Variabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporina

Detalhes bibliográficos
Ano de defesa: 2007
Autor(a) principal: Martins, Ricardo Brainer
Orientador(a): Maffia, Luiz Antônio lattes
Banca de defesa: Alfenas, Acelino Couto lattes, Teixeira, Hudson lattes
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Viçosa
Programa de Pós-Graduação: Doutorado em Fitopatologia
Departamento: Etiologia; Epidemiologia; Controle
País: BR
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://locus.ufv.br/handle/123456789/1078
Resumo: The Cercospora leaf spot is considered an emergent disease in the coffee culture. However there is little information about the biology and ecology of the causal agent, Cercospora coffeicola. The aim of this study was to characterize the variability of pathogens populations associated to coffee trees in both conventional and organic systems in three Minas Gerais regions. A hierarchical sampling plan was performed with the following levels: 1. State geographical regions (Sul, Triângulo, and Mata); 2.Crop system (organic and conventional); 3. Plantings. Out of 420 monosporic isolates collected, 90 were randomly selected. To characterize the variability, two markers were used: vegetative compatibility and production of cercosporin in vitro. Vegetative compatibility was estimated by the use of nit mutants, auxotrophic mutants unable to use nitrate as the only nitrogen source. Twenty eight vegetative compatibility groups (VCG) were identified through complementary tests. Out of the 28 VCG s, 10 were multimembers and included 56,6% of the isolates and 18 included just one isolate that were restricted to specific plantings. Considering the distribution of VCG s among the levels studied, a variance analysis was implemented and a diversity index was estimated. Higher part of variation found (92.05%) was attributed to isolate. There was no difference in diversity for the levels we analyzed. Members of one VCG occurred in the three regions, whereas members of other groups occurred in one or two regions. At in vitro assays, the production of cercosporin was evaluated, and the concentration ranged from 1.71 to 35.327 μMol/isolate. The percentage of total variance among isolates was 1.9, 7.8, and 48.9% for region, plantings and isolates levels, respectively. No effect of crop system (P=0.88) was detected in the variability. Dissimilarity measures were estimated among isolates (Malahanobis index) and the Unweighted pair-group method with arithmetical averages (UPGMA) was performed to determine groups of similar cercosporin production (CPG). Isolates with an low and median levels of production of predominated in the population. Considering the markers used, there are evidences that the studied population has a high variability and the region, crop system and plantings have no effect on the variability.
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spelling Martins, Ricardo Brainerhttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4709959J7Mizubuti, Eduardo Seiti Gomidehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4785633J8Dias, Luiz Antonio dos Santoshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763137P6Maffia, Luiz Antôniohttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783229P9Alfenas, Acelino Coutohttp://lattes.cnpq.br/2514320654462590Teixeira, Hudsonhttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4791813Z12015-03-26T12:42:08Z2007-12-132015-03-26T12:42:08Z2007-05-04MARTINS, Ricardo Brainer. Variability of Cercospora coffeicola in Minas Gerais State, Brazil, characterized by vegetative compatibility and production of cercosporina. 2007. 99 f. Tese (Doutorado em Etiologia; Epidemiologia; Controle) - Universidade Federal de Viçosa, Viçosa, 2007.http://locus.ufv.br/handle/123456789/1078The Cercospora leaf spot is considered an emergent disease in the coffee culture. However there is little information about the biology and ecology of the causal agent, Cercospora coffeicola. The aim of this study was to characterize the variability of pathogens populations associated to coffee trees in both conventional and organic systems in three Minas Gerais regions. A hierarchical sampling plan was performed with the following levels: 1. State geographical regions (Sul, Triângulo, and Mata); 2.Crop system (organic and conventional); 3. Plantings. Out of 420 monosporic isolates collected, 90 were randomly selected. To characterize the variability, two markers were used: vegetative compatibility and production of cercosporin in vitro. Vegetative compatibility was estimated by the use of nit mutants, auxotrophic mutants unable to use nitrate as the only nitrogen source. Twenty eight vegetative compatibility groups (VCG) were identified through complementary tests. Out of the 28 VCG s, 10 were multimembers and included 56,6% of the isolates and 18 included just one isolate that were restricted to specific plantings. Considering the distribution of VCG s among the levels studied, a variance analysis was implemented and a diversity index was estimated. Higher part of variation found (92.05%) was attributed to isolate. There was no difference in diversity for the levels we analyzed. Members of one VCG occurred in the three regions, whereas members of other groups occurred in one or two regions. At in vitro assays, the production of cercosporin was evaluated, and the concentration ranged from 1.71 to 35.327 μMol/isolate. The percentage of total variance among isolates was 1.9, 7.8, and 48.9% for region, plantings and isolates levels, respectively. No effect of crop system (P=0.88) was detected in the variability. Dissimilarity measures were estimated among isolates (Malahanobis index) and the Unweighted pair-group method with arithmetical averages (UPGMA) was performed to determine groups of similar cercosporin production (CPG). Isolates with an low and median levels of production of predominated in the population. Considering the markers used, there are evidences that the studied population has a high variability and the region, crop system and plantings have no effect on the variability.A cercosporiose é considerada uma doença emergente na cafeicultura. Entretanto, há pouca informação sobre a biologia e ecologia do agente etiológico, Cercospora coffeicola. Para caracterizar a variabilidade de populações do patógeno associadas a cafeeiros nos sistemas convencional e orgânico em três regiões de Minas Gerais, efetuou-se um plano de amostragem hierarquizado com os seguintes níveis: 1. Região (Sul, Triângulo e Mata); 2. Sistema de cultivo (orgânico e convencional); 3. Lavouras. De 420 isolados monospóricos obtidos, selecionaram-se, aleatoriamente, 90 para o estudo. Para caracterizar a variabilidade, utilizaram-se dois marcadores: compatibilidade vegetativa e produção in vitro de cercosporina. Avaliou-se a compatibilidade vegetativa pelo emprego de mutantes auxotróficos incapazes de utilizar nitrato como única fonte de nitrogênio (Mutantes nit). Por meio de testes de complementação, identificaram-se 28 grupos de compatibilidade vegetativa (GCV). Dos 28, 10 foram multimembros, com 56,6% dos isolados, enquanto 18 constituíram-se por apenas um isolado, sendo restritos a lavouras específicas. Com base na distribuição dos GCVs entre os níveis estudados, efetuou-se análise de variância e estimaram-se índices de diversidade. Atribuiu-se a maior parte da variação encontrada (92,05%) a isolado. Não houve diferença quanto à diversidade para os níveis estudados. Apenas membros de um GCV ocorreram nas três regiões, e os membros dos demais GCVs ocorreram em uma ou duas regiões. Em ensaios in vitro, avaliou-se a produção de cercosporina, que variou de 1,71 a 35,327 μMol por isolado. O percentual em relação à variância total entre isolados foi de 1,9; 7,8 e 48,9% para os níveis região, lavoura e isolados, respectivamente. Não se detectou efeito do sistema de cultivo (P=0,88) na variabilidade. Estimaram-se medidas de dissimilaridade entre isolados (índice de Malahanobis) e procedeu-se à análise de agrupamento (UPGMA) para definir grupos de produção similar de cercosporina (GPC). Isolados com produção média e mínima de cercosporina predominaram na população. Com base nos marcadores utilizados, há evidências de que a população estudada tem alta variabilidade, a qual não é afetada por região, sistema de cultivo e lavoura.Conselho Nacional de Desenvolvimento Científico e Tecnológicoapplication/pdfporUniversidade Federal de ViçosaDoutorado em FitopatologiaUFVBREtiologia; Epidemiologia; ControleCaféCercosporioseMutantes nitDiversidade genéticaMarcadores genéticosCoffeeCercospora coffeicolaNit mutantsGenetic diversityMolecular markersCNPQ::CIENCIAS AGRARIAS::AGRONOMIA::FITOSSANIDADE::FITOPATOLOGIAVariabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporinaVariability of Cercospora coffeicola in Minas Gerais State, Brazil, characterized by vegetative compatibility and production of cercosporinainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf1148292https://locus.ufv.br//bitstream/123456789/1078/1/texto%20completo.pdfe4beee492c601fee12a006a5c5f85e84MD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain159989https://locus.ufv.br//bitstream/123456789/1078/2/texto%20completo.pdf.txte522bfb2ddcf5d9ee522fa6700ffd46dMD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3610https://locus.ufv.br//bitstream/123456789/1078/3/texto%20completo.pdf.jpg2b13d7f0677789341ecdbf4a4bc528d6MD53123456789/10782016-04-06 23:17:53.051oai:locus.ufv.br:123456789/1078Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-07T02:17:53LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Variabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporina
dc.title.alternative.eng.fl_str_mv Variability of Cercospora coffeicola in Minas Gerais State, Brazil, characterized by vegetative compatibility and production of cercosporina
title Variabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporina
spellingShingle Variabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporina
Martins, Ricardo Brainer
Café
Cercosporiose
Mutantes nit
Diversidade genética
Marcadores genéticos
Coffee
Cercospora coffeicola
Nit mutants
Genetic diversity
Molecular markers
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA::FITOSSANIDADE::FITOPATOLOGIA
title_short Variabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporina
title_full Variabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporina
title_fullStr Variabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporina
title_full_unstemmed Variabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporina
title_sort Variabilidade de Cercospora coffeicola em Minas Gerais com base em compatibilidade vegetativa e produção de cercosporina
author Martins, Ricardo Brainer
author_facet Martins, Ricardo Brainer
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4709959J7
dc.contributor.author.fl_str_mv Martins, Ricardo Brainer
dc.contributor.advisor-co1.fl_str_mv Mizubuti, Eduardo Seiti Gomide
dc.contributor.advisor-co1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4785633J8
dc.contributor.advisor-co2.fl_str_mv Dias, Luiz Antonio dos Santos
dc.contributor.advisor-co2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763137P6
dc.contributor.advisor1.fl_str_mv Maffia, Luiz Antônio
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783229P9
dc.contributor.referee1.fl_str_mv Alfenas, Acelino Couto
dc.contributor.referee1Lattes.fl_str_mv http://lattes.cnpq.br/2514320654462590
dc.contributor.referee2.fl_str_mv Teixeira, Hudson
dc.contributor.referee2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4791813Z1
contributor_str_mv Mizubuti, Eduardo Seiti Gomide
Dias, Luiz Antonio dos Santos
Maffia, Luiz Antônio
Alfenas, Acelino Couto
Teixeira, Hudson
dc.subject.por.fl_str_mv Café
Cercosporiose
Mutantes nit
Diversidade genética
Marcadores genéticos
topic Café
Cercosporiose
Mutantes nit
Diversidade genética
Marcadores genéticos
Coffee
Cercospora coffeicola
Nit mutants
Genetic diversity
Molecular markers
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA::FITOSSANIDADE::FITOPATOLOGIA
dc.subject.eng.fl_str_mv Coffee
Cercospora coffeicola
Nit mutants
Genetic diversity
Molecular markers
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS AGRARIAS::AGRONOMIA::FITOSSANIDADE::FITOPATOLOGIA
description The Cercospora leaf spot is considered an emergent disease in the coffee culture. However there is little information about the biology and ecology of the causal agent, Cercospora coffeicola. The aim of this study was to characterize the variability of pathogens populations associated to coffee trees in both conventional and organic systems in three Minas Gerais regions. A hierarchical sampling plan was performed with the following levels: 1. State geographical regions (Sul, Triângulo, and Mata); 2.Crop system (organic and conventional); 3. Plantings. Out of 420 monosporic isolates collected, 90 were randomly selected. To characterize the variability, two markers were used: vegetative compatibility and production of cercosporin in vitro. Vegetative compatibility was estimated by the use of nit mutants, auxotrophic mutants unable to use nitrate as the only nitrogen source. Twenty eight vegetative compatibility groups (VCG) were identified through complementary tests. Out of the 28 VCG s, 10 were multimembers and included 56,6% of the isolates and 18 included just one isolate that were restricted to specific plantings. Considering the distribution of VCG s among the levels studied, a variance analysis was implemented and a diversity index was estimated. Higher part of variation found (92.05%) was attributed to isolate. There was no difference in diversity for the levels we analyzed. Members of one VCG occurred in the three regions, whereas members of other groups occurred in one or two regions. At in vitro assays, the production of cercosporin was evaluated, and the concentration ranged from 1.71 to 35.327 μMol/isolate. The percentage of total variance among isolates was 1.9, 7.8, and 48.9% for region, plantings and isolates levels, respectively. No effect of crop system (P=0.88) was detected in the variability. Dissimilarity measures were estimated among isolates (Malahanobis index) and the Unweighted pair-group method with arithmetical averages (UPGMA) was performed to determine groups of similar cercosporin production (CPG). Isolates with an low and median levels of production of predominated in the population. Considering the markers used, there are evidences that the studied population has a high variability and the region, crop system and plantings have no effect on the variability.
publishDate 2007
dc.date.available.fl_str_mv 2007-12-13
2015-03-26T12:42:08Z
dc.date.issued.fl_str_mv 2007-05-04
dc.date.accessioned.fl_str_mv 2015-03-26T12:42:08Z
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dc.identifier.citation.fl_str_mv MARTINS, Ricardo Brainer. Variability of Cercospora coffeicola in Minas Gerais State, Brazil, characterized by vegetative compatibility and production of cercosporina. 2007. 99 f. Tese (Doutorado em Etiologia; Epidemiologia; Controle) - Universidade Federal de Viçosa, Viçosa, 2007.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/1078
identifier_str_mv MARTINS, Ricardo Brainer. Variability of Cercospora coffeicola in Minas Gerais State, Brazil, characterized by vegetative compatibility and production of cercosporina. 2007. 99 f. Tese (Doutorado em Etiologia; Epidemiologia; Controle) - Universidade Federal de Viçosa, Viçosa, 2007.
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