanto para o meristema radicular (região entre -1765 e -705), quanto para a zona de alongamento (de -1765 a -1485 e de -1211 a -945). Além disso, a região de -1765 a -1485 também apresenta um forte repressor para raiz, cujo efeito deve ser atenuado por ciselementos presentes entre -1485 e -705. Por fim, foi identificado um elemento responsável por restringir a expressão apenas ao floema interno no caule, na região entre -1485 e -1212. A funcionalidade dos cis-elementos identificados foi avaliada através do ensaio de mudança na mobilidade eletroforética (EMSA), tendo sido observada a interação seqüência-específica entre possíveis transfatores presentes em extratos nucleares de soja e de tabaco e o fragmento -1765/-1485 (fragII) de GmSBP2. A fim de verificar se o acúmulo da proteína SBP2 correlaciona-se com a atividade do promotor em tecidos específicos, foi obtida a proteína quimérica SBP2-GFP, sob o controle do promotor SBP2, em tabacos transgênicos. A análise de fluorescência revelou que a proteína SBP2 está, de fato, localizada na região de tecido vascular, consistente com o padrão de atividade do gene repórter e com seu envolvimento nos processos fisiológicos dependentes de translocação de sacarose.Coordenação de Aperfeiçoamento de Pessoal de Nível Superiorapplication/pdfporUniversidade Federal de ViçosaMestrado em Fisiologia VegetalUFVBRControle da maturação e senescência em órgãos perecíveis; Fisiologia molecular de plantas superioresSucrose binding proteinPromotorTecido-especificidadeSucrose binding proteinPromotorTissue-specificCNPQ::CIENCIAS BIOLOGICASIdentificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específicaIdentification of regions on the soybean SBP2 (sucrose binding protein) promotor that confer tissue-specific expressioninfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf3795682https://locus.ufv.br//bitstream/123456789/4350/1/texto%20completo.pdf12bec11cea96f50faf5ddfa5a06024dcMD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain95282https://locus.ufv.br//bitstream/123456789/4350/2/texto%20completo.pdf.txt3211c88b0da4bca162cee96d385fefddMD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3641https://locus.ufv.br//bitstream/123456789/4350/3/texto%20completo.pdf.jpgcae4acdc732de19b72064e5515efe5f7MD53123456789/43502016-04-10 23:07:56.717oai:locus.ufv.br:123456789/4350Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-11T02:07:56LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Identificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específica
dc.title.alternative.eng.fl_str_mv Identification of regions on the soybean SBP2 (sucrose binding protein) promotor that confer tissue-specific expression
title Identificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específica
spellingShingle Identificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específica
Freitas, Rejane do Livramento
Sucrose binding protein
Promotor
Tecido-especificidade
Sucrose binding protein
Promotor
Tissue-specific
CNPQ::CIENCIAS BIOLOGICAS
title_short Identificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específica
title_full Identificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específica
title_fullStr Identificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específica
title_full_unstemmed Identificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específica
title_sort Identificação de regiões no promotor do gene SBP2 (sucrose binding protein) de soja que conferem expressão espacial específica
author Freitas, Rejane do Livramento
author_facet Freitas, Rejane do Livramento
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4737720E9
dc.contributor.author.fl_str_mv Freitas, Rejane do Livramento
dc.contributor.advisor-co1.fl_str_mv Almeida, Andréa Miyasaka de
dc.contributor.advisor-co1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4792501H4
dc.contributor.advisor-co2.fl_str_mv Loureiro, Marcelo Ehlers
dc.contributor.advisor-co2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780851Y3
dc.contributor.advisor1.fl_str_mv Fontes, Elizabeth Pacheco Batista
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781848H2
dc.contributor.referee1.fl_str_mv Fietto, Luciano Gomes
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763824H8
dc.contributor.referee2.fl_str_mv Carvalho, Claudine Márcia
dc.contributor.referee2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4794965T6
contributor_str_mv Almeida, Andréa Miyasaka de
Loureiro, Marcelo Ehlers
Fontes, Elizabeth Pacheco Batista
Fietto, Luciano Gomes
Carvalho, Claudine Márcia
dc.subject.por.fl_str_mv Sucrose binding protein
Promotor
Tecido-especificidade
topic Sucrose binding protein
Promotor
Tecido-especificidade
Sucrose binding protein
Promotor
Tissue-specific
CNPQ::CIENCIAS BIOLOGICAS
dc.subject.eng.fl_str_mv Sucrose binding protein
Promotor
Tissue-specific
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS
description The soybean SBP2 (sucrose binding protein) promoter is capable to drive vascular tissue-specific expression of reporter genes in tobacco transgenic lines. This vascular-specific activity of the SBP2 promoter is confined to a distal region (-2000 to -700 sequences) designated CRD-A (cis-regulatory domain-A). Here, we first confirmed the tissue-specific activity of CRD-A through gain-of-function experiments, in which the CRD-A sequences were directly fused to 5´end of GUS cDNA, -136pSBP2-GUS and -92pSBP2-GUS constructs. In tobacco, CRD-A was able to reduce GUS activity in all organs analyzed, recapitulating in some cases the tissue-specific pattern of the full promoter. In addition, CRD-A promoted GUS transcription in the absence of the proximal TATA-containing region, which suggests that CRD-A may contain cis-regulatory elements to sustain basal transcription. In fact, this region (-2000 a -700) harbors several TATA box-like sequences, positions -790, -783 and -761, that potentially may function as alternative TATA boxes. To delimit the cis-regulatory elements responsible for the tissue-specific activity of SBP2 promoter, the -2000 to -700 sequence was divided into five fragments, which were fused to -92pSBP2-GUS construct and used to obtain transgenic lines. Histochemical analysis revealed that all the CRDA sub-fragments reduced the SBP2 promoter activity, as their fusion to the 5 end of -92pSBP2 altered its constitutive expression pattern. These results identified the presence of several potentially cis-regulatory domains. The region encompassing the sequences -1765 to -945 may contain strong shoot apex expression-repressing elements, capable to totally abolish expression, whereas the region -944 to -705 may harbor weaker repressing elements that restricted GUS expression to the vascular tissue. We also found several root expression silencers, operating in the root meristem (-1765 to -705) and in the root elongation zone (-1765 to -1485 and -1211 to -945). Furthermore, the region delimited by positions -1765 to -1485 also exhibited a strong root expressionrepressing element whose effect may be attenuated by cis-regulatory elements present in the -1485 to -705 region. Finally, a cis-element that confines GUS expression to the inner phloem of stem was identified in the region delimited by positions -1485 to -1212. The function of the identified cis-elements was evaluated through electrophoretic mobility shift assay (EMSA) that revealed sequence-specific interactions between putative transfactors from soybean and tobacco nuclear extracts and the -1765/-1485 (fragII) fragment from GmSBP2. To determine whether the SBP2 protein accumulation correlated with the tissuespecific promoter activity, a SBP2-GFP fusion was expressed in tobacco transgenic lines under the control of SBP2 promoter. Fluorescence analysis revealed that the SBP2 protein was, indeed, located in the vascular tissue, which was consistent with SBP2 promoter activity and the involvement of SBP2 in physiological process dependent of sucrose translocation.
publishDate 2007
dc.date.available.fl_str_mv 2007-07-19
2015-03-26T13:36:46Z
dc.date.issued.fl_str_mv 2007-03-29
dc.date.accessioned.fl_str_mv 2015-03-26T13:36:46Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv FREITAS, Rejane do Livramento. Identification of regions on the soybean SBP2 (sucrose binding protein) promotor that confer tissue-specific expression. 2007. 61 f. Dissertação (Mestrado em Controle da maturação e senescência em órgãos perecíveis; Fisiologia molecular de plantas superiores) - Universidade Federal de Viçosa, Viçosa, 2007.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/4350
identifier_str_mv FREITAS, Rejane do Livramento. Identification of regions on the soybean SBP2 (sucrose binding protein) promotor that confer tissue-specific expression. 2007. 61 f. Dissertação (Mestrado em Controle da maturação e senescência em órgãos perecíveis; Fisiologia molecular de plantas superiores) - Universidade Federal de Viçosa, Viçosa, 2007.
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dc.publisher.initials.fl_str_mv UFV
dc.publisher.country.fl_str_mv BR
dc.publisher.department.fl_str_mv Controle da maturação e senescência em órgãos perecíveis; Fisiologia molecular de plantas superiores
publisher.none.fl_str_mv Universidade Federal de Viçosa
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