Expressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)

Detalhes bibliográficos
Ano de defesa: 2006
Autor(a) principal: Luz, Dirce Ferreira
Orientador(a): Fontes, Elizabeth Pacheco Batista lattes
Banca de defesa: Rezende, Sebastião Tavares de lattes, Martín, Francisco Javier Medrano lattes
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Viçosa
Programa de Pós-Graduação: Doutorado em Bioquímica Agrícola
Departamento: Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal
País: BR
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://locus.ufv.br/handle/123456789/333
Resumo: The sucrose binding protein (SBP) belongs to the cupin family of proteins and is structurally related to vicilin-like storage proteins. In this investigation, SBP was expressed in E. coli and large amounts of the protein accumulated in the insoluble fraction as aggregated, denatured protein. The refolding of the purified protein proceeded with a progressive removal of urea into the renaturation buffer, which contained an oxido shuffling system (2 mM reduced glutathione and 0.2 mM oxidized glutathione) and glycerol 5% (v/v) as a proteinstabilizing agent. The renaturation of the protein was assayed by using far-UV circular dichroism (CD), intrinsic fluorescence, and quenching by acrylamide, KCl and KI. The percentage of secondary structure of the renatured protein, which was calculated on the basis of the CD spectrum, was consistent with that obtained by theoretical modeling with a large predominance of beta-strand structure (42%) over the alfa-helix (9.9%). The fluorescence emission maximum of 303 nm for SBP indicated that the fluorescent tryptophan was completely buried within a highly hydrophobic environment. Nevertheless, tryptophan quenching by acrylamide, KI and CsCL and the respective Stem-Volmer (Ksv) constant of 23.5 +- 0.5 M-1, 16.1 +- 0.2 M-1 and 4.9 +- 0.1 M-1 indicate that the fluorescent tryptophan residues were quite accessible to the quenchers and hence exposed to the solvent. We also measured the equilibrium dissociation constant (Kd) of sucrose binding by fluorescence titration using the refolded protein. The low sucrose binding affinity (Kd = 2.79 +- 0.22 mM) of the renatured protein was similar to that of the native protein purified from soybean seeds. Collectively, our results indicate that the folded structure of the renatured protein is similar to the native SBP protein. As a member of the bicupin family of proteins which include highly stable seed storage proteins, it was of interest to determine the structural stability of SBP. The thermal and chemical denaturations of the protein were examined by monitoring changes in the CD spectra and in the intrinsic fluorescence of the renatured protein. Our results indicate that SBP remained folded to a similar extent in the presence or absence of 8 M urea or 6 M GdnHCl. Likewise, it was fairly stable to high temperatures. The high stability of the renatured protein may be a eminiscent property of SBP from its evolutionary relatedness to the seed storage proteins.
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spelling Luz, Dirce Ferreirahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4706238T7Pereira, Maria Cristina Baracathttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780021E6Oliveira, Marli Lourdes dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4776566H8Fontes, Elizabeth Pacheco Batistahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781848H2Rezende, Sebastião Tavares dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4787599A3Martín, Francisco Javier Medranohttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4777240H82015-03-26T12:15:23Z2006-11-072015-03-26T12:15:23Z2006-06-09LUZ, Dirce Ferreira. Heterologous expression and biochemical characterization of GmSBP2/S64 recombinant protein from soybean (Glycine max). 2006. 87 f. Tese (Doutorado em Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal) - Universidade Federal de Viçosa, Viçosa, 2006.http://locus.ufv.br/handle/123456789/333The sucrose binding protein (SBP) belongs to the cupin family of proteins and is structurally related to vicilin-like storage proteins. In this investigation, SBP was expressed in E. coli and large amounts of the protein accumulated in the insoluble fraction as aggregated, denatured protein. The refolding of the purified protein proceeded with a progressive removal of urea into the renaturation buffer, which contained an oxido shuffling system (2 mM reduced glutathione and 0.2 mM oxidized glutathione) and glycerol 5% (v/v) as a proteinstabilizing agent. The renaturation of the protein was assayed by using far-UV circular dichroism (CD), intrinsic fluorescence, and quenching by acrylamide, KCl and KI. The percentage of secondary structure of the renatured protein, which was calculated on the basis of the CD spectrum, was consistent with that obtained by theoretical modeling with a large predominance of beta-strand structure (42%) over the alfa-helix (9.9%). The fluorescence emission maximum of 303 nm for SBP indicated that the fluorescent tryptophan was completely buried within a highly hydrophobic environment. Nevertheless, tryptophan quenching by acrylamide, KI and CsCL and the respective Stem-Volmer (Ksv) constant of 23.5 +- 0.5 M-1, 16.1 +- 0.2 M-1 and 4.9 +- 0.1 M-1 indicate that the fluorescent tryptophan residues were quite accessible to the quenchers and hence exposed to the solvent. We also measured the equilibrium dissociation constant (Kd) of sucrose binding by fluorescence titration using the refolded protein. The low sucrose binding affinity (Kd = 2.79 +- 0.22 mM) of the renatured protein was similar to that of the native protein purified from soybean seeds. Collectively, our results indicate that the folded structure of the renatured protein is similar to the native SBP protein. As a member of the bicupin family of proteins which include highly stable seed storage proteins, it was of interest to determine the structural stability of SBP. The thermal and chemical denaturations of the protein were examined by monitoring changes in the CD spectra and in the intrinsic fluorescence of the renatured protein. Our results indicate that SBP remained folded to a similar extent in the presence or absence of 8 M urea or 6 M GdnHCl. Likewise, it was fairly stable to high temperatures. The high stability of the renatured protein may be a eminiscent property of SBP from its evolutionary relatedness to the seed storage proteins.A proteína de ligação à sacarose (SBP) pertence à família das proteínas cupim e é relacionada estruturalmente às proteínas de armazenamento do tipo vicilinas. Nesta investigação, a SBP foi expressa em E. coli e grandes quantidades da proteína foi acumulada na fração insolúvel como agregados, proteína desnaturada. A renaturação da proteína purificada se deu com a remoção progressiva da uréia no tampão de renaturação, que continha um sistema de retirada de óxido (2 mM de glutationa reduzida e 0,2 mM de glutationa oxidada) e glicerol 5% (v/v) como um agente estabilizador de proteína. A renaturação da proteína foi monitorada usando o dicroísmo circular na faixa do UV distante (CD), a fluorescência intrínseca, e o apagamento por acrilamida, KCl e KI. A porcentagem da estrutura secundária da proteína renaturada, que foi calculada com base no espectro de CD, foi consistente com aquela obtida pelo modelamento teórico com grande predominância da estrutura de beta barril (42%) sobre a alfa-hélice (9,9%). O máximo da emissão de fluorescência de 303 nm para a SBP indicou que o triptofano fluorescente foi completamente internalizado dentro de um ambiente altamente hidrofóbico. Não obstante, o apagamento do triptofano pela acrilamida, KI e CsCL e respectiva constante de Stern-Volmer (Ksv) de 23,5 +- 0,5 M-1, 16,1 +- 0,2 M-1 e 4,9 +- 0,1 M-1 indicam que os resíduos de triptofano fluorescentes foram bastante acessíveis aos apagadores e, conseqüentemente, expostos ao solvente. Foi medida também a constante de dissociação de equilíbrio (Kd) da ligação da sacarose por titulação da fluorescência usando a proteína renaturada. A baixa afinidade de ligação da sacarose (Kd = 2,79 +- 0,22 mM) à proteína renaturada foi similar àquela da proteína nativa purificada das sementes de soja. Coletivamente, os resultados apontam que a estrutura enovelada da proteína renaturada é similar à proteína SBP nativa. Como um membro da família das proteínas bicupim que incluem proteínas de armazenamento de semente altamente estáveis, foi de interesse determinar a estabilidade estrutural da SBP. As desnaturações térmicas e químicas da proteína foram examinadas por monitoramento das mudanças nos espectros de CD e na fluorescência intrínseca da proteína renaturada. Os resultados indicam que a SBP permaneceu enovelada em uma extensão similar na presença ou ausência de 8 M de uréia ou de 6 M de GdnHCl. Do mesmo modo, foi razoavelmente estável em altas temperaturas. A alta estabilidade da proteína renaturada pode ser uma propriedade remanescente da SBP de seu parentesco evolucionário com as proteínas de armazenamento de sementes.Conselho Nacional de Desenvolvimento Científico e Tecnológicoapplication/pdfporUniversidade Federal de ViçosaDoutorado em Bioquímica AgrícolaUFVBRBioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animalProteína recombinanteDicroísmo circularFluorescênciaRecombinant proteinCircular dichroismFluorescenceCNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULARExpressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)Heterologous expression and biochemical characterization of GmSBP2/S64 recombinant protein from soybean (Glycine max)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf1424036https://locus.ufv.br//bitstream/123456789/333/1/texto%20completo.pdf1fe1660dedfa2a4e918e59abf262265fMD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain157017https://locus.ufv.br//bitstream/123456789/333/2/texto%20completo.pdf.txt53d5796f8042f2bc2ab43a3b0f148c89MD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3609https://locus.ufv.br//bitstream/123456789/333/3/texto%20completo.pdf.jpg6fe43a6f946b4dd26f0516a0a7bbcd48MD53123456789/3332016-04-06 23:03:19.013oai:locus.ufv.br:123456789/333Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-07T02:03:19LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Expressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)
dc.title.alternative.eng.fl_str_mv Heterologous expression and biochemical characterization of GmSBP2/S64 recombinant protein from soybean (Glycine max)
title Expressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)
spellingShingle Expressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)
Luz, Dirce Ferreira
Proteína recombinante
Dicroísmo circular
Fluorescência
Recombinant protein
Circular dichroism
Fluorescence
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
title_short Expressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)
title_full Expressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)
title_fullStr Expressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)
title_full_unstemmed Expressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)
title_sort Expressão heteróloga e caracterização bioquímica da proteína recombinante GmSBP2/S64 da soja (Glycine max)
author Luz, Dirce Ferreira
author_facet Luz, Dirce Ferreira
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4706238T7
dc.contributor.author.fl_str_mv Luz, Dirce Ferreira
dc.contributor.advisor-co1.fl_str_mv Pereira, Maria Cristina Baracat
dc.contributor.advisor-co1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780021E6
dc.contributor.advisor-co2.fl_str_mv Oliveira, Marli Lourdes de
dc.contributor.advisor-co2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4776566H8
dc.contributor.advisor1.fl_str_mv Fontes, Elizabeth Pacheco Batista
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781848H2
dc.contributor.referee1.fl_str_mv Rezende, Sebastião Tavares de
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4787599A3
dc.contributor.referee2.fl_str_mv Martín, Francisco Javier Medrano
dc.contributor.referee2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4777240H8
contributor_str_mv Pereira, Maria Cristina Baracat
Oliveira, Marli Lourdes de
Fontes, Elizabeth Pacheco Batista
Rezende, Sebastião Tavares de
Martín, Francisco Javier Medrano
dc.subject.por.fl_str_mv Proteína recombinante
Dicroísmo circular
Fluorescência
topic Proteína recombinante
Dicroísmo circular
Fluorescência
Recombinant protein
Circular dichroism
Fluorescence
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
dc.subject.eng.fl_str_mv Recombinant protein
Circular dichroism
Fluorescence
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
description The sucrose binding protein (SBP) belongs to the cupin family of proteins and is structurally related to vicilin-like storage proteins. In this investigation, SBP was expressed in E. coli and large amounts of the protein accumulated in the insoluble fraction as aggregated, denatured protein. The refolding of the purified protein proceeded with a progressive removal of urea into the renaturation buffer, which contained an oxido shuffling system (2 mM reduced glutathione and 0.2 mM oxidized glutathione) and glycerol 5% (v/v) as a proteinstabilizing agent. The renaturation of the protein was assayed by using far-UV circular dichroism (CD), intrinsic fluorescence, and quenching by acrylamide, KCl and KI. The percentage of secondary structure of the renatured protein, which was calculated on the basis of the CD spectrum, was consistent with that obtained by theoretical modeling with a large predominance of beta-strand structure (42%) over the alfa-helix (9.9%). The fluorescence emission maximum of 303 nm for SBP indicated that the fluorescent tryptophan was completely buried within a highly hydrophobic environment. Nevertheless, tryptophan quenching by acrylamide, KI and CsCL and the respective Stem-Volmer (Ksv) constant of 23.5 +- 0.5 M-1, 16.1 +- 0.2 M-1 and 4.9 +- 0.1 M-1 indicate that the fluorescent tryptophan residues were quite accessible to the quenchers and hence exposed to the solvent. We also measured the equilibrium dissociation constant (Kd) of sucrose binding by fluorescence titration using the refolded protein. The low sucrose binding affinity (Kd = 2.79 +- 0.22 mM) of the renatured protein was similar to that of the native protein purified from soybean seeds. Collectively, our results indicate that the folded structure of the renatured protein is similar to the native SBP protein. As a member of the bicupin family of proteins which include highly stable seed storage proteins, it was of interest to determine the structural stability of SBP. The thermal and chemical denaturations of the protein were examined by monitoring changes in the CD spectra and in the intrinsic fluorescence of the renatured protein. Our results indicate that SBP remained folded to a similar extent in the presence or absence of 8 M urea or 6 M GdnHCl. Likewise, it was fairly stable to high temperatures. The high stability of the renatured protein may be a eminiscent property of SBP from its evolutionary relatedness to the seed storage proteins.
publishDate 2006
dc.date.available.fl_str_mv 2006-11-07
2015-03-26T12:15:23Z
dc.date.issued.fl_str_mv 2006-06-09
dc.date.accessioned.fl_str_mv 2015-03-26T12:15:23Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
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dc.identifier.citation.fl_str_mv LUZ, Dirce Ferreira. Heterologous expression and biochemical characterization of GmSBP2/S64 recombinant protein from soybean (Glycine max). 2006. 87 f. Tese (Doutorado em Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal) - Universidade Federal de Viçosa, Viçosa, 2006.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/333
identifier_str_mv LUZ, Dirce Ferreira. Heterologous expression and biochemical characterization of GmSBP2/S64 recombinant protein from soybean (Glycine max). 2006. 87 f. Tese (Doutorado em Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal) - Universidade Federal de Viçosa, Viçosa, 2006.
url http://locus.ufv.br/handle/123456789/333
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