Expressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidii

Detalhes bibliográficos
Ano de defesa: 2013
Autor(a) principal: Rosado, Carla Cristina Gonçalves
Orientador(a): Alfenas, Acelino Couto lattes
Banca de defesa: Cruz, Cosme Damião lattes, Zerbini, Poliane Alfenas lattes, Alves, Alexandre Alonso lattes
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Viçosa
Programa de Pós-Graduação: Doutorado em Genética e Melhoramento
Departamento: Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me
País: BR
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://locus.ufv.br/handle/123456789/1384
Resumo: In recent years, there has been great expansion in eucalyptus plantations to meet the growing world demand for raw material for forest-based industries. Concurrently, the expansion of planted areas has concomitantly increased the incidence and severity of diseases in plantations. Among these, eucalyptus rust, caused by Puccinia psidii, is one of the most frequent and has the greatest potential losses. The best option for disease control is planting of resistant genotypes, but little is known about the genetic basis of resistance. This work aimed to obtain information about the genetic architecture of the defense response of eucalyptus plants to eucalyptus rust in order to obtain resistant genotypes and minimize the risk of loss to disease. Utilized were rooted cuttings of two clones, G21 and G33, one resistant and the other susceptible to eucalyptus rust, respectively. The identity of the cuttings of each clone was confirmed by microsatellite markers. The experiment was in completely randomized design (CRD) in the Split-Plots layout, containing inoculated and not inoculated cuttings of both clones. The single pustule isolate UFV-2 (race 1) of P.psidii was used. Three apical branches (~6) were collected at 0 h, 6 h, 12 h, 18 h, 24 h, and 48 h after inoculations. For each of the six times eight plants from each genotype were inoculated. Six microarray slides were produced for a total of 48 chambers. In each chamber 46.274 genes were represented. The cRNA was marked with the fluorochromes Cy3 and Cy5. The RNA extracted and the incorporation of the fluorochromes showed themselves to be of good quality. Forty three genes differentially expressed with the ratio G21/G33 of foldchange greater than 1.5 and corrected probability greater than 0.01 were found. Of these, 22 were up-regulated and 21 were down-regulated. Both clones possessed genes directly related to biotic and abiotic stress response, whereas G21 possesses genes called LRR, protein MLO, sulfotransferase 2A, U3 ubiquitin able to intermediate the recognition of the P. psidii infection and efficiently activate the mechanisms that restrict the colonization of the pathogen in the plant material. The results obtained serve to direct future investigations about the pathosystem Eucalyptus-Puccina and aid in the identification of targets for the control of the disease in the field.
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spelling Rosado, Carla Cristina Gonçalveshttp://lattes.cnpq.br/3862197321344265Guimarães, Lúcio Mauro da Silvahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4766939H1Kirst, Matiashttp://lattes.cnpq.br/4629129505794706Alfenas, Acelino Coutohttp://lattes.cnpq.br/2514320654462590Cruz, Cosme Damiãohttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4788274A6Zerbini, Poliane Alfenashttp://lattes.cnpq.br/8632328159533071Alves, Alexandre Alonsohttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4778972H72015-03-26T12:45:40Z2013-12-022015-03-26T12:45:40Z2013-04-12ROSADO, Carla Cristina Gonçalves. Gene expression of defense response of Eucalyptus grandis to infection by Puccinia psidii. 2013. 48 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2013.http://locus.ufv.br/handle/123456789/1384In recent years, there has been great expansion in eucalyptus plantations to meet the growing world demand for raw material for forest-based industries. Concurrently, the expansion of planted areas has concomitantly increased the incidence and severity of diseases in plantations. Among these, eucalyptus rust, caused by Puccinia psidii, is one of the most frequent and has the greatest potential losses. The best option for disease control is planting of resistant genotypes, but little is known about the genetic basis of resistance. This work aimed to obtain information about the genetic architecture of the defense response of eucalyptus plants to eucalyptus rust in order to obtain resistant genotypes and minimize the risk of loss to disease. Utilized were rooted cuttings of two clones, G21 and G33, one resistant and the other susceptible to eucalyptus rust, respectively. The identity of the cuttings of each clone was confirmed by microsatellite markers. The experiment was in completely randomized design (CRD) in the Split-Plots layout, containing inoculated and not inoculated cuttings of both clones. The single pustule isolate UFV-2 (race 1) of P.psidii was used. Three apical branches (~6) were collected at 0 h, 6 h, 12 h, 18 h, 24 h, and 48 h after inoculations. For each of the six times eight plants from each genotype were inoculated. Six microarray slides were produced for a total of 48 chambers. In each chamber 46.274 genes were represented. The cRNA was marked with the fluorochromes Cy3 and Cy5. The RNA extracted and the incorporation of the fluorochromes showed themselves to be of good quality. Forty three genes differentially expressed with the ratio G21/G33 of foldchange greater than 1.5 and corrected probability greater than 0.01 were found. Of these, 22 were up-regulated and 21 were down-regulated. Both clones possessed genes directly related to biotic and abiotic stress response, whereas G21 possesses genes called LRR, protein MLO, sulfotransferase 2A, U3 ubiquitin able to intermediate the recognition of the P. psidii infection and efficiently activate the mechanisms that restrict the colonization of the pathogen in the plant material. The results obtained serve to direct future investigations about the pathosystem Eucalyptus-Puccina and aid in the identification of targets for the control of the disease in the field.Nos últimos anos, tem havido grande expansão das plantações de eucalipto para suprir a crescente demanda mundial de matéria-prima para as indústrias de base florestal. Paralelamente à expansão das áreas plantadas, tem aumentado concomitantemente a incidência e severidade de doenças na cultura. Dentre essas a ferrugem, causada por Puccinia psidii, destaca-se como uma das mais frequentes e com maior potencial de perdas. A melhor alternativa de controle da doença é o plantio de genótipos resistentes, mas pouco se sabe sobre a base genética da resistência. Este trabalho objetivou obter informações a cerca da arquitetura genética da resposta de defesa de plantas de eucalipto à ferrugem a fim de embasar a obtenção de genótipos resistentes e minimizar riscos de perdas pela doença. Foram utilizadas mudas de dois clones, G21 e G33, resistente e suscetível à ferrugem, respectivamente. A identidade das mudas de cada clone foi confirmada por meio de marcadores microssatélites. O experimento foi em delineamento Inteiramente Casualizado (DIC) no esquema de Parcelas Sub-divididas, contendo os clones R e S inoculados e não inoculados. Utilizou-se o isolado monopustular UFV-2 de P. psidii, pertencente à raça 1. Foram coletados três ramos apicais (~6 folhas) nos tempos 0 h, 6 h, 12 h, 18 h, 24 h e 48 h após inoculação. Para cada um dos seis tempos foram inoculadas oito plantas de cada genótipo. Seis lâminas de microarranjo foram produzidas somando um total de 48 câmaras. Em cada câmara foram representados 46.274 genes. Os cRNA foram marcados com os fluorócromos Cy3 e Cy5. O RNA extraído e a incorporação dos fluorócromos apresentaram-se de boa qualidade. Foram encontrados 43 genes diferencialmente expressos com razão G21/G33 de foldchange maiores que 1,5 e probabilidade corrigida maior que 0,01. Dentre esses, 22 foram induzidos e 21 foram reprimidos. Ambos os clones possuem genes relacionados diretamente com resposta a estresses bióticos e abióticos, sendo que o clone G21 possui genes com domínio LRR, proteína MLO, sulfotransferase 2A, U3 ubiquitina capazes de intermediar o reconhecimento da infecção de P. psidii e ativar eficientemente os mecanismos que restringem a colonização do patógeno nos tecidos da planta. Os resultados obtidos servem para direcionar futuras investigações sobre o patossistema Eucalyptus-Puccinia e auxiliar na identificação de alvos para o controle da doença em nível de campo.Conselho Nacional de Desenvolvimento Científico e Tecnológicoapplication/pdfporUniversidade Federal de ViçosaDoutorado em Genética e MelhoramentoUFVBRGenética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; MeFerrugem do eucaliptoMicroarranjoGenes de resistênciaPatologia florestalEucalyptus rustMicroarrayResistance genesForest PathologyCNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA VEGETALExpressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidiiGene expression of defense response of Eucalyptus grandis to infection by Puccinia psidiiinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf1247382https://locus.ufv.br//bitstream/123456789/1384/1/texto%20completo.pdfcdb439b17c394cccfe291fd782cc71a5MD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain101787https://locus.ufv.br//bitstream/123456789/1384/2/texto%20completo.pdf.txt64591d7c801fa249f948975dbba0875eMD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3459https://locus.ufv.br//bitstream/123456789/1384/3/texto%20completo.pdf.jpg052a10bf206f36b12158182ba172fbefMD53123456789/13842016-04-07 23:06:26.354oai:locus.ufv.br:123456789/1384Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-08T02:06:26LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Expressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidii
dc.title.alternative.eng.fl_str_mv Gene expression of defense response of Eucalyptus grandis to infection by Puccinia psidii
title Expressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidii
spellingShingle Expressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidii
Rosado, Carla Cristina Gonçalves
Ferrugem do eucalipto
Microarranjo
Genes de resistência
Patologia florestal
Eucalyptus rust
Microarray
Resistance genes
Forest Pathology
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA VEGETAL
title_short Expressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidii
title_full Expressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidii
title_fullStr Expressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidii
title_full_unstemmed Expressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidii
title_sort Expressão gênica da resposta de defesa de plantas de Eucalyptus grandis à infecção por Puccinia psidii
author Rosado, Carla Cristina Gonçalves
author_facet Rosado, Carla Cristina Gonçalves
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://lattes.cnpq.br/3862197321344265
dc.contributor.author.fl_str_mv Rosado, Carla Cristina Gonçalves
dc.contributor.advisor-co1.fl_str_mv Guimarães, Lúcio Mauro da Silva
dc.contributor.advisor-co1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4766939H1
dc.contributor.advisor-co2.fl_str_mv Kirst, Matias
dc.contributor.advisor-co2Lattes.fl_str_mv http://lattes.cnpq.br/4629129505794706
dc.contributor.advisor1.fl_str_mv Alfenas, Acelino Couto
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/2514320654462590
dc.contributor.referee1.fl_str_mv Cruz, Cosme Damião
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4788274A6
dc.contributor.referee2.fl_str_mv Zerbini, Poliane Alfenas
dc.contributor.referee2Lattes.fl_str_mv http://lattes.cnpq.br/8632328159533071
dc.contributor.referee3.fl_str_mv Alves, Alexandre Alonso
dc.contributor.referee3Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4778972H7
contributor_str_mv Guimarães, Lúcio Mauro da Silva
Kirst, Matias
Alfenas, Acelino Couto
Cruz, Cosme Damião
Zerbini, Poliane Alfenas
Alves, Alexandre Alonso
dc.subject.por.fl_str_mv Ferrugem do eucalipto
Microarranjo
Genes de resistência
Patologia florestal
topic Ferrugem do eucalipto
Microarranjo
Genes de resistência
Patologia florestal
Eucalyptus rust
Microarray
Resistance genes
Forest Pathology
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA VEGETAL
dc.subject.eng.fl_str_mv Eucalyptus rust
Microarray
Resistance genes
Forest Pathology
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA VEGETAL
description In recent years, there has been great expansion in eucalyptus plantations to meet the growing world demand for raw material for forest-based industries. Concurrently, the expansion of planted areas has concomitantly increased the incidence and severity of diseases in plantations. Among these, eucalyptus rust, caused by Puccinia psidii, is one of the most frequent and has the greatest potential losses. The best option for disease control is planting of resistant genotypes, but little is known about the genetic basis of resistance. This work aimed to obtain information about the genetic architecture of the defense response of eucalyptus plants to eucalyptus rust in order to obtain resistant genotypes and minimize the risk of loss to disease. Utilized were rooted cuttings of two clones, G21 and G33, one resistant and the other susceptible to eucalyptus rust, respectively. The identity of the cuttings of each clone was confirmed by microsatellite markers. The experiment was in completely randomized design (CRD) in the Split-Plots layout, containing inoculated and not inoculated cuttings of both clones. The single pustule isolate UFV-2 (race 1) of P.psidii was used. Three apical branches (~6) were collected at 0 h, 6 h, 12 h, 18 h, 24 h, and 48 h after inoculations. For each of the six times eight plants from each genotype were inoculated. Six microarray slides were produced for a total of 48 chambers. In each chamber 46.274 genes were represented. The cRNA was marked with the fluorochromes Cy3 and Cy5. The RNA extracted and the incorporation of the fluorochromes showed themselves to be of good quality. Forty three genes differentially expressed with the ratio G21/G33 of foldchange greater than 1.5 and corrected probability greater than 0.01 were found. Of these, 22 were up-regulated and 21 were down-regulated. Both clones possessed genes directly related to biotic and abiotic stress response, whereas G21 possesses genes called LRR, protein MLO, sulfotransferase 2A, U3 ubiquitin able to intermediate the recognition of the P. psidii infection and efficiently activate the mechanisms that restrict the colonization of the pathogen in the plant material. The results obtained serve to direct future investigations about the pathosystem Eucalyptus-Puccina and aid in the identification of targets for the control of the disease in the field.
publishDate 2013
dc.date.available.fl_str_mv 2013-12-02
2015-03-26T12:45:40Z
dc.date.issued.fl_str_mv 2013-04-12
dc.date.accessioned.fl_str_mv 2015-03-26T12:45:40Z
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dc.identifier.citation.fl_str_mv ROSADO, Carla Cristina Gonçalves. Gene expression of defense response of Eucalyptus grandis to infection by Puccinia psidii. 2013. 48 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2013.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/1384
identifier_str_mv ROSADO, Carla Cristina Gonçalves. Gene expression of defense response of Eucalyptus grandis to infection by Puccinia psidii. 2013. 48 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2013.
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