Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong.

Detalhes bibliográficos
Ano de defesa: 2023
Autor(a) principal: Paiva, Iracema de Azevedo Monte lattes
Orientador(a): Fernandes Júnior, Paulo Ivan lattes
Banca de defesa: Ribeiro, Paula Rose de Almeida
Tipo de documento: Dissertação
Tipo de acesso: Acesso embargado
Idioma: por
Instituição de defesa: Universidade Estadual da Paraíba
Programa de Pós-Graduação: Programa de Pós-Graduação em Ciências Agrárias - PPGCA
Departamento: Pró-Reitoria de Pós-Graduação e Pesquisa - PRPGP
País: BR
Palavras-chave em Português:
Área do conhecimento CNPq:
Link de acesso: https://repositorio.uepb.edu.br/handle/123456789/75473
Resumo: Enterolobium contortisiliquum (Vell.) Morong., known as monkfish or monkey, is a legume native to Brazil that occurs from the north to the south of the country. It has a rustic character and adaptability to the edaphoclimatic conditions of the Brazilian semiarid region. Monkfish is a promising species for recovering degraded areas and establishing symbiosis with nitrogen-fixing bacteria. Noduliferous bacteria in legumes are popularly known as rhizobia, in which they are responsible for up to 100% of biological nitrogen fixation. The search for the selection of efficient rhizobia for the production of inoculants appears as an economic, ecological, and sustainable alternative because of the environmental impacts and the high costs of using nitrogen fertilizers. This work aimed to evaluate the genetic diversity of rhizobia isolated from Enterolobium contortisiliquum nodules from soils in the semiarid region of Pernambuco State. Soils were collected in five municipalities of Pernambuco State: Betânia, Parnamirim, Santa Cruz, Santa Maria da Boa Vista, and Serra Talhada. An experiment was set up under nursery conditions to capture the isolates, using monkfish as a trap plant. After 95 days of experimenting, the nodules were collected, and a superficial disinfestation was carried out. The material was spread in streaks to obtain single colonies in Petri dishes with YMA medium. The isolates obtained were genetically characterized by analysis of fragment amplification of the symbiotic genes nifH and nodC using the DuplexPCR, BOX-PCR, ARDRA and partial sequencing of the 16S rRNA gene. A collection of 207 bacteria was obtained from analyzing 127 nodules. Soil from the municipality of Betânia had the highest number of isolates (56), followed by Parnamirim (55), Serra Talhada (43 isolados), Santa Cruz (31) and Santa Maria da Boa Vista (22). In the analysis of genetic variability by BOX-PCR, the monkfish isolates showed different band profiles, demonstrating high genetic diversity. The 32 isolates that were selected for partial sequencing of the 16S rRNA gene were identified in the following genera: Rhizobium (17), Agrobacterium (3), Bradyrhizobium (2), and Paraburkholderia (1). Non-rhizobial isolates belonging to the genera: Pseudomonas (2), Brucella (2), Labrys (2), Pleomorphomonas (1), Bacillus (1), and Siphonobacter (1) were also identified. These results demonstrate that rhizobia isolated from monkfish root nodules from soils in different semiarid regions of Pernambuco State belong to alpha (Rhizobium, Agrobacterium e Bradyrhizobium) and beta-rhizobia (Paraburkholderia). However, there is a predominance of bacteria belonging to the genus Rhizobium, mainly related to the species R. dioscoreae S-93T (99.09 - 100% similarity).
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spelling 2023-07-21T12:33:59Z2026-03-04T12:13:42Z2999-12-312023-04-14PAIVA, Iracema de Azevedo Monte. Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong. 2023. 77 f. Dissertação (Programa de Pós-Graduação em Ciências Agrárias - PPGCA) - Universidade Estadual da Paraíba, Campina Grande, 2023.https://repositorio.uepb.edu.br/handle/123456789/7547324004014012P5Enterolobium contortisiliquum (Vell.) Morong., known as monkfish or monkey, is a legume native to Brazil that occurs from the north to the south of the country. It has a rustic character and adaptability to the edaphoclimatic conditions of the Brazilian semiarid region. Monkfish is a promising species for recovering degraded areas and establishing symbiosis with nitrogen-fixing bacteria. Noduliferous bacteria in legumes are popularly known as rhizobia, in which they are responsible for up to 100% of biological nitrogen fixation. The search for the selection of efficient rhizobia for the production of inoculants appears as an economic, ecological, and sustainable alternative because of the environmental impacts and the high costs of using nitrogen fertilizers. This work aimed to evaluate the genetic diversity of rhizobia isolated from Enterolobium contortisiliquum nodules from soils in the semiarid region of Pernambuco State. Soils were collected in five municipalities of Pernambuco State: Betânia, Parnamirim, Santa Cruz, Santa Maria da Boa Vista, and Serra Talhada. An experiment was set up under nursery conditions to capture the isolates, using monkfish as a trap plant. After 95 days of experimenting, the nodules were collected, and a superficial disinfestation was carried out. The material was spread in streaks to obtain single colonies in Petri dishes with YMA medium. The isolates obtained were genetically characterized by analysis of fragment amplification of the symbiotic genes nifH and nodC using the DuplexPCR, BOX-PCR, ARDRA and partial sequencing of the 16S rRNA gene. A collection of 207 bacteria was obtained from analyzing 127 nodules. Soil from the municipality of Betânia had the highest number of isolates (56), followed by Parnamirim (55), Serra Talhada (43 isolados), Santa Cruz (31) and Santa Maria da Boa Vista (22). In the analysis of genetic variability by BOX-PCR, the monkfish isolates showed different band profiles, demonstrating high genetic diversity. The 32 isolates that were selected for partial sequencing of the 16S rRNA gene were identified in the following genera: Rhizobium (17), Agrobacterium (3), Bradyrhizobium (2), and Paraburkholderia (1). Non-rhizobial isolates belonging to the genera: Pseudomonas (2), Brucella (2), Labrys (2), Pleomorphomonas (1), Bacillus (1), and Siphonobacter (1) were also identified. These results demonstrate that rhizobia isolated from monkfish root nodules from soils in different semiarid regions of Pernambuco State belong to alpha (Rhizobium, Agrobacterium e Bradyrhizobium) and beta-rhizobia (Paraburkholderia). However, there is a predominance of bacteria belonging to the genus Rhizobium, mainly related to the species R. dioscoreae S-93T (99.09 - 100% similarity).Enterolobium contortisiliquum (Vell.) Morong., conhecida como tamboril ou orelha de macaco, é uma leguminosa nativa do Brasil que ocorre do norte ao sul do país. Apresenta característica rústica e adaptabilidade para as condições edafoclimáticas do Semiárido brasileiro. Tamboril é uma espécie promissora para a recuperação de áreas degradadas, e estabelece simbiose com bactérias fixadoras de nitrogênio (BFN). As BFN nodulíferas em leguminosas são popularmente conhecidas como rizóbios, no qual, são responsáveis por até 100% da fixação biológica de nitrogênio. A busca pela seleção de rizóbios eficientes, para a produção de inoculantes, surge como uma alternativa econômica, ecológica e sustentável, por causa dos impactos ambientais e dos altos custos no uso de fertilizantes nitrogenados. Esse trabalho teve como objetivo avaliar a diversidade genética de rizóbios isolados de nódulos de Enterolobium contortisiliquum, oriundos de solos do Semiárido pernambucano. Foram coletados solos em cinco municípios de Pernambuco: Betânia, Parnamirim, Santa Cruz, Santa Maria da Boa Vista e Serra Talhada. Para a captura dos isolados, foi montado um experimento, em condições de viveiro, utilizando tamboril como planta-isca. Após 95 dias de condução do experimento os nódulos foram coletados e realizado a desinfestação superficial. Para a obtenção de culturas puras, foramrealizadas sucessivas repicagens em placas de Petri com meio YMA. Os isolados obtidos foram caracterizados geneticamente por meio das análises de amplificação de fragmentos dos genes simbióticos nifH e nodC pela técnica de Duplex-PCR, as técnicas de BOX-PCR e ARDRA e sequenciamento parcial do gene 16S rRNA. Foi obtida uma coleção com 207 isolados bacterianos, a partir da análise de 127 nódulos. O solo oriundo do município de Betânia apresentou a maior quantidade de isolados (56), seguido por Parnamirim (55), Serra Talhada (43 isolados), Santa Cruz (31) e Santa Maria da Boa Vista (22). Na análise da variabilidade genética por BOX-PCR, os isolados de tamboril apresentaram perfis de bandas diversos, demonstrando alta diversidade genética. Os 32 isolados que foram selecionados para o sequenciamento parcial do gene 16S rRNA, foram identificados nos seguintes gêneros: Rhizobium (17), Agrobacterium (3), Bradyrhizobium (2), e Paraburkholderia (1), também foram identificados isolados nãorizobianos, pertencentes aos gêneros: Pseudomonas (2), Brucella (2), Labrys (2), Pleomorphomonas (1), Bacillus (1), e Siphonobacter (1). Esses resultados demonstram que os rizóbios isolados de nódulos radiculares de tamboril, de solos de diferentes localidades do Semiárido pernambucano, pertencem a alfa (Rhizobium, Agrobacterium e Bradyrhizobium) e beta-rizóbios (Paraburkholderia). Porém, ocorre predomínio de bactérias pertencentes ao gênero Rhizobium, principalmente relacionadas a espécie R. dioscoreae S-93T (99,09 - 100% de similaridade)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfUniversidade Estadual da ParaíbaPrograma de Pós-Graduação em Ciências Agrárias - PPGCAUEPBBRPró-Reitoria de Pós-Graduação e Pesquisa - PRPGPPró-Reitoria de Pós-Graduação e Pesquisa - PRPGPBIOLOGIA E FISIOLOGIA DOS MICROORGANISMOSTamborilRizóbiosFixação biológica de nitrogênioGene 16S rRNADiversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) 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dc.title.none.fl_str_mv Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong.
title Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong.
spellingShingle Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong.
Paiva, Iracema de Azevedo Monte
BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOS
Tamboril
Rizóbios
Fixação biológica de nitrogênio
Gene 16S rRNA
title_short Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong.
title_full Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong.
title_fullStr Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong.
title_full_unstemmed Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong.
title_sort Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong.
author Paiva, Iracema de Azevedo Monte
author_facet Paiva, Iracema de Azevedo Monte
author_role author
dc.contributor.referee2.fl_str_mv Ribeiro, Paula Rose de Almeida
dc.contributor.advisor1.fl_str_mv Fernandes Júnior, Paulo Ivan
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/5149478274259227
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/2419652337291392
dc.contributor.author.fl_str_mv Paiva, Iracema de Azevedo Monte
contributor_str_mv Ribeiro, Paula Rose de Almeida
Fernandes Júnior, Paulo Ivan
dc.subject.cnpq.fl_str_mv BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOS
topic BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOS
Tamboril
Rizóbios
Fixação biológica de nitrogênio
Gene 16S rRNA
dc.subject.por.fl_str_mv Tamboril
Rizóbios
Fixação biológica de nitrogênio
Gene 16S rRNA
description Enterolobium contortisiliquum (Vell.) Morong., known as monkfish or monkey, is a legume native to Brazil that occurs from the north to the south of the country. It has a rustic character and adaptability to the edaphoclimatic conditions of the Brazilian semiarid region. Monkfish is a promising species for recovering degraded areas and establishing symbiosis with nitrogen-fixing bacteria. Noduliferous bacteria in legumes are popularly known as rhizobia, in which they are responsible for up to 100% of biological nitrogen fixation. The search for the selection of efficient rhizobia for the production of inoculants appears as an economic, ecological, and sustainable alternative because of the environmental impacts and the high costs of using nitrogen fertilizers. This work aimed to evaluate the genetic diversity of rhizobia isolated from Enterolobium contortisiliquum nodules from soils in the semiarid region of Pernambuco State. Soils were collected in five municipalities of Pernambuco State: Betânia, Parnamirim, Santa Cruz, Santa Maria da Boa Vista, and Serra Talhada. An experiment was set up under nursery conditions to capture the isolates, using monkfish as a trap plant. After 95 days of experimenting, the nodules were collected, and a superficial disinfestation was carried out. The material was spread in streaks to obtain single colonies in Petri dishes with YMA medium. The isolates obtained were genetically characterized by analysis of fragment amplification of the symbiotic genes nifH and nodC using the DuplexPCR, BOX-PCR, ARDRA and partial sequencing of the 16S rRNA gene. A collection of 207 bacteria was obtained from analyzing 127 nodules. Soil from the municipality of Betânia had the highest number of isolates (56), followed by Parnamirim (55), Serra Talhada (43 isolados), Santa Cruz (31) and Santa Maria da Boa Vista (22). In the analysis of genetic variability by BOX-PCR, the monkfish isolates showed different band profiles, demonstrating high genetic diversity. The 32 isolates that were selected for partial sequencing of the 16S rRNA gene were identified in the following genera: Rhizobium (17), Agrobacterium (3), Bradyrhizobium (2), and Paraburkholderia (1). Non-rhizobial isolates belonging to the genera: Pseudomonas (2), Brucella (2), Labrys (2), Pleomorphomonas (1), Bacillus (1), and Siphonobacter (1) were also identified. These results demonstrate that rhizobia isolated from monkfish root nodules from soils in different semiarid regions of Pernambuco State belong to alpha (Rhizobium, Agrobacterium e Bradyrhizobium) and beta-rhizobia (Paraburkholderia). However, there is a predominance of bacteria belonging to the genus Rhizobium, mainly related to the species R. dioscoreae S-93T (99.09 - 100% similarity).
publishDate 2023
dc.date.accessioned.fl_str_mv 2023-07-21T12:33:59Z
2026-03-04T12:13:42Z
dc.date.issued.fl_str_mv 2023-04-14
dc.date.available.fl_str_mv 2999-12-31
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv PAIVA, Iracema de Azevedo Monte. Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong. 2023. 77 f. Dissertação (Programa de Pós-Graduação em Ciências Agrárias - PPGCA) - Universidade Estadual da Paraíba, Campina Grande, 2023.
dc.identifier.uri.fl_str_mv https://repositorio.uepb.edu.br/handle/123456789/75473
dc.identifier.capesdegreeprogramcode.none.fl_str_mv 24004014012P5
identifier_str_mv PAIVA, Iracema de Azevedo Monte. Diversidade de rizóbios nativos de solos do semiárido pernambucano isolados de Enterolobium contortisiliquum (Vell.) Morong. 2023. 77 f. Dissertação (Programa de Pós-Graduação em Ciências Agrárias - PPGCA) - Universidade Estadual da Paraíba, Campina Grande, 2023.
24004014012P5
url https://repositorio.uepb.edu.br/handle/123456789/75473
dc.language.iso.fl_str_mv por
language por
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eu_rights_str_mv embargoedAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Estadual da Paraíba
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Ciências Agrárias - PPGCA
dc.publisher.initials.fl_str_mv UEPB
dc.publisher.country.fl_str_mv BR
dc.publisher.department.fl_str_mv Pró-Reitoria de Pós-Graduação e Pesquisa - PRPGP
Pró-Reitoria de Pós-Graduação e Pesquisa - PRPGP
publisher.none.fl_str_mv Universidade Estadual da Paraíba
dc.source.none.fl_str_mv reponame:Repositório Institucional da Universidade Estadual da Paraíba (UEPB)
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repository.name.fl_str_mv Repositório Institucional da Universidade Estadual da Paraíba (UEPB) - Universidade Estadual da Paraíba (UEPB)
repository.mail.fl_str_mv sibuepb@setor.uepb.edu.br
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