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Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)

Detalhes bibliográficos
Ano de defesa: 2009
Autor(a) principal: Perdigão, Anne Carolinne Bezerra
Orientador(a): Moura, Fernanda Edna Araújo
Banca de defesa: Não Informado pela instituição
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Não Informado pela instituição
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: http://www.repositorio.ufc.br/handle/riufc/1723
Resumo: The human respiratory syncytial virus (HRSV) is the major agent of lower respiratory tract in children under two years old. HRSV is characterized antigenically into two groups: A and B, and each group has several subgroups. Glycoprotein G is primarily responsible for the antigenic variation between and within groups of viruses. The aims of this study were to characterize the epidemic periods and the antigenic and genomic diversity of circulating HRSV in Fortaleza, Ceará - Brazil, for five consecutive epidemic periods (2004-2008). The screening of positive samples to HRSV and other viruses analyzed, as the antigenic characterization of HRSV was carried out by indirect immunofluorescence. RT-nested-PCR followed by partial sequencing of the gene G was used for genomic characterization of HRSV. The HRSV was detected in 456 of 2885 samples (15.8%). The peak of the epidemic periods of HRSV occurred from March to May related to rainfall. A total of 282 HRSV (62.8%) were characterized antigenically, with 170 HRSVA (60.3%) and 112 HRSVB (39.7%). Both groups circulated throughout the period analyzed with a predominance of HRSVA in all years of study. A total of 250 HRSV (54.8%) were submitted to RT-nested-PCR with amplification of 133 and sequencing of 86. The genomic characterization of HRSV identified subgroups GA2 and GA5 for HRSVA and subgroups GB3 and BA for HRSVB. In the years 2004, 2005 and 2007 both subgroups of HRSVA circulated. In 2008 only GA2 circulated. In 2004, 2007 and 2008 only the subgroup BA was present. In 2005 only the GB3 circulated. The HRSV A showed a higher variability in nucleotide sequences, indicating a possible positive selective pressure. There were variations in the beginning, end and duration of each epidemic period of HRSV, as well as in the occurrence of groups and subgroups.
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spelling Perdigão, Anne Carolinne BezerraMoura, Fernanda Edna Araújo2012-02-01T12:46:08Z2012-02-01T12:46:08Z2009PERDIGÃO, A. C. B. Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-ceará durante cinco períodos epidêmicos consecutivos (2004-2008). 2009. 125 f. Dissertação (Mestrado em Microbiologia Médica) - Universidade Federal do Ceará, Fortaleza, 2009.http://www.repositorio.ufc.br/handle/riufc/1723The human respiratory syncytial virus (HRSV) is the major agent of lower respiratory tract in children under two years old. HRSV is characterized antigenically into two groups: A and B, and each group has several subgroups. Glycoprotein G is primarily responsible for the antigenic variation between and within groups of viruses. The aims of this study were to characterize the epidemic periods and the antigenic and genomic diversity of circulating HRSV in Fortaleza, Ceará - Brazil, for five consecutive epidemic periods (2004-2008). The screening of positive samples to HRSV and other viruses analyzed, as the antigenic characterization of HRSV was carried out by indirect immunofluorescence. RT-nested-PCR followed by partial sequencing of the gene G was used for genomic characterization of HRSV. The HRSV was detected in 456 of 2885 samples (15.8%). The peak of the epidemic periods of HRSV occurred from March to May related to rainfall. A total of 282 HRSV (62.8%) were characterized antigenically, with 170 HRSVA (60.3%) and 112 HRSVB (39.7%). Both groups circulated throughout the period analyzed with a predominance of HRSVA in all years of study. A total of 250 HRSV (54.8%) were submitted to RT-nested-PCR with amplification of 133 and sequencing of 86. The genomic characterization of HRSV identified subgroups GA2 and GA5 for HRSVA and subgroups GB3 and BA for HRSVB. In the years 2004, 2005 and 2007 both subgroups of HRSVA circulated. In 2008 only GA2 circulated. In 2004, 2007 and 2008 only the subgroup BA was present. In 2005 only the GB3 circulated. The HRSV A showed a higher variability in nucleotide sequences, indicating a possible positive selective pressure. There were variations in the beginning, end and duration of each epidemic period of HRSV, as well as in the occurrence of groups and subgroups.vírus sincicial respiratório humano (VSRh) é o agente viral mais freqüentemente relacionado a infecções do trato respiratório inferior em crianças menores de dois anos de idade. O VSRh é caracterizado antigenicamente em dois grupos: A e B, e cada grupo apresenta vários subgrupos. A glicoproteína G é a principal responsável pela a variação antigênica inter e intragrupos desse vírus. Os objetivos desse estudo foram caracterizar os períodos epidêmicos e a diversidade antigênica e genômica dos VSRh circulantes em Fortaleza, Ceará – Brasil, durante cinco períodos epidêmicos consecutivos (2004-2008). A imunofluorescência indireta (IFI) foi utilizada para a triagem de VSRh e de todos os vírus analisados e para a caracterização antigênica dos VSRh. A RT-nested-PCR seguida do seqüenciamento parcial do gene G foi utilizada para a caracterização gênomica dos VSRh. O VSRh foi detectado em 456 das 2885 (15.8%) amostras. O pico dos períodos epidêmicos de VSRh ocorreu nos meses de março a maio relacionado à ocorrência de chuvas. Um total de 282 VSRh (62,8%) foram caracterizados antigenicamente por IFI, sendo 170 VSRhA (60,3%) e 112 VSRhB (39,7%). Ambos os grupos circularam durante todo o período analisado sendo observado o predomínio de A em todos os anos. Um total de 250 VSRh (54,8%) foi submetido à RT-nested-PCR com amplificação de 133 e seqüenciamento de 86. A caracterização genômica dos VSRh identificou os subgrupos GA2 e GA5 para o VSRhA e os subgrupos GB3 e BA para o VSRhB. Esses quatro subgrupos co-circularam durante o ano de 2006. Nos anos de 2004, 2005 e 2007 verificou-se a presença dos dois subgrupos de VSRhA. Em 2008 somente o GA2 circulou. Em 2004, 2007 e 2008 somente o subgrupo BA esteve presente. Em 2005 somente o GB3 circulou. Os VSRhA apresentaram uma maior variabilidade nas seqüências nucleotídicas, indicando uma possível pressão seletiva positiva. Houve variações no ínicio, fim e duração de cada período epidêmico de VSRh, assim como na circulação de grupos e subgrupos.EpidemiologiaVariação AntigênicaVírus Sinciciais RespiratóriosCaracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)Molecular characterization of human repiratório syncytial virus circulating in Fortaleza, Ceara during five consecutive epidemic periods (2004-2008)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisporreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFCinfo:eu-repo/semantics/openAccessLICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://repositorio.ufc.br/bitstream/riufc/1723/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52ORIGINAL2009_dis_acbperdigao.pdf2009_dis_acbperdigao.pdfapplication/pdf3269788http://repositorio.ufc.br/bitstream/riufc/1723/1/2009_dis_acbperdigao.pdfeff321085767d9a25b4cb27fb0afa18dMD51riufc/17232021-02-09 11:10:28.112oai:repositorio.ufc.br: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Repositório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2021-02-09T14:10:28Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false
dc.title.pt_BR.fl_str_mv Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)
dc.title.en.pt_BR.fl_str_mv Molecular characterization of human repiratório syncytial virus circulating in Fortaleza, Ceara during five consecutive epidemic periods (2004-2008)
title Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)
spellingShingle Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)
Perdigão, Anne Carolinne Bezerra
Epidemiologia
Variação Antigênica
Vírus Sinciciais Respiratórios
title_short Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)
title_full Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)
title_fullStr Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)
title_full_unstemmed Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)
title_sort Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-Ceará durante cinco períodos epidêmicos consecutivos (2004-2008)
author Perdigão, Anne Carolinne Bezerra
author_facet Perdigão, Anne Carolinne Bezerra
author_role author
dc.contributor.author.fl_str_mv Perdigão, Anne Carolinne Bezerra
dc.contributor.advisor1.fl_str_mv Moura, Fernanda Edna Araújo
contributor_str_mv Moura, Fernanda Edna Araújo
dc.subject.por.fl_str_mv Epidemiologia
Variação Antigênica
Vírus Sinciciais Respiratórios
topic Epidemiologia
Variação Antigênica
Vírus Sinciciais Respiratórios
description The human respiratory syncytial virus (HRSV) is the major agent of lower respiratory tract in children under two years old. HRSV is characterized antigenically into two groups: A and B, and each group has several subgroups. Glycoprotein G is primarily responsible for the antigenic variation between and within groups of viruses. The aims of this study were to characterize the epidemic periods and the antigenic and genomic diversity of circulating HRSV in Fortaleza, Ceará - Brazil, for five consecutive epidemic periods (2004-2008). The screening of positive samples to HRSV and other viruses analyzed, as the antigenic characterization of HRSV was carried out by indirect immunofluorescence. RT-nested-PCR followed by partial sequencing of the gene G was used for genomic characterization of HRSV. The HRSV was detected in 456 of 2885 samples (15.8%). The peak of the epidemic periods of HRSV occurred from March to May related to rainfall. A total of 282 HRSV (62.8%) were characterized antigenically, with 170 HRSVA (60.3%) and 112 HRSVB (39.7%). Both groups circulated throughout the period analyzed with a predominance of HRSVA in all years of study. A total of 250 HRSV (54.8%) were submitted to RT-nested-PCR with amplification of 133 and sequencing of 86. The genomic characterization of HRSV identified subgroups GA2 and GA5 for HRSVA and subgroups GB3 and BA for HRSVB. In the years 2004, 2005 and 2007 both subgroups of HRSVA circulated. In 2008 only GA2 circulated. In 2004, 2007 and 2008 only the subgroup BA was present. In 2005 only the GB3 circulated. The HRSV A showed a higher variability in nucleotide sequences, indicating a possible positive selective pressure. There were variations in the beginning, end and duration of each epidemic period of HRSV, as well as in the occurrence of groups and subgroups.
publishDate 2009
dc.date.issued.fl_str_mv 2009
dc.date.accessioned.fl_str_mv 2012-02-01T12:46:08Z
dc.date.available.fl_str_mv 2012-02-01T12:46:08Z
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dc.identifier.citation.fl_str_mv PERDIGÃO, A. C. B. Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-ceará durante cinco períodos epidêmicos consecutivos (2004-2008). 2009. 125 f. Dissertação (Mestrado em Microbiologia Médica) - Universidade Federal do Ceará, Fortaleza, 2009.
dc.identifier.uri.fl_str_mv http://www.repositorio.ufc.br/handle/riufc/1723
identifier_str_mv PERDIGÃO, A. C. B. Caracterização molecular dos vírus sincicial respiratório humano circulantes em Fortaleza-ceará durante cinco períodos epidêmicos consecutivos (2004-2008). 2009. 125 f. Dissertação (Mestrado em Microbiologia Médica) - Universidade Federal do Ceará, Fortaleza, 2009.
url http://www.repositorio.ufc.br/handle/riufc/1723
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