Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia

Detalhes bibliográficos
Ano de defesa: 2019
Autor(a) principal: Gonçalves, Tiago Maretti
Orientador(a): Fávero, Alessandra Pereira lattes
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de São Carlos
Câmpus São Carlos
Programa de Pós-Graduação: Programa de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEv
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: https://repositorio.ufscar.br/handle/ufscar/11882
Resumo: Belonging to the grass family, the genus Paspalum has more than 350 species, many of them with great forage potential or for use as vegetation. The Paspalum Germplasm Bank (GB) of Embrapa Pecuária Sudeste enables research with the genus and currently has about 450 accessions of 50 species, most of them belonging to the Plicatula group. Many of the Paspalum accessions of this group are tetraploid (2n = 4x = 40) and of apomitic behavior, and sexual genotypes are rare. Identifying only accessions with apomitic reproduction mode in a collection limits the breeding program because there is no possibility of hybridization. To circumvent this situation, diploid and sexual genotypes must be polyploidized for use in intra and interspecific crosses. Thus, reproductive characterization in Paspalum is of great importance, since it enables the identification of sexual genotypes and facilitates the choice of potential parents for genetic improvement. In this context, the objective of the present work was to reproductively characterize 137 Paspalum accessions belonging to the informal Plicatula group conserved in the Paspalum GB of Embrapa Pecuária Sudeste by the use of flow cytometry and cytoembriological analysis and search for molecular markers associated to apomixis. After analysis of the data obtained by flow cytometry, 49 accessions were considered highly apomictic, 85 were facultative apomictics and one accession (BGP 272 - P. rojasii) showed behavior compatible with the sexual reproductive mode. In addition to these results, the flow cytometry technique made it possible for the first time to characterize the reproductive mode of 12 accessions belonging to P. rhodopedum species. By cytoembriological analysis, five accessions were characterized, three sexual accessions (BGP 281 - P. lenticulare; BGP 272 - P. rojasii and BGP 380 - P. compressifolium) and two accessions (BGP 232 - P. plicatulum; BGP 178 - P. compressifolium) characterized as highly apomictic and facultative apomictic, respectively. In the molecular part, an association for apomixis was sought with the use of 1 marker p779/780, described as completely linked to apporia in B. decumbens, two RAPD (Random Amplified Polymorphic DNA) and 19 SCAR (Sequence Characterized Amplified Region) previously associated with apomixis in the genus Paspalum and, based on the Bulk Segregant Analysis methodology, 51 nuclear microsatellite markers were genotyped, totaling 73 molecular markers evaluated in P. compressifolium and P. lenticulare sexual and apomitic accessions. For SCAR markers, accessions belonging to P. rojasii were also included. A large polymorphism occurred between the samples, but no link was observed between the apomixis characteristic and the molecular markers evaluated. The present study shows a greater reproductive genetic variation among the characterized accessions, there was a correspondence between the ploidy level and the reproduction mode, as expected, and none of the genotyped molecular markers were linked to apospory in the evaluated germplasm. Thus, this study presented important results that could be applied to the selection of parents in Paspalum breeding programs.
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spelling Gonçalves, Tiago MarettiFávero, Alessandra Pereirahttp://lattes.cnpq.br/4329892306148506Vigna, Bianca Baccili Zanottohttp://lattes.cnpq.br/1663784979286725http://lattes.cnpq.br/76223753817745182019-09-24T13:33:20Z2019-09-24T13:33:20Z2019-07-26GONÇALVES, Tiago Maretti. Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia. 2019. Tese (Doutorado em Genética Evolutiva e Biologia Molecular) – Universidade Federal de São Carlos, São Carlos, 2019. Disponível em: https://repositorio.ufscar.br/handle/ufscar/11882.https://repositorio.ufscar.br/handle/ufscar/11882Belonging to the grass family, the genus Paspalum has more than 350 species, many of them with great forage potential or for use as vegetation. The Paspalum Germplasm Bank (GB) of Embrapa Pecuária Sudeste enables research with the genus and currently has about 450 accessions of 50 species, most of them belonging to the Plicatula group. Many of the Paspalum accessions of this group are tetraploid (2n = 4x = 40) and of apomitic behavior, and sexual genotypes are rare. Identifying only accessions with apomitic reproduction mode in a collection limits the breeding program because there is no possibility of hybridization. To circumvent this situation, diploid and sexual genotypes must be polyploidized for use in intra and interspecific crosses. Thus, reproductive characterization in Paspalum is of great importance, since it enables the identification of sexual genotypes and facilitates the choice of potential parents for genetic improvement. In this context, the objective of the present work was to reproductively characterize 137 Paspalum accessions belonging to the informal Plicatula group conserved in the Paspalum GB of Embrapa Pecuária Sudeste by the use of flow cytometry and cytoembriological analysis and search for molecular markers associated to apomixis. After analysis of the data obtained by flow cytometry, 49 accessions were considered highly apomictic, 85 were facultative apomictics and one accession (BGP 272 - P. rojasii) showed behavior compatible with the sexual reproductive mode. In addition to these results, the flow cytometry technique made it possible for the first time to characterize the reproductive mode of 12 accessions belonging to P. rhodopedum species. By cytoembriological analysis, five accessions were characterized, three sexual accessions (BGP 281 - P. lenticulare; BGP 272 - P. rojasii and BGP 380 - P. compressifolium) and two accessions (BGP 232 - P. plicatulum; BGP 178 - P. compressifolium) characterized as highly apomictic and facultative apomictic, respectively. In the molecular part, an association for apomixis was sought with the use of 1 marker p779/780, described as completely linked to apporia in B. decumbens, two RAPD (Random Amplified Polymorphic DNA) and 19 SCAR (Sequence Characterized Amplified Region) previously associated with apomixis in the genus Paspalum and, based on the Bulk Segregant Analysis methodology, 51 nuclear microsatellite markers were genotyped, totaling 73 molecular markers evaluated in P. compressifolium and P. lenticulare sexual and apomitic accessions. For SCAR markers, accessions belonging to P. rojasii were also included. A large polymorphism occurred between the samples, but no link was observed between the apomixis characteristic and the molecular markers evaluated. The present study shows a greater reproductive genetic variation among the characterized accessions, there was a correspondence between the ploidy level and the reproduction mode, as expected, and none of the genotyped molecular markers were linked to apospory in the evaluated germplasm. Thus, this study presented important results that could be applied to the selection of parents in Paspalum breeding programs.Pertencente à família das Gramíneas, o gênero Paspalum detém mais de 350 espécies, muitas delas com grande potencial forrageiro ou de uso como cobertura vegetal. O Banco Ativo de Germoplasma (BAG) de Paspalum da Embrapa Pecuária Sudeste possibilita pesquisas com o gênero possuindo atualmente cerca de 450 acessos de 50 espécies, a maioria pertencente ao grupo Plicatula. Muitos dos acessos de Paspalum deste grupo são tetraplóides (2n=4x=40) e de comportamento apomítico, sendo raros os genótipos sexuais. A identificação apenas de acessos com modo de reprodução apomítica em uma coleção limita o programa de melhoramento genético, pois inviabiliza as hibridações em grande número. Para contornar essa situação, genótipos diplóides e sexuais devem ser poliploidizados para serem utilizados em cruzamentos intra e interespecíficos. Desta maneira, a caracterização reprodutiva em Paspalum é de grande importância, uma vez que viabiliza a identificação de genótipos sexuais e facilita a escolha de genitores potenciais para o melhoramento genético. Neste contexto, o objetivo do presente trabalho foi caracterizar reprodutivamente 137 acessos de Paspalum pertencentes ao grupo informal Plicatula conservados no BAG de Paspalum da Embrapa Pecuária Sudeste pelo uso de citometria de fluxo e análise citoembriológica e buscar marcadores moleculares associados a apomixia neste grupo. Após a análise dos dados obtidos pela citometria de fluxo, 49 acessos foram considerados altamente apomíticos, 85 foram apomíticos facultativos e um acesso (BGP 272 – P. rojasii) apresentou comportamento compatível com o modo reprodutivo sexual. Além destes resultados, a técnica de citometria de fluxo possibilitou pela primeira vez, a caracterização do modo reprodutivo de 12 acessos pertencentes a espécie P. rhodopedum. Pela análise citoembriológica, foram caracterizados cinco acessos, sendo três sexuais (BGP 281 – P. lenticulare; BGP 272 – P. rojasii e BGP 380 – P. compressifolium) e dois acessos (BGP 232 – P. plicatulum; BGP 178 – P. compressifolium) caracterizados como altamente apomítico e apomítico facultativo, respectivamente. Na parte molecular, houve a busca de associação para a apomixia com o uso de 1 marcador p779/780, descrito como completamente ligado a aposporia em B. decumbens, dois marcadores RAPD (Random Amplified Polymorphic DNA) e 19 SCAR (Sequence Characterized Amplified Region) previamente associados a apomixia no gênero Paspalum e, com base na metodologia de Análise de Bulk Segregante, foram genotipados 51 marcadores microssatélites nucleares, totalizando 73 marcadores moleculares avaliados em acessos sexuais e apomíticos de P. compressifolium e P. lenticulare. Para os marcadores SCAR também foram incluídos acessos pertencentes a P. rojasii. Ocorreu grande polimorfismo entre as amostras, porém não foi observada ligação entre a característica de apomixia e os marcadores moleculares avaliados. O presente estudo evidenciou uma significativa variação genético reprodutiva entre os acessos caracterizados, houve correspondência entre o nível de ploidia e o modo de reprodução como esperado e nenhum dos marcadores moleculares avaliados apresentaram ligação com a aposporia no germoplasma avaliado. Assim, este estudo apresentou resultados importantes que poderão ser aplicados na seleção de genitores em programas de melhoramento genético de Paspalum.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)CNPq: 141209/2017-8porUniversidade Federal de São CarlosCâmpus São CarlosPrograma de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEvUFSCarAttribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessCitometria de fluxoAnálise citoembriológicaGramíneasGermoplasmaPré-melhoramentoFlow cytometryCytoembriological analysisGrassesGermoplasmPre-breedingCIENCIAS BIOLOGICAS::GENETICA::GENETICA VEGETALModo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixiaReproductive mode of Paspalum spp. access (Plicatula informal group) and search for molecular markers associated with apomixisinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisreponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARORIGINALTESE DEFENDIDA 22 DE SETEMBRO DE 2019 VERSÃO FINAL.pdfTESE DEFENDIDA 22 DE SETEMBRO DE 2019 VERSÃO FINAL.pdfTese Final corrigidaapplication/pdf3532690https://{{ getenv "DSPACE_HOST" "repositorio.ufscar.br" }}/bitstream/ufscar/11882/3/TESE%20DEFENDIDA%2022%20DE%20SETEMBRO%20DE%202019%20VERS%c3%83O%20FINAL.pdf4b79c34b7a424f62c2c3b5dfaeede94dMD53Carta comprovante de versão final da Tese TIAGO MARETTI GONÇALVES 2019-09-23 10.19.17.pdfCarta comprovante de versão final da Tese TIAGO MARETTI GONÇALVES 2019-09-23 10.19.17.pdfapplication/pdf210325https://{{ getenv "DSPACE_HOST" "repositorio.ufscar.br" }}/bitstream/ufscar/11882/5/Carta%20comprovante%20de%20vers%c3%a3o%20final%20da%20Tese%20TIAGO%20MARETTI%20GON%c3%87ALVES%202019-09-23%2010.19.17.pdf76f1af8b64a5f05a20949bc75707d8e7MD55CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8811https://{{ getenv "DSPACE_HOST" "repositorio.ufscar.br" }}/bitstream/ufscar/11882/6/license_rdfe39d27027a6cc9cb039ad269a5db8e34MD56TEXTTESE DEFENDIDA 22 DE SETEMBRO DE 2019 VERSÃO FINAL.pdf.txtTESE DEFENDIDA 22 DE SETEMBRO DE 2019 VERSÃO FINAL.pdf.txtExtracted texttext/plain236839https://{{ getenv "DSPACE_HOST" "repositorio.ufscar.br" }}/bitstream/ufscar/11882/7/TESE%20DEFENDIDA%2022%20DE%20SETEMBRO%20DE%202019%20VERS%c3%83O%20FINAL.pdf.txtadde2e5c4de04e120338ede8975094baMD57Carta comprovante de versão final da Tese TIAGO MARETTI GONÇALVES 2019-09-23 10.19.17.pdf.txtCarta comprovante de versão final da Tese TIAGO MARETTI GONÇALVES 2019-09-23 10.19.17.pdf.txtExtracted texttext/plain22https://{{ getenv "DSPACE_HOST" "repositorio.ufscar.br" }}/bitstream/ufscar/11882/9/Carta%20comprovante%20de%20vers%c3%a3o%20final%20da%20Tese%20TIAGO%20MARETTI%20GON%c3%87ALVES%202019-09-23%2010.19.17.pdf.txtcc4a1be4ad7e47ba4fe5327259a9f389MD59THUMBNAILTESE DEFENDIDA 22 DE SETEMBRO DE 2019 VERSÃO FINAL.pdf.jpgTESE DEFENDIDA 22 DE SETEMBRO DE 2019 VERSÃO FINAL.pdf.jpgIM Thumbnailimage/jpeg6856https://{{ getenv "DSPACE_HOST" "repositorio.ufscar.br" }}/bitstream/ufscar/11882/8/TESE%20DEFENDIDA%2022%20DE%20SETEMBRO%20DE%202019%20VERS%c3%83O%20FINAL.pdf.jpg0d7f121402a72922a67b7b73982cb23cMD58Carta comprovante de versão final da Tese TIAGO MARETTI GONÇALVES 2019-09-23 10.19.17.pdf.jpgCarta comprovante de versão final da Tese TIAGO MARETTI GONÇALVES 2019-09-23 10.19.17.pdf.jpgIM Thumbnailimage/jpeg11713https://{{ getenv "DSPACE_HOST" "repositorio.ufscar.br" }}/bitstream/ufscar/11882/10/Carta%20comprovante%20de%20vers%c3%a3o%20final%20da%20Tese%20TIAGO%20MARETTI%20GON%c3%87ALVES%202019-09-23%2010.19.17.pdf.jpg3a48cf990f2b5ac367f85634c0b178d9MD510ufscar/118822019-09-25 06:15:20.53oai:repositorio.ufscar.br:ufscar/11882Repositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestopendoar:43222023-05-25T12:58:16.437359Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false
dc.title.por.fl_str_mv Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia
dc.title.alternative.eng.fl_str_mv Reproductive mode of Paspalum spp. access (Plicatula informal group) and search for molecular markers associated with apomixis
title Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia
spellingShingle Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia
Gonçalves, Tiago Maretti
Citometria de fluxo
Análise citoembriológica
Gramíneas
Germoplasma
Pré-melhoramento
Flow cytometry
Cytoembriological analysis
Grasses
Germoplasm
Pre-breeding
CIENCIAS BIOLOGICAS::GENETICA::GENETICA VEGETAL
title_short Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia
title_full Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia
title_fullStr Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia
title_full_unstemmed Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia
title_sort Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia
author Gonçalves, Tiago Maretti
author_facet Gonçalves, Tiago Maretti
author_role author
dc.contributor.authorlattes.por.fl_str_mv http://lattes.cnpq.br/7622375381774518
dc.contributor.author.fl_str_mv Gonçalves, Tiago Maretti
dc.contributor.advisor1.fl_str_mv Fávero, Alessandra Pereira
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/4329892306148506
dc.contributor.advisor-co1.fl_str_mv Vigna, Bianca Baccili Zanotto
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/1663784979286725
contributor_str_mv Fávero, Alessandra Pereira
Vigna, Bianca Baccili Zanotto
dc.subject.por.fl_str_mv Citometria de fluxo
Análise citoembriológica
Gramíneas
Germoplasma
Pré-melhoramento
topic Citometria de fluxo
Análise citoembriológica
Gramíneas
Germoplasma
Pré-melhoramento
Flow cytometry
Cytoembriological analysis
Grasses
Germoplasm
Pre-breeding
CIENCIAS BIOLOGICAS::GENETICA::GENETICA VEGETAL
dc.subject.eng.fl_str_mv Flow cytometry
Cytoembriological analysis
Grasses
Germoplasm
Pre-breeding
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::GENETICA::GENETICA VEGETAL
description Belonging to the grass family, the genus Paspalum has more than 350 species, many of them with great forage potential or for use as vegetation. The Paspalum Germplasm Bank (GB) of Embrapa Pecuária Sudeste enables research with the genus and currently has about 450 accessions of 50 species, most of them belonging to the Plicatula group. Many of the Paspalum accessions of this group are tetraploid (2n = 4x = 40) and of apomitic behavior, and sexual genotypes are rare. Identifying only accessions with apomitic reproduction mode in a collection limits the breeding program because there is no possibility of hybridization. To circumvent this situation, diploid and sexual genotypes must be polyploidized for use in intra and interspecific crosses. Thus, reproductive characterization in Paspalum is of great importance, since it enables the identification of sexual genotypes and facilitates the choice of potential parents for genetic improvement. In this context, the objective of the present work was to reproductively characterize 137 Paspalum accessions belonging to the informal Plicatula group conserved in the Paspalum GB of Embrapa Pecuária Sudeste by the use of flow cytometry and cytoembriological analysis and search for molecular markers associated to apomixis. After analysis of the data obtained by flow cytometry, 49 accessions were considered highly apomictic, 85 were facultative apomictics and one accession (BGP 272 - P. rojasii) showed behavior compatible with the sexual reproductive mode. In addition to these results, the flow cytometry technique made it possible for the first time to characterize the reproductive mode of 12 accessions belonging to P. rhodopedum species. By cytoembriological analysis, five accessions were characterized, three sexual accessions (BGP 281 - P. lenticulare; BGP 272 - P. rojasii and BGP 380 - P. compressifolium) and two accessions (BGP 232 - P. plicatulum; BGP 178 - P. compressifolium) characterized as highly apomictic and facultative apomictic, respectively. In the molecular part, an association for apomixis was sought with the use of 1 marker p779/780, described as completely linked to apporia in B. decumbens, two RAPD (Random Amplified Polymorphic DNA) and 19 SCAR (Sequence Characterized Amplified Region) previously associated with apomixis in the genus Paspalum and, based on the Bulk Segregant Analysis methodology, 51 nuclear microsatellite markers were genotyped, totaling 73 molecular markers evaluated in P. compressifolium and P. lenticulare sexual and apomitic accessions. For SCAR markers, accessions belonging to P. rojasii were also included. A large polymorphism occurred between the samples, but no link was observed between the apomixis characteristic and the molecular markers evaluated. The present study shows a greater reproductive genetic variation among the characterized accessions, there was a correspondence between the ploidy level and the reproduction mode, as expected, and none of the genotyped molecular markers were linked to apospory in the evaluated germplasm. Thus, this study presented important results that could be applied to the selection of parents in Paspalum breeding programs.
publishDate 2019
dc.date.accessioned.fl_str_mv 2019-09-24T13:33:20Z
dc.date.available.fl_str_mv 2019-09-24T13:33:20Z
dc.date.issued.fl_str_mv 2019-07-26
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dc.identifier.citation.fl_str_mv GONÇALVES, Tiago Maretti. Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia. 2019. Tese (Doutorado em Genética Evolutiva e Biologia Molecular) – Universidade Federal de São Carlos, São Carlos, 2019. Disponível em: https://repositorio.ufscar.br/handle/ufscar/11882.
dc.identifier.uri.fl_str_mv https://repositorio.ufscar.br/handle/ufscar/11882
identifier_str_mv GONÇALVES, Tiago Maretti. Modo reprodutivo de acessos de Paspalum spp. (grupo informal Plicatula) e busca de marcadores moleculares associados a apomixia. 2019. Tese (Doutorado em Genética Evolutiva e Biologia Molecular) – Universidade Federal de São Carlos, São Carlos, 2019. Disponível em: https://repositorio.ufscar.br/handle/ufscar/11882.
url https://repositorio.ufscar.br/handle/ufscar/11882
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Câmpus São Carlos
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEv
dc.publisher.initials.fl_str_mv UFSCar
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repository.name.fl_str_mv Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)
repository.mail.fl_str_mv
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