Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos

Detalhes bibliográficos
Ano de defesa: 2016
Autor(a) principal: Braga, Fabrina Seger lattes
Orientador(a): Marques, Elizabeth de Andrade lattes
Banca de defesa: Queiroz, Mara Lucia Penna lattes, Assef, Ana Paula D'alincourt Carvalho lattes, Carvalho, Karyne Rangel lattes
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade do Estado do Rio de Janeiro
Programa de Pós-Graduação: Programa de Pós-Graduação em Microbiologia
Departamento: Centro Biomédico::Faculdade de Ciências Médicas
País: BR
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://www.bdtd.uerj.br/handle/1/14447
Resumo: Stenotrophomonas maltophilia is a non-fermentative Gram negative bacillus frequent in respiratory infections, especially in patients assisted in intensive care units (ICU). It is also an important pulmonary pathogen in cystic fibrosis patients (CF). It is often multidrug resistant exhibiting resistance to a broad antimicrobial spectrum. Fluoroquinolone and trimethoprim/sulfamethoxazole (TMP-SXT) are drugs of choice for the treatment of infections caused by S. maltophilia but increasing resistance has been reported. The aim of the study was to evaluate the susceptibility and the molecular mechanisms responsible for antimicrobial resistance in S. maltophilia strains obtained from CF patients assisted in two CF reference centers and hospitalized non-cystic patients (NCF) assisted in a teaching hospital in Rio de Janeiro, Brazil. A total of 226 isolates from different clinical specimens were identified using conventional methods and evaluated by the Kirby-Bauer disk diffusion method (DD) to levofloxacin, minocycline and trimethoprim/sulfamethoxazole (TMP-SXT). The minimal inhibitory concentration (MIC) of ciprofloxacin (CIP), ceftazidime (CAZ) and TMP-SXT was determined by microdilution method according to Clinical and Laboratory Standard Institute. Polymerase Chain Reaction (PCR) analysis was performed to evaluate the expression of the sul1 (190 samples; 54 CF and 138 NCF) and qnr (A. B, S) (39 samples resistant to CIP). The samples were obtained from different specimens from January 2010 to October 2014. Fifty two samples (23%) were obtained from CF patients and most of all isolated from sputum (92.3%). The majority of 174 samples (n=77%) obtained from NCF patients were isolated from secretion/aspirate tracheal (51.5%), sputum (27%) and blood (12.1%). By DD test all samples (n=52) of CF patients were susceptible to all evaluated antimicrobials. Only 8 (4.6%) S. maltophilia strains isolated from NCF patients were resistant to TMP-SXT and levofloxacin. To determine the MIC we selected samples that showed resistance to any antimicrobial in the DD test; samples isolated from blood and one isolate for each CF patients, totaling 55 samples. Using MIC determination, CIP was the antimicrobial with the highest percentage (70,9%) of resistant strains (70,6% from CF and 76,4% from NCF). The sul1 gene was detected in one sample from NCF patient with high MIC for TMP-SXT (32µg/mL). The qnr genes (A, B and S) were not identified in this study. Most strains of S. maltophilia was isolated from patients NCF. The TMP-SXT is still the best drug of choice for the treatment of infections caused by this species. However, continuous monitoring of resistance to important antibiotics and the use of molecular methods are warranted to provide appropriate antimicrobial regimens for treating S. maltophilia infections.
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spelling Marques, Elizabeth de Andradehttp://lattes.cnpq.br/5959485578597640Queiroz, Mara Lucia Pennahttp://lattes.cnpq.br/1980792659825205Assef, Ana Paula D'alincourt Carvalhohttp://lattes.cnpq.br/5196425284967145Carvalho, Karyne Rangelhttp://lattes.cnpq.br/4204191981666483http://lattes.cnpq.br/0200993487752372Braga, Fabrina Seger2021-01-07T15:16:50Z2016-11-042016-03-11BRAGA, Fabrina Seger. Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos. 2016. 88 f. Dissertação (Mestrado em Microbiologia Médica Humana) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2016.http://www.bdtd.uerj.br/handle/1/14447Stenotrophomonas maltophilia is a non-fermentative Gram negative bacillus frequent in respiratory infections, especially in patients assisted in intensive care units (ICU). It is also an important pulmonary pathogen in cystic fibrosis patients (CF). It is often multidrug resistant exhibiting resistance to a broad antimicrobial spectrum. Fluoroquinolone and trimethoprim/sulfamethoxazole (TMP-SXT) are drugs of choice for the treatment of infections caused by S. maltophilia but increasing resistance has been reported. The aim of the study was to evaluate the susceptibility and the molecular mechanisms responsible for antimicrobial resistance in S. maltophilia strains obtained from CF patients assisted in two CF reference centers and hospitalized non-cystic patients (NCF) assisted in a teaching hospital in Rio de Janeiro, Brazil. A total of 226 isolates from different clinical specimens were identified using conventional methods and evaluated by the Kirby-Bauer disk diffusion method (DD) to levofloxacin, minocycline and trimethoprim/sulfamethoxazole (TMP-SXT). The minimal inhibitory concentration (MIC) of ciprofloxacin (CIP), ceftazidime (CAZ) and TMP-SXT was determined by microdilution method according to Clinical and Laboratory Standard Institute. Polymerase Chain Reaction (PCR) analysis was performed to evaluate the expression of the sul1 (190 samples; 54 CF and 138 NCF) and qnr (A. B, S) (39 samples resistant to CIP). The samples were obtained from different specimens from January 2010 to October 2014. Fifty two samples (23%) were obtained from CF patients and most of all isolated from sputum (92.3%). The majority of 174 samples (n=77%) obtained from NCF patients were isolated from secretion/aspirate tracheal (51.5%), sputum (27%) and blood (12.1%). By DD test all samples (n=52) of CF patients were susceptible to all evaluated antimicrobials. Only 8 (4.6%) S. maltophilia strains isolated from NCF patients were resistant to TMP-SXT and levofloxacin. To determine the MIC we selected samples that showed resistance to any antimicrobial in the DD test; samples isolated from blood and one isolate for each CF patients, totaling 55 samples. Using MIC determination, CIP was the antimicrobial with the highest percentage (70,9%) of resistant strains (70,6% from CF and 76,4% from NCF). The sul1 gene was detected in one sample from NCF patient with high MIC for TMP-SXT (32µg/mL). The qnr genes (A, B and S) were not identified in this study. Most strains of S. maltophilia was isolated from patients NCF. The TMP-SXT is still the best drug of choice for the treatment of infections caused by this species. However, continuous monitoring of resistance to important antibiotics and the use of molecular methods are warranted to provide appropriate antimicrobial regimens for treating S. maltophilia infections.Stenotrophomonas maltophilia é um Bastonete Gram negativo Não Fermentador da Glicose (BGNNF), frequente em infecções respiratórias especialmente em pacientes assistidos em centros de terapia intensiva (CTI). Também se destaca como um patógeno emergente em pacientes com fibrose cística (FC). É frequentemente multirresistente, exibindo resistência a um amplo espectro de antimicrobianos. Fluoroquinolonas e trimetoprima/sulfametoxazol (SXT) são os antimicrobianos de escolha para o tratamento de infecções causadas por S. maltophilia. Entretanto, o aumento na prevalência de cepas resistentes tem sido relatado. O objetivo deste estudo foi avaliar o perfil de sensibilidade e os mecanismos moleculares responsáveis pela resistência aos antimicrobianos em S. maltophilia obtidas de pacientes com FC e pacientes sem fibrose cística (NFC) assistidos em dois centros de referência (FC) e em um hospital universitário (NFC) no Rio de Janeiro. Foram analisadas 226 amostras pelo método de difusão em ágar (DD) para levofloxacina, minociclina e SXT e determinada a concentração inibitória mínima (CIM) por microdiluição em caldo para ciprofloxacina (CIP), ceftazidima (CAZ) e SXT, conforme recomendações do Clinical and Laboratory Standart Institute. O método molecular de Reação em cadeia da Polimerase (PCR) foi utilizado para a pesquisa dos genes sul1 em 190 amostras (52 FC e 138 NFC) e qnr (A, B e S) em 39 amostras não sensíveis (resistente+intermediário) a CIP (24 FC e 15 NFC). As amostras foram obtidas de diferentes espécimes clínicos no período de janeiro de 2010 a outubro de 2014. Cinquenta de duas amostras (23%) foram obtidas de pacientes FC e a maioria isolada de escarro (92,3%). Em pacientes NFC foram isoladas 174 amostras (n=77%) sendo a maioria de secreção/aspirado traqueal (51,5%) e escarro (27%). Pelo teste de DD todas as amostras (n=52) de pacientes FC foram sensíveis aos três antimicrobianos avaliados. Apenas 8 amostras (4,6%) de pacientes NFC foram não sensíveis (6 resistentes e 2 intermediárias) a SXT e a levofloxacina. Para a determinação da CIM foram selecionadas 55 amostras. CIP foi o antimicrobiano com maior percentual de amostras resistentes (70,9%; 70,6% em FC e 76,4% em NFC). O gene sul1 foi identificado em uma amostra de paciente NFC cuja CIM para SXT foi de 32µg/mL. Os genes qnr (A, B e S) não foram identificados no presente estudo. A maioria das amostras de S. maltophilia foi isolada de pacientes NFC.O antimicrobiano SXT ainda é a melhor opção terapêutica para o tratamento de infecções causadas por esta espécie. Contudo, a constante monitorização através de testes de sensibilidade aos antimicrobianos e métodos moleculares se faz necessária.Submitted by Boris Flegr (boris@uerj.br) on 2021-01-07T15:16:50Z No. of bitstreams: 1 Fabrina Seger Braga Dissertacao completa.pdf: 983061 bytes, checksum: 19999a6ef0d9fb87e460323e43818e56 (MD5)Made available in DSpace on 2021-01-07T15:16:50Z (GMT). No. of bitstreams: 1 Fabrina Seger Braga Dissertacao completa.pdf: 983061 bytes, checksum: 19999a6ef0d9fb87e460323e43818e56 (MD5) Previous issue date: 2016-03-11Coordenação de Aperfeiçoamento de Pessoal de Nível Superiorapplication/pdfporUniversidade do Estado do Rio de JaneiroPrograma de Pós-Graduação em MicrobiologiaUERJBRCentro Biomédico::Faculdade de Ciências MédicasStenotrophomonas maltophiliaAntimicrobial resistanceCystic fibrosisStenotrophomonas maltophiliaResistência a antimicrobianosFibrose císticaFibrose císticaStenotrophomonas maltophiliaResistência a antimicrobianosCNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIAStenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianosStenotrophomonas maltophilia isolated from cystic fibrosis and non-cystic fbrosis patients: molecular characterization of antimicrobial resistanceinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UERJinstname:Universidade do Estado do Rio de Janeiro (UERJ)instacron:UERJORIGINALFabrina Seger Braga Dissertacao completa.pdfapplication/pdf983061http://www.bdtd.uerj.br/bitstream/1/14447/1/Fabrina+Seger+Braga+Dissertacao+completa.pdf19999a6ef0d9fb87e460323e43818e56MD511/144472024-02-26 19:54:39.715oai:www.bdtd.uerj.br:1/14447Biblioteca Digital de Teses e Dissertaçõeshttp://www.bdtd.uerj.br/PUBhttps://www.bdtd.uerj.br:8443/oai/requestbdtd.suporte@uerj.bropendoar:29032024-02-26T22:54:39Biblioteca Digital de Teses e Dissertações da UERJ - Universidade do Estado do Rio de Janeiro (UERJ)false
dc.title.por.fl_str_mv Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos
dc.title.alternative.eng.fl_str_mv Stenotrophomonas maltophilia isolated from cystic fibrosis and non-cystic fbrosis patients: molecular characterization of antimicrobial resistance
title Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos
spellingShingle Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos
Braga, Fabrina Seger
Stenotrophomonas maltophilia
Antimicrobial resistance
Cystic fibrosis
Stenotrophomonas maltophilia
Resistência a antimicrobianos
Fibrose cística
Fibrose cística
Stenotrophomonas maltophilia
Resistência a antimicrobianos
CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA
title_short Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos
title_full Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos
title_fullStr Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos
title_full_unstemmed Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos
title_sort Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos
author Braga, Fabrina Seger
author_facet Braga, Fabrina Seger
author_role author
dc.contributor.advisor1.fl_str_mv Marques, Elizabeth de Andrade
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/5959485578597640
dc.contributor.referee1.fl_str_mv Queiroz, Mara Lucia Penna
dc.contributor.referee1Lattes.fl_str_mv http://lattes.cnpq.br/1980792659825205
dc.contributor.referee2.fl_str_mv Assef, Ana Paula D'alincourt Carvalho
dc.contributor.referee2Lattes.fl_str_mv http://lattes.cnpq.br/5196425284967145
dc.contributor.referee3.fl_str_mv Carvalho, Karyne Rangel
dc.contributor.referee3Lattes.fl_str_mv http://lattes.cnpq.br/4204191981666483
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/0200993487752372
dc.contributor.author.fl_str_mv Braga, Fabrina Seger
contributor_str_mv Marques, Elizabeth de Andrade
Queiroz, Mara Lucia Penna
Assef, Ana Paula D'alincourt Carvalho
Carvalho, Karyne Rangel
dc.subject.eng.fl_str_mv Stenotrophomonas maltophilia
Antimicrobial resistance
Cystic fibrosis
topic Stenotrophomonas maltophilia
Antimicrobial resistance
Cystic fibrosis
Stenotrophomonas maltophilia
Resistência a antimicrobianos
Fibrose cística
Fibrose cística
Stenotrophomonas maltophilia
Resistência a antimicrobianos
CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA
dc.subject.por.fl_str_mv Stenotrophomonas maltophilia
Resistência a antimicrobianos
Fibrose cística
Fibrose cística
Stenotrophomonas maltophilia
Resistência a antimicrobianos
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA
description Stenotrophomonas maltophilia is a non-fermentative Gram negative bacillus frequent in respiratory infections, especially in patients assisted in intensive care units (ICU). It is also an important pulmonary pathogen in cystic fibrosis patients (CF). It is often multidrug resistant exhibiting resistance to a broad antimicrobial spectrum. Fluoroquinolone and trimethoprim/sulfamethoxazole (TMP-SXT) are drugs of choice for the treatment of infections caused by S. maltophilia but increasing resistance has been reported. The aim of the study was to evaluate the susceptibility and the molecular mechanisms responsible for antimicrobial resistance in S. maltophilia strains obtained from CF patients assisted in two CF reference centers and hospitalized non-cystic patients (NCF) assisted in a teaching hospital in Rio de Janeiro, Brazil. A total of 226 isolates from different clinical specimens were identified using conventional methods and evaluated by the Kirby-Bauer disk diffusion method (DD) to levofloxacin, minocycline and trimethoprim/sulfamethoxazole (TMP-SXT). The minimal inhibitory concentration (MIC) of ciprofloxacin (CIP), ceftazidime (CAZ) and TMP-SXT was determined by microdilution method according to Clinical and Laboratory Standard Institute. Polymerase Chain Reaction (PCR) analysis was performed to evaluate the expression of the sul1 (190 samples; 54 CF and 138 NCF) and qnr (A. B, S) (39 samples resistant to CIP). The samples were obtained from different specimens from January 2010 to October 2014. Fifty two samples (23%) were obtained from CF patients and most of all isolated from sputum (92.3%). The majority of 174 samples (n=77%) obtained from NCF patients were isolated from secretion/aspirate tracheal (51.5%), sputum (27%) and blood (12.1%). By DD test all samples (n=52) of CF patients were susceptible to all evaluated antimicrobials. Only 8 (4.6%) S. maltophilia strains isolated from NCF patients were resistant to TMP-SXT and levofloxacin. To determine the MIC we selected samples that showed resistance to any antimicrobial in the DD test; samples isolated from blood and one isolate for each CF patients, totaling 55 samples. Using MIC determination, CIP was the antimicrobial with the highest percentage (70,9%) of resistant strains (70,6% from CF and 76,4% from NCF). The sul1 gene was detected in one sample from NCF patient with high MIC for TMP-SXT (32µg/mL). The qnr genes (A, B and S) were not identified in this study. Most strains of S. maltophilia was isolated from patients NCF. The TMP-SXT is still the best drug of choice for the treatment of infections caused by this species. However, continuous monitoring of resistance to important antibiotics and the use of molecular methods are warranted to provide appropriate antimicrobial regimens for treating S. maltophilia infections.
publishDate 2016
dc.date.available.fl_str_mv 2016-11-04
dc.date.issued.fl_str_mv 2016-03-11
dc.date.accessioned.fl_str_mv 2021-01-07T15:16:50Z
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dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv BRAGA, Fabrina Seger. Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos. 2016. 88 f. Dissertação (Mestrado em Microbiologia Médica Humana) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2016.
dc.identifier.uri.fl_str_mv http://www.bdtd.uerj.br/handle/1/14447
identifier_str_mv BRAGA, Fabrina Seger. Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos. 2016. 88 f. Dissertação (Mestrado em Microbiologia Médica Humana) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2016.
url http://www.bdtd.uerj.br/handle/1/14447
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dc.publisher.country.fl_str_mv BR
dc.publisher.department.fl_str_mv Centro Biomédico::Faculdade de Ciências Médicas
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