Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento

Detalhes bibliográficos
Ano de defesa: 2018
Autor(a) principal: Andrade, Moab Torres de
Orientador(a): Campos, Francisco de Assis de Paiva
Banca de defesa: Não Informado pela instituição
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Não Informado pela instituição
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: http://www.repositorio.ufc.br/handle/riufc/37018
Resumo: The pericarp of açaí (Euterpe oleracea Mart.) has aroused great economic and scientific interest, especially by the presence of bioactive compounds. However, information regarding the genetics of the species, as well as metabolic and histological dynamics during pericarp development are scarce. Thus, the objective of this study was the histological and quantitative proteomic analysis of the developing pericarp of E. oleracea. To this purpose, fruits were collected and grouped in 12 stages of development (E0: floral bud - E11: ripe fruit), which were submitted to histological and histochemical analysis. Such analysis demonstrated noticeable structural changes in the pericarp, such as intense cell division responsible by formation of the layers of sclerenchyma and fundamental parenchyma in the mesocarp, resulting in the stratification of the mature pericarp into four layers. In the pericarp were observed the presence of raphides, deposition in the advanced stages of lipids and subepidermal accumulation of anthocyanins. Considering these data, four stages (E3, E6, E9 and E11) were selected for proteomic analysis, with protein extraction by Tris/Phenol method, trypsin digestion (shotgun approach), isobaric labeling of peptides with the reagent iTRAQ® 4-plex, pre-fractionation of labeled peptides in HPLC equipped with HILIC column and high-performance mass spectrometer (Q-Exactive Plus) analysis. Data analysis resulted in 4286 identified proteins, of which 476 presented differential abundance between the stages (p<0.05), mostly involved in carbohydrate metabolism and secondary metabolism. It was observed that the processes of glycolysis and cellular respiration are stimulated in E3 and E11, corresponding to the moments of high cell division and ripening of the pericarp, respectively. The higher abundance at the beginning and end of the development of phenylpropanoid pathway proteins is related to the lignification, cellular expansion and accumulation of phenolic acids in the pericarp. The process of anthocyanin accumulation in the pericarp responds to the increase in abundance of the leucoanthocyanidin dioxygenase, anthocyanidin O-3-glycosyltransferase and UDP-glycosyltransferase proteins. The present work presents the main histological changes in the development of the pericarp and fills the gaps of proteomic data for E. oleracea, in order to contribute to future biotechnological improvements in this crop.
id UFC-7_3842a53bceaf2c8176702bafcf023cc5
oai_identifier_str oai:repositorio.ufc.br:riufc/37018
network_acronym_str UFC-7
network_name_str Repositório Institucional da Universidade Federal do Ceará (UFC)
repository_id_str
spelling Andrade, Moab Torres deNogueira, Fábio CésarCampos, Francisco de Assis de Paiva2018-11-07T19:24:27Z2018-11-07T19:24:27Z2018ANDRADE, Moab Torres de. Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento. 2018. 77 f. Dissertação (Mestrado em Fitotecnia)–Universidade Federal do Ceará, Fortaleza, 2018.http://www.repositorio.ufc.br/handle/riufc/37018The pericarp of açaí (Euterpe oleracea Mart.) has aroused great economic and scientific interest, especially by the presence of bioactive compounds. However, information regarding the genetics of the species, as well as metabolic and histological dynamics during pericarp development are scarce. Thus, the objective of this study was the histological and quantitative proteomic analysis of the developing pericarp of E. oleracea. To this purpose, fruits were collected and grouped in 12 stages of development (E0: floral bud - E11: ripe fruit), which were submitted to histological and histochemical analysis. Such analysis demonstrated noticeable structural changes in the pericarp, such as intense cell division responsible by formation of the layers of sclerenchyma and fundamental parenchyma in the mesocarp, resulting in the stratification of the mature pericarp into four layers. In the pericarp were observed the presence of raphides, deposition in the advanced stages of lipids and subepidermal accumulation of anthocyanins. Considering these data, four stages (E3, E6, E9 and E11) were selected for proteomic analysis, with protein extraction by Tris/Phenol method, trypsin digestion (shotgun approach), isobaric labeling of peptides with the reagent iTRAQ® 4-plex, pre-fractionation of labeled peptides in HPLC equipped with HILIC column and high-performance mass spectrometer (Q-Exactive Plus) analysis. Data analysis resulted in 4286 identified proteins, of which 476 presented differential abundance between the stages (p<0.05), mostly involved in carbohydrate metabolism and secondary metabolism. It was observed that the processes of glycolysis and cellular respiration are stimulated in E3 and E11, corresponding to the moments of high cell division and ripening of the pericarp, respectively. The higher abundance at the beginning and end of the development of phenylpropanoid pathway proteins is related to the lignification, cellular expansion and accumulation of phenolic acids in the pericarp. The process of anthocyanin accumulation in the pericarp responds to the increase in abundance of the leucoanthocyanidin dioxygenase, anthocyanidin O-3-glycosyltransferase and UDP-glycosyltransferase proteins. The present work presents the main histological changes in the development of the pericarp and fills the gaps of proteomic data for E. oleracea, in order to contribute to future biotechnological improvements in this crop.O pericarpo de açaí (Euterpe oleracea Mart.) tem despertado grande interesse econômico e cientifico, especialmente devido presença de compostos bioativos. Entretanto, informações genéticas da espécie, bem como sobre a dinâmica metabólica e histológica durante desenvolvimento do pericarpo são escassas. Assim, o objetivo desse estudo foi a análise histológica e proteômica quantitativa do pericarpo em desenvolvimento de E. oleracea. Para isso, frutos foram coletados e agrupados em 12 estádios de desenvolvimento (E0: botão floral – E11: fruto maduro), os quais foram submetidos a análise histológica e histoquímica. Essa análise revelou marcantes mudanças estruturais no pericarpo, como a intensa divisão celular responsável pela formação das camadas de esclerênquima e de parênquima fundamental no mesocarpo, resultando na estratificação do pericarpo maduro em quatro camadas. Foi observado no pericarpo a presença de ráfides, deposição nos estádios avançados de lipídeos e acúmulo subepidérmico de antocianinas. A partir desses resultados, foram selecionados quatro estádios (E3, E6, E9 e E11) para análise proteômica, que contou com extração de proteínas pelo método Tris/fenol, digestão com tripsina (abordagem shotgun), marcação isobárica dos peptídeos com o reagente iTRAQ® 4-plex, pre-fracionamento dos peptídeos marcados em HPLC equipado com coluna HILIC e análise em espectrômetro de massas de alta resolução e desempenho (Q-Exactive Plus). A análise dos dados resultou em 4286 proteínas identificadas, das quais 476 apresentaram abundância diferencial entre os estádios (p<0,05), envolvidas majoritariamente, no metabolismo de carboidratos e metabolismo secundário. Observou-se que os processos de glicólise e respiração celular são estimulados no E3 e E11, correspondente com os momentos de elevada divisão celular e o amadurecimento do pericarpo, respectivamente. A maior abundância, no início e final do desenvolvimento, de proteínas da via de fenilpropanóides se relaciona com a lignificação, expansão celular e acúmulo de ácidos fenólicos no pericarpo. O processo de acúmulo de antocianinas no pericarpo responde ao aumento da expressão das proteínas leucoantocianidina dioxigenase, antocianidina O-3-glicosiltransferase e UDP-glicosiltransferase. O presente trabalho apresenta as principais mudanças histológicas no desenvolvimento do pericarpo e preenche as lacunas de dados proteômicos para Euterpe oleracea, de maneira a contribuir para futuras melhorias biotecnológicas da cultura.Euterpe oleracea MartPericarpoProteomaDesenvolvimentoHistologiaProteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimentoQuantitative proteomics and histology of developing açaí pericarp (Euterpe oleracea Mart.)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisporreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFCinfo:eu-repo/semantics/openAccessORIGINAL2018_dis_mtandrade.pdf2018_dis_mtandrade.pdfapplication/pdf3191119http://repositorio.ufc.br/bitstream/riufc/37018/3/2018_dis_mtandrade.pdf221080439f762c265bb8bef3f55ef863MD53LICENSElicense.txtlicense.txttext/plain; charset=utf-81788http://repositorio.ufc.br/bitstream/riufc/37018/2/license.txt89db4352906ed83f2ba5c6aed577d589MD52riufc/370182018-12-28 13:47:18.233oai:repositorio.ufc.br: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ório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2018-12-28T16:47:18Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false
dc.title.pt_BR.fl_str_mv Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento
dc.title.en.pt_BR.fl_str_mv Quantitative proteomics and histology of developing açaí pericarp (Euterpe oleracea Mart.)
title Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento
spellingShingle Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento
Andrade, Moab Torres de
Euterpe oleracea Mart
Pericarpo
Proteoma
Desenvolvimento
Histologia
title_short Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento
title_full Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento
title_fullStr Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento
title_full_unstemmed Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento
title_sort Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento
author Andrade, Moab Torres de
author_facet Andrade, Moab Torres de
author_role author
dc.contributor.co-advisor.none.fl_str_mv Nogueira, Fábio César
dc.contributor.author.fl_str_mv Andrade, Moab Torres de
dc.contributor.advisor1.fl_str_mv Campos, Francisco de Assis de Paiva
contributor_str_mv Campos, Francisco de Assis de Paiva
dc.subject.por.fl_str_mv Euterpe oleracea Mart
Pericarpo
Proteoma
Desenvolvimento
Histologia
topic Euterpe oleracea Mart
Pericarpo
Proteoma
Desenvolvimento
Histologia
description The pericarp of açaí (Euterpe oleracea Mart.) has aroused great economic and scientific interest, especially by the presence of bioactive compounds. However, information regarding the genetics of the species, as well as metabolic and histological dynamics during pericarp development are scarce. Thus, the objective of this study was the histological and quantitative proteomic analysis of the developing pericarp of E. oleracea. To this purpose, fruits were collected and grouped in 12 stages of development (E0: floral bud - E11: ripe fruit), which were submitted to histological and histochemical analysis. Such analysis demonstrated noticeable structural changes in the pericarp, such as intense cell division responsible by formation of the layers of sclerenchyma and fundamental parenchyma in the mesocarp, resulting in the stratification of the mature pericarp into four layers. In the pericarp were observed the presence of raphides, deposition in the advanced stages of lipids and subepidermal accumulation of anthocyanins. Considering these data, four stages (E3, E6, E9 and E11) were selected for proteomic analysis, with protein extraction by Tris/Phenol method, trypsin digestion (shotgun approach), isobaric labeling of peptides with the reagent iTRAQ® 4-plex, pre-fractionation of labeled peptides in HPLC equipped with HILIC column and high-performance mass spectrometer (Q-Exactive Plus) analysis. Data analysis resulted in 4286 identified proteins, of which 476 presented differential abundance between the stages (p<0.05), mostly involved in carbohydrate metabolism and secondary metabolism. It was observed that the processes of glycolysis and cellular respiration are stimulated in E3 and E11, corresponding to the moments of high cell division and ripening of the pericarp, respectively. The higher abundance at the beginning and end of the development of phenylpropanoid pathway proteins is related to the lignification, cellular expansion and accumulation of phenolic acids in the pericarp. The process of anthocyanin accumulation in the pericarp responds to the increase in abundance of the leucoanthocyanidin dioxygenase, anthocyanidin O-3-glycosyltransferase and UDP-glycosyltransferase proteins. The present work presents the main histological changes in the development of the pericarp and fills the gaps of proteomic data for E. oleracea, in order to contribute to future biotechnological improvements in this crop.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-11-07T19:24:27Z
dc.date.available.fl_str_mv 2018-11-07T19:24:27Z
dc.date.issued.fl_str_mv 2018
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv ANDRADE, Moab Torres de. Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento. 2018. 77 f. Dissertação (Mestrado em Fitotecnia)–Universidade Federal do Ceará, Fortaleza, 2018.
dc.identifier.uri.fl_str_mv http://www.repositorio.ufc.br/handle/riufc/37018
identifier_str_mv ANDRADE, Moab Torres de. Proteômica quantitativa e histologia do pericarpo de açaí (Euterpe oleracea Mart.) em desenvolvimento. 2018. 77 f. Dissertação (Mestrado em Fitotecnia)–Universidade Federal do Ceará, Fortaleza, 2018.
url http://www.repositorio.ufc.br/handle/riufc/37018
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da Universidade Federal do Ceará (UFC)
instname:Universidade Federal do Ceará (UFC)
instacron:UFC
instname_str Universidade Federal do Ceará (UFC)
instacron_str UFC
institution UFC
reponame_str Repositório Institucional da Universidade Federal do Ceará (UFC)
collection Repositório Institucional da Universidade Federal do Ceará (UFC)
bitstream.url.fl_str_mv http://repositorio.ufc.br/bitstream/riufc/37018/3/2018_dis_mtandrade.pdf
http://repositorio.ufc.br/bitstream/riufc/37018/2/license.txt
bitstream.checksum.fl_str_mv 221080439f762c265bb8bef3f55ef863
89db4352906ed83f2ba5c6aed577d589
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
repository.name.fl_str_mv Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)
repository.mail.fl_str_mv bu@ufc.br || repositorio@ufc.br
_version_ 1847793233179967488