Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA

Detalhes bibliográficos
Ano de defesa: 2006
Autor(a) principal: Paula, Francine Santos de
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Alagoas
Brasil
Programa de Pós-Graduação em Química e Biotecnologia
UFAL
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: http://www.repositorio.ufal.br/handle/riufal/2555
Resumo: Electrochemical methods are very useful in Medicinal Chemistry and play important roles in the elucidation of the mechanism of biological action and also on the establishment of structure-electrochemical activity relationship. In the present work, we performed studies in the correlation of structure-redox potential and applied DNA biosensor in the investigation of the interaction of different substances towards DNA. Arylazoxy compounds were studied by cyclic voltammetry, in protic (aqueous / ethanolic phosphate buffer, pH 6.9) and aprotic (DMF + TBAP 0.1 mol L-1) media. In both media, linear relationships between EpIc (potential of first cathodic wave), Eredox (for aprotic) and Hammett substituent constants (σp, σ -) were observed. The reduction potentials correlate considerably better with (σp, σ -), showing the strong influence of resonance factors in the mechanism of reduction. The effect of pH on the reduction of calvatic acid and similar 2, a nonsubstituted compound, in aqueous ethanolic solution (20% v:v), was studied through differential pulse voltammetry. The Ep and Ip vs. pH plots showed distinct regions. The apparent pKa values of 3.3 and 7.9 for calvatic acid and 6.21 for the unsubstituted one were obtained and were similar to the reported ones. A double-stranded calf thymus DNA-Glassy Carbon (dsDNA-GC) biosensor was used as a model to study the possible DNA-damaging abilities of calvatic acid, berenil and mechlorethamine towards dsDNA, in situ at a charged interface. Concerning this dsDNA-GC biosensor, two ways were used for performing the experiments – one with the analytes in solution and the other with them incubated into the dsDNA gel, immobilized directly on the electrode. Calvatic acid does not damage dsDNA. Any diagnostic peak related to the oxidation of bases was observed. It concentrates in the dsDNA matrix. The DNA damaging abilities of berenil were shown. DPV-detectable DNA damage, with berenil incubated into the dsDNA gel, could be observed at concentrations of 1 as low as 1 x 10-5 mol dm-3. When berenil was applied to the dsDNA-GC biosensor in buffer solution, the method was much less sensitive and DPV-detectable DNA damage could be detected only at concentrations of 1 of 1 x 10-3 mol dm-3. This interaction was shown to be time dependent and the process was slow. ssDNA in solution, on a glassy carbon electrode was used for the analysis of the interaction of berenil, with evidence of selective interaction with adenine. Electrochemical voltammetric in situ sensing of dsDNA damage caused by mechlorethamine, incubated into the dsDNA gel, after 24 hours contact, was possible by the appearance, in the differential pulse voltammograms, of the diagnostic peaks of the nucleobases guanine and adenine oxidation that indicate interaction and damage to DNA. The effect of concentration of mechlorethamine and its time of exposition in solution, in the presence of dsDNA-GC are also reported. With three hours of exposition, the guanine oxidation peak is already visible and concentration of mechlorethamine in the order of 10-5 mol L-1 leads to clearly discernible diagnostic signals. From a qualitative viewpoint, preparation of the biosensor and incorporation of dsDNA gel and substrate with a contact time of 24 h would be the method of choice for the observation of interactions between berenil and DNA, and detection of consequential oxidative damage. As the dsDNA biosensor is easily prepared and gives results for DNA damage in a reasonable time, they could be used as an analytical device to investigate potential new drugs targeting DNA.
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spelling Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNABioelectrochemical study of electro-bioactive compounds - structure-electroactivity relation and use of DNA biosensor in the study of intercalating agents and DNA alkylating agentsMétodos eletroquímicosQuímica medicinalEletroquímicaBiossensor de DNAElectrochemical methodsMedical chemistryElectrochemistryDNA biosensorsCNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA::FISICO-QUIMICA::ELETROQUIMICAElectrochemical methods are very useful in Medicinal Chemistry and play important roles in the elucidation of the mechanism of biological action and also on the establishment of structure-electrochemical activity relationship. In the present work, we performed studies in the correlation of structure-redox potential and applied DNA biosensor in the investigation of the interaction of different substances towards DNA. Arylazoxy compounds were studied by cyclic voltammetry, in protic (aqueous / ethanolic phosphate buffer, pH 6.9) and aprotic (DMF + TBAP 0.1 mol L-1) media. In both media, linear relationships between EpIc (potential of first cathodic wave), Eredox (for aprotic) and Hammett substituent constants (σp, σ -) were observed. The reduction potentials correlate considerably better with (σp, σ -), showing the strong influence of resonance factors in the mechanism of reduction. The effect of pH on the reduction of calvatic acid and similar 2, a nonsubstituted compound, in aqueous ethanolic solution (20% v:v), was studied through differential pulse voltammetry. The Ep and Ip vs. pH plots showed distinct regions. The apparent pKa values of 3.3 and 7.9 for calvatic acid and 6.21 for the unsubstituted one were obtained and were similar to the reported ones. A double-stranded calf thymus DNA-Glassy Carbon (dsDNA-GC) biosensor was used as a model to study the possible DNA-damaging abilities of calvatic acid, berenil and mechlorethamine towards dsDNA, in situ at a charged interface. Concerning this dsDNA-GC biosensor, two ways were used for performing the experiments – one with the analytes in solution and the other with them incubated into the dsDNA gel, immobilized directly on the electrode. Calvatic acid does not damage dsDNA. Any diagnostic peak related to the oxidation of bases was observed. It concentrates in the dsDNA matrix. The DNA damaging abilities of berenil were shown. DPV-detectable DNA damage, with berenil incubated into the dsDNA gel, could be observed at concentrations of 1 as low as 1 x 10-5 mol dm-3. When berenil was applied to the dsDNA-GC biosensor in buffer solution, the method was much less sensitive and DPV-detectable DNA damage could be detected only at concentrations of 1 of 1 x 10-3 mol dm-3. This interaction was shown to be time dependent and the process was slow. ssDNA in solution, on a glassy carbon electrode was used for the analysis of the interaction of berenil, with evidence of selective interaction with adenine. Electrochemical voltammetric in situ sensing of dsDNA damage caused by mechlorethamine, incubated into the dsDNA gel, after 24 hours contact, was possible by the appearance, in the differential pulse voltammograms, of the diagnostic peaks of the nucleobases guanine and adenine oxidation that indicate interaction and damage to DNA. The effect of concentration of mechlorethamine and its time of exposition in solution, in the presence of dsDNA-GC are also reported. With three hours of exposition, the guanine oxidation peak is already visible and concentration of mechlorethamine in the order of 10-5 mol L-1 leads to clearly discernible diagnostic signals. From a qualitative viewpoint, preparation of the biosensor and incorporation of dsDNA gel and substrate with a contact time of 24 h would be the method of choice for the observation of interactions between berenil and DNA, and detection of consequential oxidative damage. As the dsDNA biosensor is easily prepared and gives results for DNA damage in a reasonable time, they could be used as an analytical device to investigate potential new drugs targeting DNA.Métodos eletroquímicos são úteis em Química Medicinal e auxiliam no esclarecimento de mecanismos de ação biológica e desempenham importante papel no estudo das relações estrutura-atividade, uma vez que os efeitos dos substituintes podem ser diretamente relacionados aos parâmetros eletroquímicos. No presente trabalho, estudos de correlação estrutura-potencial redox foram realizados, com aplicação de biossensor de DNA na investigação de interação de substâncias de diferentes classes estruturais em relação ao DNA. Compostos arilazoxilados foram estudados por voltametria cíclica, em meio prótico (aquoso/etanólico, tampão fosfato, pH 6,9) e aprótico (DMF + TBAP 0,1 mol L-1). Em ambos os meios, relações lineares entre EpIc (potencial da primeira onda catódica) e as constantes de substituinte σp(σ -) foram observadas. Os potenciais de redução correlacionam muito melhor com as constantes de substituinte σp(σ -), mostrando a forte influência dos fatores de ressonância no mecanismo de redução. O estudo eletroquímico da redução do ácido calvático e análogo não substituído, em meio aquoso-etanólico (20% v/v), utilizando voltametria de pulso diferencial, permitiu a obtenção de gráficos de Ep vs. pH e Ip vs. pH, com estabelecimento de valores de pKa aparente para o ácido calvático (pKa1 = 3,3 e pKa2 = 7,9) e seu análogo (pKa = 6,21). O estudo eletroquímico do ácido calvático, do berenil e da mecloretamina, em biossensor de dsDNA-CV, tanto em solução como incorporado na matriz do dsDNA, foi realizado. O ácido calvático não causa dano à molécula de DNA, pois não apareceram os picos diagnósticos de oxidação das respectivas bases, o que sugere que sua ação biológica não deve envolver o DNA como alvo. Foi possível observar o dano causado pelo berenil incorporado no gel de dsDNA, devido ao aparecimento de picos diagnósticos da oxidação da guanina, o que indica interação e dano à molécula de DNA, a partir de concentrações da ordem de 10-5 mol L-1. Com o berenil em solução, o método se mostrou menos sensível. O dano causado pelo berenil ao DNA foi também dependente do tempo de exposição e um tempo mínimo de contato de 05 horas foi necessário. Estudos em presença de ssDNA, em carbono vítreo, permitiram evidenciar interação efetiva com a adenina, no caso do berenil. No caso da mecloretamina, foi possível detectar a interação desse agente alquilante com DNA através da observação de picos diagnósticos relacionados à oxidação das nucleobases. Os resultados permitiram definir as melhores condições experimentais, as quais são: a adição do analito diretamente no gel de dsDNA, em concentração c > 10-5 mol L-1 e deixado para secar por 24 horas. Como o biossensor de dsDNA é facilmente preparado e fornece informações de dano ao dsDNA, em tempo razoável, ele pode ser usado como um dispositivo útil na análise de fármacos ou protótipos cujo alvo seja a molécula de DNA.Universidade Federal de AlagoasBrasilPrograma de Pós-Graduação em Química e BiotecnologiaUFALGoulart, Marília Oliveira Fonsecahttp://lattes.cnpq.br/5271094336884473Galdino , Fabiane Caxico de Abreuhttp://lattes.cnpq.br/4203326795155880Kubota, Lauro Tatsuohttp://lattes.cnpq.br/7572366766177648Ribeiro, Adriana Santoshttp://lattes.cnpq.br/2753110936126480Meneghetti, Mario Robertohttp://lattes.cnpq.br/6642503680426310Simone, Carlos Alberto dehttp://lattes.cnpq.br/0738504713908524Araújo Júnior, João Xavier dehttp://lattes.cnpq.br/5717734170464420Paula, Francine Santos de2018-02-28T19:04:20Z2018-02-272018-02-28T19:04:20Z2006-08-25info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfPAULA, Francine Santos de. Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA. 2006. 132 f. Tese (Doutorado em Química e Biotecnologia) - Instituto de Química e Biotecnologia, Programa de Pós-Graduação em Química e Biotecnologia, Universidade Federal de Alagoas, Maceió, 2006.http://www.repositorio.ufal.br/handle/riufal/2555porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da Universidade Federal de Alagoas (UFAL)instname:Universidade Federal de Alagoas (UFAL)instacron:UFAL2018-09-19T17:29:48Zoai:www.repositorio.ufal.br:riufal/2555Repositório InstitucionalPUBhttp://www.repositorio.ufal.br/oai/requestri@sibi.ufal.bropendoar:46482018-09-19T17:29:48Repositório Institucional da Universidade Federal de Alagoas (UFAL) - Universidade Federal de Alagoas (UFAL)false
dc.title.none.fl_str_mv Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA
Bioelectrochemical study of electro-bioactive compounds - structure-electroactivity relation and use of DNA biosensor in the study of intercalating agents and DNA alkylating agents
title Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA
spellingShingle Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA
Paula, Francine Santos de
Métodos eletroquímicos
Química medicinal
Eletroquímica
Biossensor de DNA
Electrochemical methods
Medical chemistry
Electrochemistry
DNA biosensors
CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA::FISICO-QUIMICA::ELETROQUIMICA
title_short Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA
title_full Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA
title_fullStr Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA
title_full_unstemmed Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA
title_sort Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA
author Paula, Francine Santos de
author_facet Paula, Francine Santos de
author_role author
dc.contributor.none.fl_str_mv Goulart, Marília Oliveira Fonseca
http://lattes.cnpq.br/5271094336884473
Galdino , Fabiane Caxico de Abreu
http://lattes.cnpq.br/4203326795155880
Kubota, Lauro Tatsuo
http://lattes.cnpq.br/7572366766177648
Ribeiro, Adriana Santos
http://lattes.cnpq.br/2753110936126480
Meneghetti, Mario Roberto
http://lattes.cnpq.br/6642503680426310
Simone, Carlos Alberto de
http://lattes.cnpq.br/0738504713908524
Araújo Júnior, João Xavier de
http://lattes.cnpq.br/5717734170464420
dc.contributor.author.fl_str_mv Paula, Francine Santos de
dc.subject.por.fl_str_mv Métodos eletroquímicos
Química medicinal
Eletroquímica
Biossensor de DNA
Electrochemical methods
Medical chemistry
Electrochemistry
DNA biosensors
CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA::FISICO-QUIMICA::ELETROQUIMICA
topic Métodos eletroquímicos
Química medicinal
Eletroquímica
Biossensor de DNA
Electrochemical methods
Medical chemistry
Electrochemistry
DNA biosensors
CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA::FISICO-QUIMICA::ELETROQUIMICA
description Electrochemical methods are very useful in Medicinal Chemistry and play important roles in the elucidation of the mechanism of biological action and also on the establishment of structure-electrochemical activity relationship. In the present work, we performed studies in the correlation of structure-redox potential and applied DNA biosensor in the investigation of the interaction of different substances towards DNA. Arylazoxy compounds were studied by cyclic voltammetry, in protic (aqueous / ethanolic phosphate buffer, pH 6.9) and aprotic (DMF + TBAP 0.1 mol L-1) media. In both media, linear relationships between EpIc (potential of first cathodic wave), Eredox (for aprotic) and Hammett substituent constants (σp, σ -) were observed. The reduction potentials correlate considerably better with (σp, σ -), showing the strong influence of resonance factors in the mechanism of reduction. The effect of pH on the reduction of calvatic acid and similar 2, a nonsubstituted compound, in aqueous ethanolic solution (20% v:v), was studied through differential pulse voltammetry. The Ep and Ip vs. pH plots showed distinct regions. The apparent pKa values of 3.3 and 7.9 for calvatic acid and 6.21 for the unsubstituted one were obtained and were similar to the reported ones. A double-stranded calf thymus DNA-Glassy Carbon (dsDNA-GC) biosensor was used as a model to study the possible DNA-damaging abilities of calvatic acid, berenil and mechlorethamine towards dsDNA, in situ at a charged interface. Concerning this dsDNA-GC biosensor, two ways were used for performing the experiments – one with the analytes in solution and the other with them incubated into the dsDNA gel, immobilized directly on the electrode. Calvatic acid does not damage dsDNA. Any diagnostic peak related to the oxidation of bases was observed. It concentrates in the dsDNA matrix. The DNA damaging abilities of berenil were shown. DPV-detectable DNA damage, with berenil incubated into the dsDNA gel, could be observed at concentrations of 1 as low as 1 x 10-5 mol dm-3. When berenil was applied to the dsDNA-GC biosensor in buffer solution, the method was much less sensitive and DPV-detectable DNA damage could be detected only at concentrations of 1 of 1 x 10-3 mol dm-3. This interaction was shown to be time dependent and the process was slow. ssDNA in solution, on a glassy carbon electrode was used for the analysis of the interaction of berenil, with evidence of selective interaction with adenine. Electrochemical voltammetric in situ sensing of dsDNA damage caused by mechlorethamine, incubated into the dsDNA gel, after 24 hours contact, was possible by the appearance, in the differential pulse voltammograms, of the diagnostic peaks of the nucleobases guanine and adenine oxidation that indicate interaction and damage to DNA. The effect of concentration of mechlorethamine and its time of exposition in solution, in the presence of dsDNA-GC are also reported. With three hours of exposition, the guanine oxidation peak is already visible and concentration of mechlorethamine in the order of 10-5 mol L-1 leads to clearly discernible diagnostic signals. From a qualitative viewpoint, preparation of the biosensor and incorporation of dsDNA gel and substrate with a contact time of 24 h would be the method of choice for the observation of interactions between berenil and DNA, and detection of consequential oxidative damage. As the dsDNA biosensor is easily prepared and gives results for DNA damage in a reasonable time, they could be used as an analytical device to investigate potential new drugs targeting DNA.
publishDate 2006
dc.date.none.fl_str_mv 2006-08-25
2018-02-28T19:04:20Z
2018-02-27
2018-02-28T19:04:20Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv PAULA, Francine Santos de. Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA. 2006. 132 f. Tese (Doutorado em Química e Biotecnologia) - Instituto de Química e Biotecnologia, Programa de Pós-Graduação em Química e Biotecnologia, Universidade Federal de Alagoas, Maceió, 2006.
http://www.repositorio.ufal.br/handle/riufal/2555
identifier_str_mv PAULA, Francine Santos de. Estudo bioeletroquímico de compostos eletrobioativos - relação estrutura-eletroatividade e utilização de biossensor de DNA no estudo de agentes intercalantes e alquilantes de DNA. 2006. 132 f. Tese (Doutorado em Química e Biotecnologia) - Instituto de Química e Biotecnologia, Programa de Pós-Graduação em Química e Biotecnologia, Universidade Federal de Alagoas, Maceió, 2006.
url http://www.repositorio.ufal.br/handle/riufal/2555
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Alagoas
Brasil
Programa de Pós-Graduação em Química e Biotecnologia
UFAL
publisher.none.fl_str_mv Universidade Federal de Alagoas
Brasil
Programa de Pós-Graduação em Química e Biotecnologia
UFAL
dc.source.none.fl_str_mv reponame:Repositório Institucional da Universidade Federal de Alagoas (UFAL)
instname:Universidade Federal de Alagoas (UFAL)
instacron:UFAL
instname_str Universidade Federal de Alagoas (UFAL)
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institution UFAL
reponame_str Repositório Institucional da Universidade Federal de Alagoas (UFAL)
collection Repositório Institucional da Universidade Federal de Alagoas (UFAL)
repository.name.fl_str_mv Repositório Institucional da Universidade Federal de Alagoas (UFAL) - Universidade Federal de Alagoas (UFAL)
repository.mail.fl_str_mv ri@sibi.ufal.br
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