Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)

Detalhes bibliográficos
Ano de defesa: 2023
Autor(a) principal: Martins, Sandra Rebeca Oliveira
Orientador(a): Sousa, Oscarina Viana de
Banca de defesa: Não Informado pela instituição
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Não Informado pela instituição
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Link de acesso: http://repositorio.ufc.br/handle/riufc/76072
Resumo: The World Health Organization (WHO) considers the spread of resistance genes among bacteria to be one of the main and most serious global public health problems. The number of microorganisms in aquatic environments that carry genes directly linked to resistance to antimicrobials resulting from the pressure exerted by anthropogenic activities and actions is increasing. The occurrence of residues of antibiotic substances in the environment ends up favoring the selection of bacterial strains resistant to antibiotic agents and greater circulation of resistance genes in environmental matrices. In addition to the irresponsible use of antimicrobials, other anthropogenic stressors can contaminate soil and surface waters and contribute to resistance profiles of bacterial communities. Thus, the main objective of the research was to characterize the bacterial resistance phenotypes related to water and sediment along the Jaguaribe River basin, in Ceará, correlating with the anthropogenic activities present in its surroundings. Water and sediment were collected at six different points along the river. Dilutions of the samples were inoculated into conventional culture medium Standard Counting Agar (PCA) using the Pour Plate technique. Then, the colony-forming units were quantified, isolated, identified and subjected to antibiogram and plasmid cure tests. Eight antibiotics were tested: Tetracycline, Doxycycline, Sulfazotrim, Erythromycin, Azithromycin, Levofloxacin, Chloramphenicol and Ampicillin. Bacterial counts were expressed in colony forming units (CFU) and ranged from 7.88 x 106 to 1.67 x 107 CFU/ml for water samples and from 2.09 x 104 to 1.96 x 106 CFU /g for sediment samples. Among bacterial cultures, Gram-positive bacteria were more frequently isolated than Gram-negative bacteria. Of the total isolates, 82% were resistant to one or more antimicrobials and 18% were sensitive to all antibiotics tested. The most frequent resistance phenotypes among bacterial isolates were against the substances Ampicillin (54%), Doxycycline (34%) and Tetracycline (28%) and the largest number of isolates expressing resistance was detected in water samples. The genetic origin of resistance was, for the most part, potentially chromosomal. The percentages of antimicrobial resistance observed in the bacteriota of sections of the Jaguaribe River basin indicate the effect of selective pressure related to the activities in its surroundings.
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spelling Martins, Sandra Rebeca OliveiraCarvalho, Fátima Cristiane Teles deSousa, Oscarina Viana de2024-02-07T11:11:20Z2024-02-07T11:11:20Z2023MARTINS, Sandra Rebeca Oliveira. Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil). 2023. 71 f. Dissertação (Mestrado em Ciências Marinhas Tropicais) - Programa de Pós-Graduação em Ciências Marinhas Tropicais, Instituto de Ciências do Mar - LABOMAR - Universidade Federal do Ceará. Fortaleza, 2023.http://repositorio.ufc.br/handle/riufc/76072The World Health Organization (WHO) considers the spread of resistance genes among bacteria to be one of the main and most serious global public health problems. The number of microorganisms in aquatic environments that carry genes directly linked to resistance to antimicrobials resulting from the pressure exerted by anthropogenic activities and actions is increasing. The occurrence of residues of antibiotic substances in the environment ends up favoring the selection of bacterial strains resistant to antibiotic agents and greater circulation of resistance genes in environmental matrices. In addition to the irresponsible use of antimicrobials, other anthropogenic stressors can contaminate soil and surface waters and contribute to resistance profiles of bacterial communities. Thus, the main objective of the research was to characterize the bacterial resistance phenotypes related to water and sediment along the Jaguaribe River basin, in Ceará, correlating with the anthropogenic activities present in its surroundings. Water and sediment were collected at six different points along the river. Dilutions of the samples were inoculated into conventional culture medium Standard Counting Agar (PCA) using the Pour Plate technique. Then, the colony-forming units were quantified, isolated, identified and subjected to antibiogram and plasmid cure tests. Eight antibiotics were tested: Tetracycline, Doxycycline, Sulfazotrim, Erythromycin, Azithromycin, Levofloxacin, Chloramphenicol and Ampicillin. Bacterial counts were expressed in colony forming units (CFU) and ranged from 7.88 x 106 to 1.67 x 107 CFU/ml for water samples and from 2.09 x 104 to 1.96 x 106 CFU /g for sediment samples. Among bacterial cultures, Gram-positive bacteria were more frequently isolated than Gram-negative bacteria. Of the total isolates, 82% were resistant to one or more antimicrobials and 18% were sensitive to all antibiotics tested. The most frequent resistance phenotypes among bacterial isolates were against the substances Ampicillin (54%), Doxycycline (34%) and Tetracycline (28%) and the largest number of isolates expressing resistance was detected in water samples. The genetic origin of resistance was, for the most part, potentially chromosomal. The percentages of antimicrobial resistance observed in the bacteriota of sections of the Jaguaribe River basin indicate the effect of selective pressure related to the activities in its surroundings.A Organização Mundial da Saúde (OMS) considera a dispersão de genes de resistência entre bactérias como um dos principais e mais graves problemas de saúde pública global. É crescente o número de microrganismos nos ambientes aquáticos que carregam genes diretamente ligados à resistência a antimicrobianos resultantes da pressão exercida por atividades e ações antropogênicas. A ocorrência de resíduos de substâncias antibióticas no ambiente acaba por favorecer a seleção de linhagens bacterianas resistentes aos agentes antibióticos e maior circulação de genes de resistência nas matrizes ambientais. Além do uso não responsável de antimicrobianos, outros estressores antrópicos podem contaminar o solo e as águas superficiais e contribuir com perfis de resistência das comunidades bacterianas. Assim, o objetivo principal da pesquisa foi caracterizar os fenótipos de resistência bacteriana relacionados à água e sedimento ao longo da bacia do Rio Jaguaribe, no Ceará, correlacionando com as atividades antrópicas presentes em seu entorno. Foram realizadas coletas de água e de sedimento em seis pontos distintos ao longo do rio. Diluições das amostras foram inoculadas em meio de cultura convencional Ágar Padrão para Contagem (PCA) utilizando a técnica de Pour Plate. Em seguida, as unidades formadoras de colônias foram quantificadas, isoladas, identificadas e submetidas ao teste de antibiograma e cura de plasmídeo. Foram testados oito antibióticos: Tetraciclina, Doxiciclina, Sulfazotrim, Eritromicina, Azitromicina, Levofloxacina, Cloranfenicol e Ampicilina. A contagem de bactérias foi expressa em unidades formadoras de colônias (UFC) e variou de 7,88 x 106 a 1,67 x 107 UFC/ml para as amostras de água e de 2,09 x 104 a 1,96 x 106 UFC/g para as amostras de sedimento. Entre as culturas bacterianas, as bactérias Gram-positivas foram mais frequentemente isoladas do que as Gram-negativas. Do total de isolados, 82% apresentaram resistência a um ou mais antimicrobianos e 18% mostraram-se sensíveis a todos os antibióticos testados. Os fenótipos de resistência mais frequentes entre os isolados bacterianos foram frente às substâncias Ampicilina (54%), Doxiciclina (34%) e Tetraciclina (28%) e o maior número de isolados expressando resistência foi detectado nas amostras de água. A origem genética da resistência foi, em sua maioria, potencialmente cromossômica. Os percentuais de resistência antimicrobiana observados na bacteriota de trechos da bacia do Rio Jaguaribe indicam efeito da pressão seletiva relacionado às atividades do seu entorno.Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisResistomaAntimicrobianosComunidade bacterianaAmbiente aquáticoResistomeAntimicrobialsBacterial communityAquatic environmentinfo:eu-repo/semantics/openAccessporreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFChttp://lattes.cnpq.br/7122254345474983https://orcid.org/0000-0003-3907-7964http://lattes.cnpq.br/6529999796909142http://lattes.cnpq.br/81492076651545102024ORIGINAL2023_dis_sromartins.pdf2023_dis_sromartins.pdfapplication/pdf2393634http://repositorio.ufc.br/bitstream/riufc/76072/1/2023_dis_sromartins.pdfaff6fb1eb2765dc069180a75981f5cffMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://repositorio.ufc.br/bitstream/riufc/76072/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52riufc/760722024-02-07 08:11:45.503oai:repositorio.ufc.br:riufc/76072Tk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo=Repositório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2024-02-07T11:11:45Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false
dc.title.pt_BR.fl_str_mv Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)
title Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)
spellingShingle Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)
Martins, Sandra Rebeca Oliveira
Resistoma
Antimicrobianos
Comunidade bacteriana
Ambiente aquático
Resistome
Antimicrobials
Bacterial community
Aquatic environment
title_short Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)
title_full Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)
title_fullStr Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)
title_full_unstemmed Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)
title_sort Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil)
author Martins, Sandra Rebeca Oliveira
author_facet Martins, Sandra Rebeca Oliveira
author_role author
dc.contributor.co-advisor.none.fl_str_mv Carvalho, Fátima Cristiane Teles de
dc.contributor.author.fl_str_mv Martins, Sandra Rebeca Oliveira
dc.contributor.advisor1.fl_str_mv Sousa, Oscarina Viana de
contributor_str_mv Sousa, Oscarina Viana de
dc.subject.ptbr.pt_BR.fl_str_mv Resistoma
Antimicrobianos
Comunidade bacteriana
Ambiente aquático
topic Resistoma
Antimicrobianos
Comunidade bacteriana
Ambiente aquático
Resistome
Antimicrobials
Bacterial community
Aquatic environment
dc.subject.en.pt_BR.fl_str_mv Resistome
Antimicrobials
Bacterial community
Aquatic environment
description The World Health Organization (WHO) considers the spread of resistance genes among bacteria to be one of the main and most serious global public health problems. The number of microorganisms in aquatic environments that carry genes directly linked to resistance to antimicrobials resulting from the pressure exerted by anthropogenic activities and actions is increasing. The occurrence of residues of antibiotic substances in the environment ends up favoring the selection of bacterial strains resistant to antibiotic agents and greater circulation of resistance genes in environmental matrices. In addition to the irresponsible use of antimicrobials, other anthropogenic stressors can contaminate soil and surface waters and contribute to resistance profiles of bacterial communities. Thus, the main objective of the research was to characterize the bacterial resistance phenotypes related to water and sediment along the Jaguaribe River basin, in Ceará, correlating with the anthropogenic activities present in its surroundings. Water and sediment were collected at six different points along the river. Dilutions of the samples were inoculated into conventional culture medium Standard Counting Agar (PCA) using the Pour Plate technique. Then, the colony-forming units were quantified, isolated, identified and subjected to antibiogram and plasmid cure tests. Eight antibiotics were tested: Tetracycline, Doxycycline, Sulfazotrim, Erythromycin, Azithromycin, Levofloxacin, Chloramphenicol and Ampicillin. Bacterial counts were expressed in colony forming units (CFU) and ranged from 7.88 x 106 to 1.67 x 107 CFU/ml for water samples and from 2.09 x 104 to 1.96 x 106 CFU /g for sediment samples. Among bacterial cultures, Gram-positive bacteria were more frequently isolated than Gram-negative bacteria. Of the total isolates, 82% were resistant to one or more antimicrobials and 18% were sensitive to all antibiotics tested. The most frequent resistance phenotypes among bacterial isolates were against the substances Ampicillin (54%), Doxycycline (34%) and Tetracycline (28%) and the largest number of isolates expressing resistance was detected in water samples. The genetic origin of resistance was, for the most part, potentially chromosomal. The percentages of antimicrobial resistance observed in the bacteriota of sections of the Jaguaribe River basin indicate the effect of selective pressure related to the activities in its surroundings.
publishDate 2023
dc.date.issued.fl_str_mv 2023
dc.date.accessioned.fl_str_mv 2024-02-07T11:11:20Z
dc.date.available.fl_str_mv 2024-02-07T11:11:20Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv MARTINS, Sandra Rebeca Oliveira. Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil). 2023. 71 f. Dissertação (Mestrado em Ciências Marinhas Tropicais) - Programa de Pós-Graduação em Ciências Marinhas Tropicais, Instituto de Ciências do Mar - LABOMAR - Universidade Federal do Ceará. Fortaleza, 2023.
dc.identifier.uri.fl_str_mv http://repositorio.ufc.br/handle/riufc/76072
identifier_str_mv MARTINS, Sandra Rebeca Oliveira. Caracterização e avaliação dos padrões de resistência antimicrobiana no bacterioma da bacia do Rio Jaguaribe (Ceará, Brasil). 2023. 71 f. Dissertação (Mestrado em Ciências Marinhas Tropicais) - Programa de Pós-Graduação em Ciências Marinhas Tropicais, Instituto de Ciências do Mar - LABOMAR - Universidade Federal do Ceará. Fortaleza, 2023.
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