Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza

Detalhes bibliográficos
Ano de defesa: 2024
Autor(a) principal: Aksenen, Cleber Furtado
Orientador(a): Miyajima, Fábio
Banca de defesa: Não Informado pela instituição
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Não Informado pela instituição
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Área do conhecimento CNPq:
Link de acesso: http://repositorio.ufc.br/handle/riufc/78424
Resumo: The evolution of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has led to the emergence of increasingly adapted variants to the epidemiological landscape, in addition to fluctuations in the number of cases and deaths from the disease (COVID19) during critical moments of the pandemic. Multiple vaccination campaigns with different combinations of technologies, along with successive reinfections/exposures to the virus, have resulted in variations in individual seroepidemiological profiles, highlighting the multivariate nature of the immune system's defense mechanisms. Therefore, the investigation of specific anti-SARS-CoV-2 antibodies becomes relevant for assessing the level of humoral response and seroconversion resulting from successive exposures and cycles of population immunization. In this context, the study was conducted with 17,904 donors between 2020 and 2024 in Fortaleza, along with active recruitment of a subgroup of participants. A comparison of sociodemographic, temporal, and immunological data, including self-reported responses, hematological, biochemical, and serological tests for a prospective subgroup, was performed. Independent statistical analyses of the variables were conducted using Mann-Whitney tests for two groups and Kruskal-Wallis tests for more than two groups, along with post-hoc analyses with Bonferroni corrections and effect size calculations. A multivariate investigation was included, using three supervised learning models: Support Vector Machine (SVM), Logistic Regression (LR), and Gradient Boosting (GB), to predict the stratification of individual profiles into different outcomes. The evaluated participants were representative of the 12 regions of Fortaleza, with broader coverage of the area near the blood center. The majority were aged between 16 and 29 years, predominantly male, of mixed race, and with completed high school education. There was a statistical association between antibody titers when compared across different periods and vaccine doses, as well as multiple correlations between sociodemographic variables. The GB model showed the best performance in predicting outcomes for the dataset (2020 to 2024). Vaccination, primarily with the Pfizer vaccine, stood out as a key feature for the models. This work emphasizes the importance of using a high-granularity dataset to select candidates, aiming for a better understanding of the seroepidemiological variability in relation to COVID-19.
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spelling Aksenen, Cleber FurtadoMiyajima, Fábio2024-10-08T15:02:26Z2024-10-08T15:02:26Z2024AKSENEN, Cleber Furtado. Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza. 2024. Dissertação (Mestrado em Farmacologia) – Faculdade de Medicina, Universidade Federal do Ceará, Fortaleza, 2024. Disponível em: http://www.repositorio.ufc.br/handle/riufc/78424. Acesso em: 08 out. 2024.http://repositorio.ufc.br/handle/riufc/78424The evolution of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has led to the emergence of increasingly adapted variants to the epidemiological landscape, in addition to fluctuations in the number of cases and deaths from the disease (COVID19) during critical moments of the pandemic. Multiple vaccination campaigns with different combinations of technologies, along with successive reinfections/exposures to the virus, have resulted in variations in individual seroepidemiological profiles, highlighting the multivariate nature of the immune system's defense mechanisms. Therefore, the investigation of specific anti-SARS-CoV-2 antibodies becomes relevant for assessing the level of humoral response and seroconversion resulting from successive exposures and cycles of population immunization. In this context, the study was conducted with 17,904 donors between 2020 and 2024 in Fortaleza, along with active recruitment of a subgroup of participants. A comparison of sociodemographic, temporal, and immunological data, including self-reported responses, hematological, biochemical, and serological tests for a prospective subgroup, was performed. Independent statistical analyses of the variables were conducted using Mann-Whitney tests for two groups and Kruskal-Wallis tests for more than two groups, along with post-hoc analyses with Bonferroni corrections and effect size calculations. A multivariate investigation was included, using three supervised learning models: Support Vector Machine (SVM), Logistic Regression (LR), and Gradient Boosting (GB), to predict the stratification of individual profiles into different outcomes. The evaluated participants were representative of the 12 regions of Fortaleza, with broader coverage of the area near the blood center. The majority were aged between 16 and 29 years, predominantly male, of mixed race, and with completed high school education. There was a statistical association between antibody titers when compared across different periods and vaccine doses, as well as multiple correlations between sociodemographic variables. The GB model showed the best performance in predicting outcomes for the dataset (2020 to 2024). Vaccination, primarily with the Pfizer vaccine, stood out as a key feature for the models. This work emphasizes the importance of using a high-granularity dataset to select candidates, aiming for a better understanding of the seroepidemiological variability in relation to COVID-19.A constante evolução do Coronavírus da Síndrome Respiratória Aguda Grave 2 (SARSCoV-2) tem resultado na emergência de variantes cada vez mais adaptadas ao cenário epidemiológico, além de variações do número de casos e óbitos pela doença (COVID-19) em momentos cruciais da pandemia. Múltiplas campanhas de vacinação em diferentes combinações de tecnologias, juntamente com sucessivas reinfecções/exposições ao vírus, culminaram em variação dos perfis soroepidemiológicos individuais, dando destaque ao caráter multivariado dos mecanismos de defesa do sistema imunológico. Assim, a investigação de anticorpos específicos anti-SARS-CoV-2 se torna relevante para avaliação do nível de resposta humoral e soroconversão decorrentes de sucessivas exposições e ciclos de imunização populacional. Nesse contexto, o estudo foi conduzido com 17.904 doadores durante o período de 2020 a 2024 em Fortaleza, somado a um recrutamento ativo de um subgrupo de participantes. Uma comparação de dados sociodemográficos, temporais e imunológicos, incluindo respostas autodeclaradas, exames hematológicos, bioquímicos e sorológicos para um subgrupo prospectivo foi realizada. Foram conduzidas análises estatísticas das variáveis de forma independente, através dos testes de Mann-Whitney para 2 grupos e Kruskal-Wallis para mais de dois grupos, somado a análises de post hoc, com correções de Bonferroni e cálculo do tamanho do efeito. Uma investigação multivariada foi inclusa, utilizando três modelos de aprendizagem supervisionada: Support Vector Machine (SVM), Regressão logística (RL) e Gradient Boosting (GB), com o intuito de prever a estratificação dos perfis individuais em diferentes resultados. Os participantes avaliados foram representativos para as 12 regionais de Fortaleza, sendo mais abrangente para o território próximo ao hemocentro. Em sua maioria, apresentaram idade entre 16 e 29 anos, predomínio do sexo masculino, ser pardo e ter ensino médio completo. Houve associação estatística entre a titulação de anticorpos quando comparada a diferentes períodos e doses da vacina, além de múltiplas correlações entre as variáveis sociodemográficas. O modelo de GB apresentou melhor desempenho para previsão dos resultados para a base de dados (2020 a 2024). Destacouse primariamente a vacinação e a fabricante Pfizer como características de impacto para os modelos. Este trabalho destaca a relevância de se utilizar uma base de dados com alta granularidade para a seleção racional de candidatos, visando uma melhor compreensão da variabilidade soroepidemiológica da população em relação à COVID-19.Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de FortalezaSerological and epidemiological investigation of predictive factors associated with the humoral response profile of COVID-19 in blood donors from Fortalezainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisTeste Sorológico para COVID-19Vigilância em Saúde PúblicaTestes SorológicosAprendizado de Máquina SupervisionadoCOVID-19 Serological TestingPublic Health SurveillanceSerologic TestsSupervised Machine LearningCNPQ::CIENCIAS BIOLOGICASinfo:eu-repo/semantics/openAccessporreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFChttp://lattes.cnpq.br/8053662536050751http://lattes.cnpq.br/09982354206348872024ORIGINAL2024_dis_cfaksenen.pdf2024_dis_cfaksenen.pdfapplication/pdf8080798http://repositorio.ufc.br/bitstream/riufc/78424/3/2024_dis_cfaksenen.pdfcbe80be1a33fceee22fb97eadae7178fMD53LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://repositorio.ufc.br/bitstream/riufc/78424/5/license.txt8a4605be74aa9ea9d79846c1fba20a33MD55riufc/784242024-10-08 12:20:00.71oai:repositorio.ufc.br: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Repositório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2024-10-08T15:20Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false
dc.title.pt_BR.fl_str_mv Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza
dc.title.en.pt_BR.fl_str_mv Serological and epidemiological investigation of predictive factors associated with the humoral response profile of COVID-19 in blood donors from Fortaleza
title Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza
spellingShingle Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza
Aksenen, Cleber Furtado
CNPQ::CIENCIAS BIOLOGICAS
Teste Sorológico para COVID-19
Vigilância em Saúde Pública
Testes Sorológicos
Aprendizado de Máquina Supervisionado
COVID-19 Serological Testing
Public Health Surveillance
Serologic Tests
Supervised Machine Learning
title_short Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza
title_full Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza
title_fullStr Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza
title_full_unstemmed Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza
title_sort Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza
author Aksenen, Cleber Furtado
author_facet Aksenen, Cleber Furtado
author_role author
dc.contributor.author.fl_str_mv Aksenen, Cleber Furtado
dc.contributor.advisor1.fl_str_mv Miyajima, Fábio
contributor_str_mv Miyajima, Fábio
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS
topic CNPQ::CIENCIAS BIOLOGICAS
Teste Sorológico para COVID-19
Vigilância em Saúde Pública
Testes Sorológicos
Aprendizado de Máquina Supervisionado
COVID-19 Serological Testing
Public Health Surveillance
Serologic Tests
Supervised Machine Learning
dc.subject.ptbr.pt_BR.fl_str_mv Teste Sorológico para COVID-19
Vigilância em Saúde Pública
Testes Sorológicos
Aprendizado de Máquina Supervisionado
dc.subject.en.pt_BR.fl_str_mv COVID-19 Serological Testing
Public Health Surveillance
Serologic Tests
Supervised Machine Learning
description The evolution of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has led to the emergence of increasingly adapted variants to the epidemiological landscape, in addition to fluctuations in the number of cases and deaths from the disease (COVID19) during critical moments of the pandemic. Multiple vaccination campaigns with different combinations of technologies, along with successive reinfections/exposures to the virus, have resulted in variations in individual seroepidemiological profiles, highlighting the multivariate nature of the immune system's defense mechanisms. Therefore, the investigation of specific anti-SARS-CoV-2 antibodies becomes relevant for assessing the level of humoral response and seroconversion resulting from successive exposures and cycles of population immunization. In this context, the study was conducted with 17,904 donors between 2020 and 2024 in Fortaleza, along with active recruitment of a subgroup of participants. A comparison of sociodemographic, temporal, and immunological data, including self-reported responses, hematological, biochemical, and serological tests for a prospective subgroup, was performed. Independent statistical analyses of the variables were conducted using Mann-Whitney tests for two groups and Kruskal-Wallis tests for more than two groups, along with post-hoc analyses with Bonferroni corrections and effect size calculations. A multivariate investigation was included, using three supervised learning models: Support Vector Machine (SVM), Logistic Regression (LR), and Gradient Boosting (GB), to predict the stratification of individual profiles into different outcomes. The evaluated participants were representative of the 12 regions of Fortaleza, with broader coverage of the area near the blood center. The majority were aged between 16 and 29 years, predominantly male, of mixed race, and with completed high school education. There was a statistical association between antibody titers when compared across different periods and vaccine doses, as well as multiple correlations between sociodemographic variables. The GB model showed the best performance in predicting outcomes for the dataset (2020 to 2024). Vaccination, primarily with the Pfizer vaccine, stood out as a key feature for the models. This work emphasizes the importance of using a high-granularity dataset to select candidates, aiming for a better understanding of the seroepidemiological variability in relation to COVID-19.
publishDate 2024
dc.date.accessioned.fl_str_mv 2024-10-08T15:02:26Z
dc.date.available.fl_str_mv 2024-10-08T15:02:26Z
dc.date.issued.fl_str_mv 2024
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv AKSENEN, Cleber Furtado. Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza. 2024. Dissertação (Mestrado em Farmacologia) – Faculdade de Medicina, Universidade Federal do Ceará, Fortaleza, 2024. Disponível em: http://www.repositorio.ufc.br/handle/riufc/78424. Acesso em: 08 out. 2024.
dc.identifier.uri.fl_str_mv http://repositorio.ufc.br/handle/riufc/78424
identifier_str_mv AKSENEN, Cleber Furtado. Investigação soro-epidemiológica de fatores preditivos associados ao perfil de resposta imune humoral da COVID-19 em doadores de sangue de Fortaleza. 2024. Dissertação (Mestrado em Farmacologia) – Faculdade de Medicina, Universidade Federal do Ceará, Fortaleza, 2024. Disponível em: http://www.repositorio.ufc.br/handle/riufc/78424. Acesso em: 08 out. 2024.
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dc.source.none.fl_str_mv reponame:Repositório Institucional da Universidade Federal do Ceará (UFC)
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