Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase

Detalhes bibliográficos
Ano de defesa: 2024
Autor(a) principal: Albuquerque, Andressa Almeida
Orientador(a): Nagao-Dias, Aparecida Tiemi
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Não Informado pela instituição
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Área do conhecimento CNPq:
Link de acesso: http://repositorio.ufc.br/handle/riufc/80480
Resumo: Leprosy is a chronic infectious disease caused by the bacillus Mycobacterium leprae. As it is a pathology that presents a long time for incubation, children diagnosed with leprosy indicate active transmission in the community. Leprosy skin lesions, which can be easily confounded with other diseases, and the subjectivity of dermatoneurological evaluation, reveal the need for laboratory tests that could assist in the diagnosis, making it less subjective and, thus, minimizing risks and challenges related to late diagnosis. The objective of the present study was to establish methods for detecting M. leprae DNA by molecular biology to identify groups at risk for the development of leprosy contacts under 15 years of age and its association with results of dermatoneurological evaluation and with positivity of serum antibodies to the phenolic glycolipid antigen 1 (PGL1), specific to M. leprae. Two types of real-time PCR (qPCR) techniques were validated for detecting M. leprae DNA in blood samples, that is, Sybr green and Taqman®. The commercial NATHANS-Leprosy kit, recently approved for use with skin biopsy samples, was also used to analyze DNA samples extracted from whole blood. 56 index cases and 317 contacts under the age of 15 living in Santana do Ipanema (AL), São Gonçalo do Amarante (CE) and Canindé (CE) were selected. After dermatoneurological evaluation, whole blood samples were collected for detection of M. leprae DNA by qPCR and serum for anti-PGL1 measurement by indirect ELISA. The targets chosen for qPCR were the 16SrRNA and RLEP genes. An RLEP genetic sequence designed from the Primer Express 3.0 Program was also used. The tests for RLEP and 16S rRNA showed analytical sensitivities of 1.57 fg/µL and 97.66 fg/µL. While the tests for RLEP showed analytical specificity to M. leprae DNA, 16S rRNA also showed amplification to DNA from other mycobacteria. Nonetheless, 16S rRNA in Taqman® tests presented specificity to M. leprae DNA. All tests performed as expected for PCR amplification curves. When they were applied to DNA samples extracted from contacts and cases, there was no correlation between serology and molecular tests. Among the molecular tests, the NATHANS-Leprosy kit shows a slight correlation with the Taqman® and Sybr Green tests. In conclusion, in the present work it was possible to establish two molecular methods for Mycobacterium leprae DNA that proved to be sensitive, specific and reproducible using two RLEP sequences and one 16S rRNA sequence. However, they cannot yet be considered validated for use with whole blood samples, as the current study showed a complete discrepancy among the methods.
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spelling Albuquerque, Andressa AlmeidaBindá, Alexandre HavtNagao-Dias, Aparecida Tiemi2025-04-15T14:24:26Z2025-04-15T14:24:26Z2024ALBUQUERQUE, Andressa Almeida. Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase. 2025. 116 f. Tese (Doutorado em Biotecnologia) - Universidade Federal do Ceará, Fortaleza, 2024.http://repositorio.ufc.br/handle/riufc/80480Leprosy is a chronic infectious disease caused by the bacillus Mycobacterium leprae. As it is a pathology that presents a long time for incubation, children diagnosed with leprosy indicate active transmission in the community. Leprosy skin lesions, which can be easily confounded with other diseases, and the subjectivity of dermatoneurological evaluation, reveal the need for laboratory tests that could assist in the diagnosis, making it less subjective and, thus, minimizing risks and challenges related to late diagnosis. The objective of the present study was to establish methods for detecting M. leprae DNA by molecular biology to identify groups at risk for the development of leprosy contacts under 15 years of age and its association with results of dermatoneurological evaluation and with positivity of serum antibodies to the phenolic glycolipid antigen 1 (PGL1), specific to M. leprae. Two types of real-time PCR (qPCR) techniques were validated for detecting M. leprae DNA in blood samples, that is, Sybr green and Taqman®. The commercial NATHANS-Leprosy kit, recently approved for use with skin biopsy samples, was also used to analyze DNA samples extracted from whole blood. 56 index cases and 317 contacts under the age of 15 living in Santana do Ipanema (AL), São Gonçalo do Amarante (CE) and Canindé (CE) were selected. After dermatoneurological evaluation, whole blood samples were collected for detection of M. leprae DNA by qPCR and serum for anti-PGL1 measurement by indirect ELISA. The targets chosen for qPCR were the 16SrRNA and RLEP genes. An RLEP genetic sequence designed from the Primer Express 3.0 Program was also used. The tests for RLEP and 16S rRNA showed analytical sensitivities of 1.57 fg/µL and 97.66 fg/µL. While the tests for RLEP showed analytical specificity to M. leprae DNA, 16S rRNA also showed amplification to DNA from other mycobacteria. Nonetheless, 16S rRNA in Taqman® tests presented specificity to M. leprae DNA. All tests performed as expected for PCR amplification curves. When they were applied to DNA samples extracted from contacts and cases, there was no correlation between serology and molecular tests. Among the molecular tests, the NATHANS-Leprosy kit shows a slight correlation with the Taqman® and Sybr Green tests. In conclusion, in the present work it was possible to establish two molecular methods for Mycobacterium leprae DNA that proved to be sensitive, specific and reproducible using two RLEP sequences and one 16S rRNA sequence. However, they cannot yet be considered validated for use with whole blood samples, as the current study showed a complete discrepancy among the methods.A hanseníase é uma doença infecciosa crônica causada pelo bacilo Mycobacterium leprae. Por se tratar de uma patologia que possui elevado tempo de incubação, crianças com diagnóstico de hanseníase são um indicativo de transmissão ativa na comunidade. A associação das características das lesões pele da hanseníase, as quais podem ser facilmente confundidas com outras doenças, com a subjetividade da avaliação dermatoneurológica, revela a necessidade de testes laboratoriais que auxiliem no diagnóstico, tornando-o menos subjetivo e, assim, minimizando os riscos e desafios relacionados ao diagnóstico tardio. O objetivo do presente estudo é estabelecer métodos de detecção de M. leprae por biologia molecular para identificação de grupos de risco para o desenvolvimento de hanseníase em contatos menores de 15 anos de pacientes com hanseníase e sua associação com resultados de avaliação dermatoneurológica e com positividade de anticorpos séricos para o antígeno glicolipídeo fenólico 1 (PGL1), específico de M. leprae. Foram validados dois tipos de técnicas de PCR em tempo real (qPCR) para detecção de DNA de M. leprae em amostras de sangue: Sybr Green e Taqman®. O kit comercial NATHANSeníase, recém aprovado para uso com amostras de biópsias de pele, foi também empregado para análise de amostras de DNA extraído de de sangue total. Foram selecionados 56 casos-índice e 317 contatos menores de 15 anos residentes em Santana do Ipanema (AL), São Gonçalo do Amarante (CE) e Canindé (CE). Após avaliação dermatoneurológica, foram coletadas amostras de sangue total para detecção de DNA de M. leprae por qPCR e soro para dosagem de anti-PGL1 por ELISA indireto. Os alvos escolhidos para a qPCR foram os genes 16SrRNA e RLEP. Foi também empregada uma sequência genética de RLEP desenhada a partir do Programa Primer Express 3.0. Os testes para RLEP e 16S rRNA apresentaram sensibilidades analíticas de 1,57 fg/mL e 97,66 fg/mL. Enquanto os testes de RLEP mostraram especificidade analítica para DNA de M. leprae, 16S rRNA mostrou amplificação para DNA de outras micobactérias. Todos os testes apresentaram bom desempenho, conforme esperado, para curvas de amplificação de PCR. Quando foram aplicados nas amostras de DNA extraídas de contatos e casos, não houve correlação entre a sorologia e os testes moleculares. Entre os testes moleculares, houve uma leve correlação entre o kit NATHANSeníase e os testes de Taqman® e Sybr Green. Como conclusão, no presente trabalho foi possível estabelecer dois métodos moleculares para DNA de Mycobacterium leprae que se mostraram sensíveis, específicos e reprodutíveis, utilizando duas sequências de RLEP e uma de16S rRNA. No entanto, ainda não podem ser considerados validados para uso com amostras de sangue total, pois o estudo atual mostrou total discrepância entre os métodos.Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníaseDevelopment of molecular methods for detection of Mycobacterium leprae as a diagnostic tool for leprosyinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisHanseníasePCR em tempo realAnti-PGL1LeprosyReal time PCRAnti-PGL1CNPQ::CIENCIAS BIOLOGICASinfo:eu-repo/semantics/openAccessporreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFChttp://lattes.cnpq.br/0232309100029919http://lattes.cnpq.br/14400137103455082025-04-15LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://repositorio.ufc.br/bitstream/riufc/80480/4/license.txt8a4605be74aa9ea9d79846c1fba20a33MD54ORIGINAL2024_tese_aaalbuquerque.pdf2024_tese_aaalbuquerque.pdfapplication/pdf3220128http://repositorio.ufc.br/bitstream/riufc/80480/5/2024_tese_aaalbuquerque.pdf4d48febea130f8730c26641a794d92eaMD55riufc/804802025-04-15 11:25:23.386oai:repositorio.ufc.br:riufc/80480Tk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo=Repositório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2025-04-15T14:25:23Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false
dc.title.pt_BR.fl_str_mv Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase
dc.title.en.pt_BR.fl_str_mv Development of molecular methods for detection of Mycobacterium leprae as a diagnostic tool for leprosy
title Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase
spellingShingle Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase
Albuquerque, Andressa Almeida
CNPQ::CIENCIAS BIOLOGICAS
Hanseníase
PCR em tempo real
Anti-PGL1
Leprosy
Real time PCR
Anti-PGL1
title_short Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase
title_full Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase
title_fullStr Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase
title_full_unstemmed Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase
title_sort Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase
author Albuquerque, Andressa Almeida
author_facet Albuquerque, Andressa Almeida
author_role author
dc.contributor.co-advisor.none.fl_str_mv Bindá, Alexandre Havt
dc.contributor.author.fl_str_mv Albuquerque, Andressa Almeida
dc.contributor.advisor1.fl_str_mv Nagao-Dias, Aparecida Tiemi
contributor_str_mv Nagao-Dias, Aparecida Tiemi
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS
topic CNPQ::CIENCIAS BIOLOGICAS
Hanseníase
PCR em tempo real
Anti-PGL1
Leprosy
Real time PCR
Anti-PGL1
dc.subject.ptbr.pt_BR.fl_str_mv Hanseníase
PCR em tempo real
Anti-PGL1
dc.subject.en.pt_BR.fl_str_mv Leprosy
Real time PCR
Anti-PGL1
description Leprosy is a chronic infectious disease caused by the bacillus Mycobacterium leprae. As it is a pathology that presents a long time for incubation, children diagnosed with leprosy indicate active transmission in the community. Leprosy skin lesions, which can be easily confounded with other diseases, and the subjectivity of dermatoneurological evaluation, reveal the need for laboratory tests that could assist in the diagnosis, making it less subjective and, thus, minimizing risks and challenges related to late diagnosis. The objective of the present study was to establish methods for detecting M. leprae DNA by molecular biology to identify groups at risk for the development of leprosy contacts under 15 years of age and its association with results of dermatoneurological evaluation and with positivity of serum antibodies to the phenolic glycolipid antigen 1 (PGL1), specific to M. leprae. Two types of real-time PCR (qPCR) techniques were validated for detecting M. leprae DNA in blood samples, that is, Sybr green and Taqman®. The commercial NATHANS-Leprosy kit, recently approved for use with skin biopsy samples, was also used to analyze DNA samples extracted from whole blood. 56 index cases and 317 contacts under the age of 15 living in Santana do Ipanema (AL), São Gonçalo do Amarante (CE) and Canindé (CE) were selected. After dermatoneurological evaluation, whole blood samples were collected for detection of M. leprae DNA by qPCR and serum for anti-PGL1 measurement by indirect ELISA. The targets chosen for qPCR were the 16SrRNA and RLEP genes. An RLEP genetic sequence designed from the Primer Express 3.0 Program was also used. The tests for RLEP and 16S rRNA showed analytical sensitivities of 1.57 fg/µL and 97.66 fg/µL. While the tests for RLEP showed analytical specificity to M. leprae DNA, 16S rRNA also showed amplification to DNA from other mycobacteria. Nonetheless, 16S rRNA in Taqman® tests presented specificity to M. leprae DNA. All tests performed as expected for PCR amplification curves. When they were applied to DNA samples extracted from contacts and cases, there was no correlation between serology and molecular tests. Among the molecular tests, the NATHANS-Leprosy kit shows a slight correlation with the Taqman® and Sybr Green tests. In conclusion, in the present work it was possible to establish two molecular methods for Mycobacterium leprae DNA that proved to be sensitive, specific and reproducible using two RLEP sequences and one 16S rRNA sequence. However, they cannot yet be considered validated for use with whole blood samples, as the current study showed a complete discrepancy among the methods.
publishDate 2024
dc.date.issued.fl_str_mv 2024
dc.date.accessioned.fl_str_mv 2025-04-15T14:24:26Z
dc.date.available.fl_str_mv 2025-04-15T14:24:26Z
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dc.identifier.citation.fl_str_mv ALBUQUERQUE, Andressa Almeida. Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase. 2025. 116 f. Tese (Doutorado em Biotecnologia) - Universidade Federal do Ceará, Fortaleza, 2024.
dc.identifier.uri.fl_str_mv http://repositorio.ufc.br/handle/riufc/80480
identifier_str_mv ALBUQUERQUE, Andressa Almeida. Estabelecimento de métodos moleculares para detecção de Mycobacterium leprae como ferramenta de diagnóstico para hanseníase. 2025. 116 f. Tese (Doutorado em Biotecnologia) - Universidade Federal do Ceará, Fortaleza, 2024.
url http://repositorio.ufc.br/handle/riufc/80480
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