Códigode barra de DNA como ferramenta na taxonomia de aves amazônicas

Detalhes bibliográficos
Ano de defesa: 2013
Autor(a) principal: Bezerra, Elisama Franco
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade do Estado do Amazonas
Brasil
UEA
Programa de Pós-Graduação em Biotecnologia e Recursos Naturais da Amazônia
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Barcode - Aves
Aves - Amazônia
Zoologia
Link de acesso: https://ri.uea.edu.br/handle/riuea/2162
Resumo: The DNA barcode has been successfully used in identifying the global avifauna with over 90% accuracy. Correct identification of species is important for the conservation of biodiversity and quantification. Thus this work aims to generate a database of sequences DNA barcode related vouchers deposited in the Collection of Birds from the National Institute for Amazonian Research (INPA) to confirm the reliability of BOLD (The Barcode of Life Data System ) in identifying the species of Amazonian birds with the current taxonomy. A sample was selected by species of Tissue Collection of the National Institute for Amazonian Research (INPA), totaling 422 samples from birds. The gene used as the DNA barcode is a mitochondrial cytochrome c oxidase gene 1 (COI). Validation of the gene COI barcode DNA as a tool for taxonomic identification of bird species in the Amazon, we had 72.9% of species identified correctly. Among the 407 species with DNA sequenced, 90 are unpublished sequences for BOLD. In 20 samples were indentificados taxonomic errors and only two samples identified the BOLD wrong. The DNA barcode interacts between the Classical and Molecular taxonomy for accurate identification of species. The results of this study demonstrate that taxonomic tool as the DNA barcode can be used for molecular identification of birds in the Amazon. Despite the lack of DNA sequences of Amazonian birds in the BOLD database, the species studied in this work showed 93.5% to 100% reliability, demonstrating the resolving power of this tool
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spelling Códigode barra de DNA como ferramenta na taxonomia de aves amazônicasDNA bar code as a tool in the taxonomy of Amazonian birdsBarcode - AvesAves - AmazôniaZoologiaThe DNA barcode has been successfully used in identifying the global avifauna with over 90% accuracy. Correct identification of species is important for the conservation of biodiversity and quantification. Thus this work aims to generate a database of sequences DNA barcode related vouchers deposited in the Collection of Birds from the National Institute for Amazonian Research (INPA) to confirm the reliability of BOLD (The Barcode of Life Data System ) in identifying the species of Amazonian birds with the current taxonomy. A sample was selected by species of Tissue Collection of the National Institute for Amazonian Research (INPA), totaling 422 samples from birds. The gene used as the DNA barcode is a mitochondrial cytochrome c oxidase gene 1 (COI). Validation of the gene COI barcode DNA as a tool for taxonomic identification of bird species in the Amazon, we had 72.9% of species identified correctly. Among the 407 species with DNA sequenced, 90 are unpublished sequences for BOLD. In 20 samples were indentificados taxonomic errors and only two samples identified the BOLD wrong. The DNA barcode interacts between the Classical and Molecular taxonomy for accurate identification of species. The results of this study demonstrate that taxonomic tool as the DNA barcode can be used for molecular identification of birds in the Amazon. Despite the lack of DNA sequences of Amazonian birds in the BOLD database, the species studied in this work showed 93.5% to 100% reliability, demonstrating the resolving power of this toolO Código de barra de DNA tem sido utilizado com sucesso na identificação da avifauna global com mais de 90% de acerto. A identificação correta das espécies é importante para a conservação e quantificação da biodiversidade. Com isso esté trabalho tem como objetivo gerar um banco de dados de sequências do códigode barras de DNA relacionadas à vouchers depositados na Coleção de Aves do Instituto Nacional de Pesquisa da Amazônia (INPA) para confirmar a confiabilidade do BOLD (The Barcode of Life Data System) na identificação das espécies de aves amazônicas com a taxonomia vigente. Foi selecionada uma amostra por espécie da Coleção de Tecidos do Instituto Nacional de Pesquisa da Amazônia (INPA), totalizando 422 amostras de aves. O gene utilizado como código de barra de DNA é o gene mitocondrial Citocromo C Oxidase 1 (COI). Na validação do gene COI do código de barra de DNA como ferramenta taxonômica para identificação de espécies de aves da Amazônia, obtivemos 72.9% de espécies identificadas corretamente. Dentre as 407 espécies com DNA sequenciado, 90 são sequências inéditas para o BOLD. Em 20 amostras foram indentificados erros taxonomicos e somente duas amostras o BOLD identificou errado. O Códigode barra de DNA interage entre a Taxonômia Clássica e Molecular para uma identificação precisa das espécies. Os resultados do presente trabalho demostraram que como ferramenta taxonômica, o DNA barcode pode ser usado para a identificação molecular de aves da Amazônia. Apesar da falta de sequências de DNA de aves amazônicas no banco de dados do BOLD, as espécies estudadas neste trabalho apresentaram de 93,5% a 100% de confiabilidade, demonstrando o poder resolutivo desta ferramenta.Universidade do Estado do AmazonasBrasilUEAPrograma de Pós-Graduação em Biotecnologia e Recursos Naturais da AmazôniaRezende, Cleiton FantinRibas , Camila C.Rezende , Cleiton FantinBezerra, Elisama Franco2020-03-13T14:34:10Z2024-09-05T17:30:11Z2020-03-132020-03-13T14:34:10Z2013-09-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttps://ri.uea.edu.br/handle/riuea/2162porARBELÁ EZ-CORTÉ S, E., NAVARRO-SIGU ENZA, A., & GARCÍA-MORENO, J. Phylogeny of woodcreepers of the genus Lepidocolaptes (Aves, Furnariidae), a widespread Neotropical taxon. Zoologica Scripta, pp. 1-11. 2012. ALEIXO, A. “Conceitos de espécie e o eterno conflito entre continuidade e operacionalidade: uma proposta de normatização de critérios para o reconhecimento de espécies pelo Comitê Brasileiro de Registros Ornitológicos.” Revista Brasileira de Ornitologia 15, n. 2: 297-310. 2007. AMORIM, D. S. “Elementos Basicos de Sistemática Filogenética”. 2 Edição. Ribeirão Preto: Holos, Editora e Sociedade Brasileira de Entomologia, 1997. BLAXTER, M.L. “The promise of a DNA taxonomy.” Phil. Trans. R. Soc. Lond. B (359): 669–679. 2004. BOLDSYSTEMS- The Barcode of Life Database http://www.boldsystems.org/ CAMPAGNA, L., LIJTMAER, D. A., Kerr, K., BARREIRA, A. S., HEBERT, P., LOUGHEED, S. Barcode provide new evidence of a recent radiation in the genus Sporophila (Aves: Passeriformes). Molecular Ecology Resources, 10, pp. 449-458. 2010. CBRO. Comitê Brasileiro de Registros Ornitológicos. Disponível em http://www.cbro.org.br Acessado em 23/09/11. 2011. CHEN, J., LI, Q., KONG, L., YU, H.. How Barcode Complement Taxonomy and Explore Species Diversity: The Case Study of a Poorly Understood Marine Fauna. Plos One , 6 (6), 1- 9. 2011. COHN-HAFT, M.. A case study in Amazonian biogeography: Vocal and DNA-sequence variation in Hemitriccus flycatchers. Ph.D.dissertation, Louisiana State University, Baton Rouge. 2000. DAYRAT, B.. “Towards integrative taxonomy.” Biological Journal of the Linnean Society 85: 407-415. 2005 DeSALLE, R., EGAN, M. G.,; SIDDALL, M. . The unholy trinity: taxonomy, species delimitation and DNA barcoding. Phil. Trans. R. Soc. B, 360, 1905-1916. 2005. DINCA, V., ZAKHAROV, E. V., HEBERT, P. D.,; VILA, R. . Complete Barcode reference library for a country’s butterfly fauna reveals high performance for temperate Europe. Proc. R. Soc. B, 278, 347-355. 2011. EDDY, S. R. Profile Hidden Markov models. Bioinformatics Review , 13 (9), pp. 755-763. 1998. FUNK, D. J., e OMLAND, K. E.. SPECIES-LEVEL PARAPHYLY AND POLYPHYLY: Frequency, Causes, and Consequences, with Insights from Animal Mitochondrial DNA. Annu. Rev. Ecol. Evol. Syst., 34, pp. 397-423. 2003. 48 FELSENSTEIN, J.F. “Confidence limits on phylogenies: an approach using the bootstrap”. Evolution, v. 39, p. 783-791. 1985. GOLDSTEIN, P. Z., & DeSALLE, R.. Integrating Barcode data and taxonomic practice: Determination, discovery, and description. WILEY Periodicals, Inc. Bioessays, 33, 135-147. 2010. GONÇALVES, P. F.M. “O potencial do Barcode na identificação de espécies de aves neotropicais.” Dissertação apresentada ao Instituto de Biociências da Universidade de São Paulo, para a obtenção de Titulo de Mestre em Ciências, na área de Biologia/Genética., 97p. 2009. HALL, T. A. “BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT”. Nucleic Acids Symp., n. 41, p. 95-98. 1999. HAJIBABAEI, M.; S., GREGORY A.C.; HEBERT, P. D.N. e HICKEY, D.l A.. “DNA barcoding: how it complements taxonomy, molecular phylogenetics and population genetics.” Trends In Genetics 23, n. 4: 167-172. 2007. HEBERT, P. D. N, CYWINSKA, A.;. BALL, S. L; De WAARD J. R. “Biological identifications through Barcodes.” Proc R Soc Lond B (270): 313-322. 2003a. HEBERT, P. D. N.; RATNASINGHAM, S.; DeWAARD, J. R.. “Barcoding animal life: cytochrome C oxidase subunit 1 divergences among closely related species.” Proc Biol Sci (270): 96-99. 2003b. HEBERT, P. D. N.; STOECKLE, M. Y.; ZEMLAK, T. S. and FRANCIS, C. M.. “Identification of Birds through Barcodes.” PLoS BIOLOGY (2), no. 10 : 1657-1663. 2004b. HEBERT, P. D.N.; PENTON, E.H; BURNS, J. M.; JANZEN, D.H. and HALLWACHS, W. “Ten species in one: DNA barcoding reveals cryptic.” PNAS, 12-October: 1-6. 2004a. IVANOVA, N., ZEMLAK, T. S., HANNER, R. H., & HEBERT, P. D. Universal primer cocktails for fish DNA barcoding. Molecular Ecology Notes , 7, pp. 544-548. 2007. KERR, K.C. R.; STOECKLE, M.Y.; DOVE, C.J.;. WEIGT, L. A; FRANCIS, C. M. e HEBERT. P.D. N. “Comprehensive Barcode coverage of North American Birds.” Molecular Ecology Notes (7): 535-543. 2007. KERR, K. C., BIRKS, S. M., KALYAKIN, M. V., RED'KIN, Y. A., KOBLIK, E. A., HEBERT, P. D. Filling the gap - COI barcode resolution in eastern Palearctic birds. Frontiers in Zoology, 6 (29), 1-13. 2009. KIMURA, M. “A Simple Method for Estimating Evolutionary Rates of Base Substitutions Through Comparative Studies of Nucleotide Sequences.” Journal of Molecular Evolution (11): 111- 120. 1980. 49 LIJTMAER, D. A.,; Kerr, K.C. R.; Barreira, A.S.; Hebert, P. D. N. and TUBARO, P.L.. “Barcode Libraries Provide Insight into Continental Patterns of Avian Diversification.” PLoS ONE 6 (7): e20744. doi:10.1371/journal.pone.0020744 6, n. 7 (July). 2011. MEYER, C. P. e PAULAY, G. “DNA barcoding: Error Rates Based on Comprehensive Sampling.” PLoS Biology 3, n. 12 (December): p422. 2005. MORITZ, C. e CICERO, C. “DNA barcoding: Promise and Pitfalls.” PLoS Biology, 1- Outober: 1529-1531. 2004. NARO-MACIEL, E., REID, B., FITZSIMMONS, N. N., LE, M., DESALLE, R., & AMATO, G. DNA barcode for globally threatened marine turtles: a registry approach to documenting biodiversity. Molecular Ecology Resources, 10, 252–263. 2010. OUTLAW, D. C., VOELKER, G., MILA, B.,; GIRMAN, D. J. Evolution Of Long-Distance Migration In And Historical Biogeography Of Catharus Thrushes: A Molecular Phylogenetic Approach. The Auk, 120 (2), pp. 299-310. 2003. OUELLET, H. Bicknell's Thrush: taxonomic status and distribution. Wilson Bull 105:545– 572. 1993. PLATT, A.R.; WOODHALL, R.W.; GEORGE J.R. “Improved DNA sequencing quality and efficiency using an optimized fast cycle sequencing protocol”. Biotechniques n. 43, p.58-62. 2007. RATNASINGHAM, S.; HEBERT, P.N. “BOLD: The Barcode of Life Data System (www.barcodinglife.org).” Molecular Ecology Notes, 1-10. 2007. ROBBINS, M. B., BRAUN, M., HUDDLESTON, C. J., FINCH, D. W., & MILENSKY, C. M. First Guyana records, natural history and systematics of the White-naped Seedeater Dolospingus fringilloides. Ibis, pp. 334-341. 2005. ROSENBERG, N. A.. Statistical Tests For Taxonomic Distinctiveness From Observations Of Monophyly. Evolution, pp. 317-323. 2007. RUBINOFF, D. e HOLLAND, B.S. “Between Two Extremes: Mitochondrial DNA is neither the Panacea nor the Nemesis of Phylogenetic and Taxonomic Inference.” Syst. Biol. 54, (6): 952-961. 2005.’ SAITOU, N.; NEI, M.. “The Neighbor-joining Method: A New Method for Reconstructing Phylogenetic Trees.” Mol. Biol. Evol. 4,(4): 406-425. 1987. SANGER, F., NICKLEN, S., COULSON, A.R. “DNA Sequencing with chain terminating inhibitors”. Proc. Natl. Acad. Sci. USA, n. 74, p. 5463-5467. 1977. STOECKLE, M. Y., & KERR, K. C. Frequency Matrix Approach Demonstrates High Sequence Quality in Avian Barcode and Highlights Cryptic Pseudogenes. PLOS ONE, 7 (8), pp. 1-9.2012. 50 TAMURA, K., PETERSON, D., PETERSON, N., STECHER, G., NEI, M. and KUMAR, S. MEGA 5. Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution doi: 10.1093/molbev/msr121. 2011. TAVARES, E. S., BAKER, A. J. Single mitochondrial gene barcode reliably identify sisterspecies in diverse clades of birds. BMC Evolutionary Biology, 8 (81), 1-14.2008. TAVARES, E. S.; GONÇALVES, P.; MIYAKI, C.Y. e BAKER, A.J. “Barcode Detects High Genetic Structure within Neotropical Bird Species.” PLoS ONE 6, n. 12 (December): 1-13, 2011. TAUTZ, D., ARCTANDER, P., MINELLI, A., THOMAS, R. H., VOGLER, A. P. “A plea for DNA taxonomy”. TRENDS in Ecology and Evolution Vol.18 No.2: 70-74. 2003. TELLO, J. G., e BATES, J. M. Molecular Phylogenetics Of The Tody-Tyrant And Flatbill Assemblage Of Tyrant Flycatchers (Tyrannidae). The Auk, 1. 2007. THOMPSON, J.D.; HIGGINS, D.G.; GIBSON, T.J. “CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positionspecific gap penalties and weight matrix choice”. Nucleic Acids Res., v. 22, 4673– 4680. 1994. VILAÇA, S.T.,; LACERDA, D.R.; SARI, E.H. R. e SANTOS, F.R.. “DNA-based identification applied to Thamnophilidae (Passeriformes) species: the first barcodes of Neotropical birds.” Revista Brasileira de Ornitologia 14, n. 1 (março): 7-13. 2006. VOGLER, A. P., e MONAGHAN, M. Recent advances in DNA taxonomy. J Zool Syst Evol Res, 45 (1), 1-10. 2007. WILSON, J., ROUGERIE, R., SCHONFELD, J., JANZEN, D., HALLWACHS, W., HAJIBABAEI, M., When species matches are unavailable are Barcodecorrectly assigned to higher taxa? An assessment using sphingid moths. BMC Ecology, pp. 11-18. 2011.Atribuição-NãoComercial-SemDerivados 3.0 Brasilinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da Universidade do Estado do Amazonas (UEA)instname:Universidade do Estado do Amazonas (UEA)instacron:UEA2024-09-05T17:59:27Zoai:ri.uea.edu.br:riuea/2162Repositório InstitucionalPUBhttps://ri.uea.edu.br/server/oai/requestbibliotecacentral@uea.edu.bropendoar:2024-09-05T17:59:27Repositório Institucional da Universidade do Estado do Amazonas (UEA) - Universidade do Estado do Amazonas (UEA)false
dc.title.none.fl_str_mv Códigode barra de DNA como ferramenta na taxonomia de aves amazônicas
DNA bar code as a tool in the taxonomy of Amazonian birds
title Códigode barra de DNA como ferramenta na taxonomia de aves amazônicas
spellingShingle Códigode barra de DNA como ferramenta na taxonomia de aves amazônicas
Bezerra, Elisama Franco
Barcode - Aves
Aves - Amazônia
Zoologia
title_short Códigode barra de DNA como ferramenta na taxonomia de aves amazônicas
title_full Códigode barra de DNA como ferramenta na taxonomia de aves amazônicas
title_fullStr Códigode barra de DNA como ferramenta na taxonomia de aves amazônicas
title_full_unstemmed Códigode barra de DNA como ferramenta na taxonomia de aves amazônicas
title_sort Códigode barra de DNA como ferramenta na taxonomia de aves amazônicas
author Bezerra, Elisama Franco
author_facet Bezerra, Elisama Franco
author_role author
dc.contributor.none.fl_str_mv Rezende, Cleiton Fantin
Ribas , Camila C.
Rezende , Cleiton Fantin
dc.contributor.author.fl_str_mv Bezerra, Elisama Franco
dc.subject.por.fl_str_mv Barcode - Aves
Aves - Amazônia
Zoologia
topic Barcode - Aves
Aves - Amazônia
Zoologia
description The DNA barcode has been successfully used in identifying the global avifauna with over 90% accuracy. Correct identification of species is important for the conservation of biodiversity and quantification. Thus this work aims to generate a database of sequences DNA barcode related vouchers deposited in the Collection of Birds from the National Institute for Amazonian Research (INPA) to confirm the reliability of BOLD (The Barcode of Life Data System ) in identifying the species of Amazonian birds with the current taxonomy. A sample was selected by species of Tissue Collection of the National Institute for Amazonian Research (INPA), totaling 422 samples from birds. The gene used as the DNA barcode is a mitochondrial cytochrome c oxidase gene 1 (COI). Validation of the gene COI barcode DNA as a tool for taxonomic identification of bird species in the Amazon, we had 72.9% of species identified correctly. Among the 407 species with DNA sequenced, 90 are unpublished sequences for BOLD. In 20 samples were indentificados taxonomic errors and only two samples identified the BOLD wrong. The DNA barcode interacts between the Classical and Molecular taxonomy for accurate identification of species. The results of this study demonstrate that taxonomic tool as the DNA barcode can be used for molecular identification of birds in the Amazon. Despite the lack of DNA sequences of Amazonian birds in the BOLD database, the species studied in this work showed 93.5% to 100% reliability, demonstrating the resolving power of this tool
publishDate 2013
dc.date.none.fl_str_mv 2013-09-15
2020-03-13T14:34:10Z
2020-03-13
2020-03-13T14:34:10Z
2024-09-05T17:30:11Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://ri.uea.edu.br/handle/riuea/2162
url https://ri.uea.edu.br/handle/riuea/2162
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv ARBELÁ EZ-CORTÉ S, E., NAVARRO-SIGU ENZA, A., & GARCÍA-MORENO, J. Phylogeny of woodcreepers of the genus Lepidocolaptes (Aves, Furnariidae), a widespread Neotropical taxon. Zoologica Scripta, pp. 1-11. 2012. ALEIXO, A. “Conceitos de espécie e o eterno conflito entre continuidade e operacionalidade: uma proposta de normatização de critérios para o reconhecimento de espécies pelo Comitê Brasileiro de Registros Ornitológicos.” Revista Brasileira de Ornitologia 15, n. 2: 297-310. 2007. AMORIM, D. S. “Elementos Basicos de Sistemática Filogenética”. 2 Edição. Ribeirão Preto: Holos, Editora e Sociedade Brasileira de Entomologia, 1997. BLAXTER, M.L. “The promise of a DNA taxonomy.” Phil. Trans. R. Soc. Lond. B (359): 669–679. 2004. BOLDSYSTEMS- The Barcode of Life Database http://www.boldsystems.org/ CAMPAGNA, L., LIJTMAER, D. A., Kerr, K., BARREIRA, A. S., HEBERT, P., LOUGHEED, S. Barcode provide new evidence of a recent radiation in the genus Sporophila (Aves: Passeriformes). Molecular Ecology Resources, 10, pp. 449-458. 2010. CBRO. Comitê Brasileiro de Registros Ornitológicos. Disponível em http://www.cbro.org.br Acessado em 23/09/11. 2011. CHEN, J., LI, Q., KONG, L., YU, H.. How Barcode Complement Taxonomy and Explore Species Diversity: The Case Study of a Poorly Understood Marine Fauna. Plos One , 6 (6), 1- 9. 2011. COHN-HAFT, M.. A case study in Amazonian biogeography: Vocal and DNA-sequence variation in Hemitriccus flycatchers. Ph.D.dissertation, Louisiana State University, Baton Rouge. 2000. DAYRAT, B.. “Towards integrative taxonomy.” Biological Journal of the Linnean Society 85: 407-415. 2005 DeSALLE, R., EGAN, M. G.,; SIDDALL, M. . The unholy trinity: taxonomy, species delimitation and DNA barcoding. Phil. Trans. R. Soc. B, 360, 1905-1916. 2005. DINCA, V., ZAKHAROV, E. V., HEBERT, P. D.,; VILA, R. . Complete Barcode reference library for a country’s butterfly fauna reveals high performance for temperate Europe. Proc. R. Soc. B, 278, 347-355. 2011. EDDY, S. R. Profile Hidden Markov models. Bioinformatics Review , 13 (9), pp. 755-763. 1998. FUNK, D. J., e OMLAND, K. E.. SPECIES-LEVEL PARAPHYLY AND POLYPHYLY: Frequency, Causes, and Consequences, with Insights from Animal Mitochondrial DNA. Annu. Rev. Ecol. Evol. Syst., 34, pp. 397-423. 2003. 48 FELSENSTEIN, J.F. “Confidence limits on phylogenies: an approach using the bootstrap”. Evolution, v. 39, p. 783-791. 1985. GOLDSTEIN, P. Z., & DeSALLE, R.. Integrating Barcode data and taxonomic practice: Determination, discovery, and description. WILEY Periodicals, Inc. Bioessays, 33, 135-147. 2010. GONÇALVES, P. F.M. “O potencial do Barcode na identificação de espécies de aves neotropicais.” Dissertação apresentada ao Instituto de Biociências da Universidade de São Paulo, para a obtenção de Titulo de Mestre em Ciências, na área de Biologia/Genética., 97p. 2009. HALL, T. A. “BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT”. Nucleic Acids Symp., n. 41, p. 95-98. 1999. HAJIBABAEI, M.; S., GREGORY A.C.; HEBERT, P. D.N. e HICKEY, D.l A.. “DNA barcoding: how it complements taxonomy, molecular phylogenetics and population genetics.” Trends In Genetics 23, n. 4: 167-172. 2007. HEBERT, P. D. N, CYWINSKA, A.;. BALL, S. L; De WAARD J. R. “Biological identifications through Barcodes.” Proc R Soc Lond B (270): 313-322. 2003a. HEBERT, P. D. N.; RATNASINGHAM, S.; DeWAARD, J. R.. “Barcoding animal life: cytochrome C oxidase subunit 1 divergences among closely related species.” Proc Biol Sci (270): 96-99. 2003b. HEBERT, P. D. N.; STOECKLE, M. Y.; ZEMLAK, T. S. and FRANCIS, C. M.. “Identification of Birds through Barcodes.” PLoS BIOLOGY (2), no. 10 : 1657-1663. 2004b. HEBERT, P. D.N.; PENTON, E.H; BURNS, J. M.; JANZEN, D.H. and HALLWACHS, W. “Ten species in one: DNA barcoding reveals cryptic.” PNAS, 12-October: 1-6. 2004a. IVANOVA, N., ZEMLAK, T. S., HANNER, R. H., & HEBERT, P. D. Universal primer cocktails for fish DNA barcoding. Molecular Ecology Notes , 7, pp. 544-548. 2007. KERR, K.C. R.; STOECKLE, M.Y.; DOVE, C.J.;. WEIGT, L. A; FRANCIS, C. M. e HEBERT. P.D. N. “Comprehensive Barcode coverage of North American Birds.” Molecular Ecology Notes (7): 535-543. 2007. KERR, K. C., BIRKS, S. M., KALYAKIN, M. V., RED'KIN, Y. A., KOBLIK, E. A., HEBERT, P. D. Filling the gap - COI barcode resolution in eastern Palearctic birds. Frontiers in Zoology, 6 (29), 1-13. 2009. KIMURA, M. “A Simple Method for Estimating Evolutionary Rates of Base Substitutions Through Comparative Studies of Nucleotide Sequences.” Journal of Molecular Evolution (11): 111- 120. 1980. 49 LIJTMAER, D. A.,; Kerr, K.C. R.; Barreira, A.S.; Hebert, P. D. N. and TUBARO, P.L.. “Barcode Libraries Provide Insight into Continental Patterns of Avian Diversification.” PLoS ONE 6 (7): e20744. doi:10.1371/journal.pone.0020744 6, n. 7 (July). 2011. MEYER, C. P. e PAULAY, G. “DNA barcoding: Error Rates Based on Comprehensive Sampling.” PLoS Biology 3, n. 12 (December): p422. 2005. MORITZ, C. e CICERO, C. “DNA barcoding: Promise and Pitfalls.” PLoS Biology, 1- Outober: 1529-1531. 2004. NARO-MACIEL, E., REID, B., FITZSIMMONS, N. N., LE, M., DESALLE, R., & AMATO, G. DNA barcode for globally threatened marine turtles: a registry approach to documenting biodiversity. Molecular Ecology Resources, 10, 252–263. 2010. OUTLAW, D. C., VOELKER, G., MILA, B.,; GIRMAN, D. J. Evolution Of Long-Distance Migration In And Historical Biogeography Of Catharus Thrushes: A Molecular Phylogenetic Approach. The Auk, 120 (2), pp. 299-310. 2003. OUELLET, H. Bicknell's Thrush: taxonomic status and distribution. Wilson Bull 105:545– 572. 1993. PLATT, A.R.; WOODHALL, R.W.; GEORGE J.R. “Improved DNA sequencing quality and efficiency using an optimized fast cycle sequencing protocol”. Biotechniques n. 43, p.58-62. 2007. RATNASINGHAM, S.; HEBERT, P.N. “BOLD: The Barcode of Life Data System (www.barcodinglife.org).” Molecular Ecology Notes, 1-10. 2007. ROBBINS, M. B., BRAUN, M., HUDDLESTON, C. J., FINCH, D. W., & MILENSKY, C. M. First Guyana records, natural history and systematics of the White-naped Seedeater Dolospingus fringilloides. Ibis, pp. 334-341. 2005. ROSENBERG, N. A.. Statistical Tests For Taxonomic Distinctiveness From Observations Of Monophyly. Evolution, pp. 317-323. 2007. 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dc.rights.driver.fl_str_mv Atribuição-NãoComercial-SemDerivados 3.0 Brasil
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Atribuição-NãoComercial-SemDerivados 3.0 Brasil
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dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade do Estado do Amazonas
Brasil
UEA
Programa de Pós-Graduação em Biotecnologia e Recursos Naturais da Amazônia
publisher.none.fl_str_mv Universidade do Estado do Amazonas
Brasil
UEA
Programa de Pós-Graduação em Biotecnologia e Recursos Naturais da Amazônia
dc.source.none.fl_str_mv reponame:Repositório Institucional da Universidade do Estado do Amazonas (UEA)
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reponame_str Repositório Institucional da Universidade do Estado do Amazonas (UEA)
collection Repositório Institucional da Universidade do Estado do Amazonas (UEA)
repository.name.fl_str_mv Repositório Institucional da Universidade do Estado do Amazonas (UEA) - Universidade do Estado do Amazonas (UEA)
repository.mail.fl_str_mv bibliotecacentral@uea.edu.br
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