Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas

Detalhes bibliográficos
Ano de defesa: 2019
Autor(a) principal: Guimarães, Larissa Alves
Orientador(a): Costa-Lotufo, Letícia Veras
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Não Informado pela instituição
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: http://www.repositorio.ufc.br/handle/riufc/38853
Resumo: The development of different strategies for prospecting natural products which have the molecular target as the key perspective has contributed to innovation and discovery of new substances with anticancer potential. In this context, this work carried out the study of natural products from marine actinobacteria through different approaches for the elucidation of the molecular target of action of the isolated substance (chapter I) and for the target-oriented prospection of natural products (chapter II). In the first study, chlorizidine A, isolated from Streptomyces sp. and with known antitumor potential, was subjected to the immunoaffinity fluorescence (IAF) approach to elucidate its molecular target and to investigate its cytotoxic activity in tumor cells. The IAF probe of chlorizidine A was synthesized from the coupling of the IAF tag to the natural molecule and, in cell colocalization studies, the probe was initially dispersed in the cytosol and subsequently concentrated in the lysosomes of HCT-116 cells. Enolase 1 (ENO1) and GAPDH, two proteins of the glycolytic pathway, were detected in higher abundance in the treated cells. Chlorizidine A and its IAF probe were able to bind to recombinant ENO1, indicating that as the target protein of the natural molecule, while evaluation of the cytotoxic activity suggested the occurrence of inhibition of cell proliferation related to changes occurring in the G0/G1 phase, by inhibition of the glycolytic pathway. The second study used a bioaffinity-based assay to identify substances with anticancer potential that bind to inhibitors of apoptosis proteins (IAPs) in extracts of marine actinobacteria. The bioaffinity assay using the recombinant target proteins survivin, livin and BIR3-XIAP, and 21 extracts of marine actinobacteria, recovered 100 hits, most of which were detected for the three target proteins. The molecular network with 21 analyzed extracts allowed the identification of groups of compounds corresponding to seven different classes of known natural products. Dereplication of the 12 hits identified for strain BRA177 (Actinomadura sp.) through the DNP and AntiMarin databases, along with comparison of the respective fragmentation spectra, indicated that these compounds belong to the classes of tambjamines and prodiginines. The chemical fractionation of the BRA177 extract led to the isolation of three prodiginines, methylcyclooctylprodigiosine (1), cyclononylprodigiosine (2) and nonylprodigiosine (3), corresponding to the hits obtained in the bioaffinity assay. Hits 2 and 3 were cytotoxic to tumor cell lines by short- and long-term exposure. Thus, these findings open perspectives for investigation of the relationship between the inhibition of glycolytic pathway and the anticancer activity of chlorizidine A, and for investigation of the BRA117’s prodiginines and tambjamines interaction with IAPs proteins.
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spelling Guimarães, Larissa AlvesCosta-Lotufo, Letícia Veras2019-01-17T18:16:01Z2019-01-17T18:16:01Z2019-01-17GUIMARÃES, L. A. Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas. 2018. 219 f. Tese. (Doutorado em Farmacologia) - Faculdade de Medicina. Universidade Federal do Ceará, Fortaleza, 2018.http://www.repositorio.ufc.br/handle/riufc/38853The development of different strategies for prospecting natural products which have the molecular target as the key perspective has contributed to innovation and discovery of new substances with anticancer potential. In this context, this work carried out the study of natural products from marine actinobacteria through different approaches for the elucidation of the molecular target of action of the isolated substance (chapter I) and for the target-oriented prospection of natural products (chapter II). In the first study, chlorizidine A, isolated from Streptomyces sp. and with known antitumor potential, was subjected to the immunoaffinity fluorescence (IAF) approach to elucidate its molecular target and to investigate its cytotoxic activity in tumor cells. The IAF probe of chlorizidine A was synthesized from the coupling of the IAF tag to the natural molecule and, in cell colocalization studies, the probe was initially dispersed in the cytosol and subsequently concentrated in the lysosomes of HCT-116 cells. Enolase 1 (ENO1) and GAPDH, two proteins of the glycolytic pathway, were detected in higher abundance in the treated cells. Chlorizidine A and its IAF probe were able to bind to recombinant ENO1, indicating that as the target protein of the natural molecule, while evaluation of the cytotoxic activity suggested the occurrence of inhibition of cell proliferation related to changes occurring in the G0/G1 phase, by inhibition of the glycolytic pathway. The second study used a bioaffinity-based assay to identify substances with anticancer potential that bind to inhibitors of apoptosis proteins (IAPs) in extracts of marine actinobacteria. The bioaffinity assay using the recombinant target proteins survivin, livin and BIR3-XIAP, and 21 extracts of marine actinobacteria, recovered 100 hits, most of which were detected for the three target proteins. The molecular network with 21 analyzed extracts allowed the identification of groups of compounds corresponding to seven different classes of known natural products. Dereplication of the 12 hits identified for strain BRA177 (Actinomadura sp.) through the DNP and AntiMarin databases, along with comparison of the respective fragmentation spectra, indicated that these compounds belong to the classes of tambjamines and prodiginines. The chemical fractionation of the BRA177 extract led to the isolation of three prodiginines, methylcyclooctylprodigiosine (1), cyclononylprodigiosine (2) and nonylprodigiosine (3), corresponding to the hits obtained in the bioaffinity assay. Hits 2 and 3 were cytotoxic to tumor cell lines by short- and long-term exposure. Thus, these findings open perspectives for investigation of the relationship between the inhibition of glycolytic pathway and the anticancer activity of chlorizidine A, and for investigation of the BRA117’s prodiginines and tambjamines interaction with IAPs proteins.O desenvolvimento de diferentes estratégias de prospecção de produtos naturais que têm o alvo molecular como perspectiva-chave, tem contribuído para inovação e descoberta de novas substâncias com potencial anticâncer. Nesse contexto, este trabalho realizou o estudo de produtos naturais de actinobactérias marinhas através de diferentes tipos de abordagem para a elucidação do alvo molecular de ação da substância isolada (capítulo I) e para a prospecção alvo-dirigida de produtos naturais (capítulo II). No primeiro estudo, clorizidina A, isolada de Streptomyces sp. e com atividade antitumoral conhecida, foi submetida a abordagem de marcação por fluorescência de imunoafinidade (IAF) com o objetivo de elucidar o alvo molecular e investigar sua atividade citotóxica em células tumorais. A sonda IAF da clorizidina A foi sintetizada a partir do acoplamento do marcador IAF à referida molécula e, nos estudos de localização celular, a sonda apresentou-se, inicialmente, dispersa no citosol e, posteriormente, concentrada em lisossomos de células HCT-116. A Enolase 1 (ENO1) e a GAPDH, duas proteínas da via glicotítica, foram detectadas em maior abundância nas células tratadas. A Clorizidina A e sua sonda foram capazes de ligar-se a ENO1 recombinante, indicando-a como a proteína-alvo da molécula natural, e a avaliação da atividade citotóxica indicou a ocorrência de inibição da proliferação celular relacionada a alterações ocorridas na fase G0/G1, mediante inibição da via glicolítica. O segundo estudo utilizou o ensaio de bioafinidade (EB) com o objetivo de identificar substâncias ligantes das proteínas inibidoras da apoptose (IAPs) e com potencial anticâncer, em extratos de actinobactérias marinhas. O EB com as proteínas-alvo survivina, livina e BIR3-XIAP recombinantes, e 21 extratos de actinobactérias marinhas, resultou na detecção de 100 potenciais hits, cuja maioria foi detectada para as três proteínas-alvo. A rede molecular com 21 extratos analisados permitiu a identificação de grupos de compostos correspondentes a sete diferentes classes de produtos naturais conhecidas. A desreplicação dos 12 hits da cepa BRA177 (Actinomadura sp.) através das bases de dados DNP e AntiMarin, e comparação dos respectivos espectros de fragmentação, indicou que estes compostos pertencem as classes das tambjaminas e prodigininas. O fracionamento químico do extrato de BRA177 levou ao isolamento de três prodigininas, metilciclooctilprodigiosina (1), ciclononilprodigiosina (2) e nonilprodigiosina, (3), correspondentes aos hits obtidos no EB. Os hits 2 e 3 apresentaram-se citotóxicos a linhagens tumorais, após exposição a curto e longo prazos. Dessa forma, estes achados abrem perspectivas para a investigação da relação entre a inibição da via glicolítica e a atividade anticâncer da clorizidina A e, para investigação da interação das prodigininas e tambjaminas de BRA117 com as proteínas IAPs.FluorescênciaApoptoseWestern BlottingEstudos alvo-direcionados de produtos naturais de actinobactérias marinhasTargeted-directed studies of natural products from marine actinobacteriasinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisporreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFCinfo:eu-repo/semantics/openAccessLICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://repositorio.ufc.br/bitstream/riufc/38853/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52ORIGINAL2018_tese_laguimaraes.pdf2018_tese_laguimaraes.pdfapplication/pdf17277382http://repositorio.ufc.br/bitstream/riufc/38853/1/2018_tese_laguimaraes.pdf9c3e091c0a727397b57a272c1cb472fdMD51riufc/388532019-10-23 11:44:48.768oai:repositorio.ufc.br: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Repositório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2019-10-23T14:44:48Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false
dc.title.pt_BR.fl_str_mv Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas
dc.title.en.pt_BR.fl_str_mv Targeted-directed studies of natural products from marine actinobacterias
title Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas
spellingShingle Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas
Guimarães, Larissa Alves
Fluorescência
Apoptose
Western Blotting
title_short Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas
title_full Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas
title_fullStr Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas
title_full_unstemmed Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas
title_sort Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas
author Guimarães, Larissa Alves
author_facet Guimarães, Larissa Alves
author_role author
dc.contributor.author.fl_str_mv Guimarães, Larissa Alves
dc.contributor.advisor1.fl_str_mv Costa-Lotufo, Letícia Veras
contributor_str_mv Costa-Lotufo, Letícia Veras
dc.subject.por.fl_str_mv Fluorescência
Apoptose
Western Blotting
topic Fluorescência
Apoptose
Western Blotting
description The development of different strategies for prospecting natural products which have the molecular target as the key perspective has contributed to innovation and discovery of new substances with anticancer potential. In this context, this work carried out the study of natural products from marine actinobacteria through different approaches for the elucidation of the molecular target of action of the isolated substance (chapter I) and for the target-oriented prospection of natural products (chapter II). In the first study, chlorizidine A, isolated from Streptomyces sp. and with known antitumor potential, was subjected to the immunoaffinity fluorescence (IAF) approach to elucidate its molecular target and to investigate its cytotoxic activity in tumor cells. The IAF probe of chlorizidine A was synthesized from the coupling of the IAF tag to the natural molecule and, in cell colocalization studies, the probe was initially dispersed in the cytosol and subsequently concentrated in the lysosomes of HCT-116 cells. Enolase 1 (ENO1) and GAPDH, two proteins of the glycolytic pathway, were detected in higher abundance in the treated cells. Chlorizidine A and its IAF probe were able to bind to recombinant ENO1, indicating that as the target protein of the natural molecule, while evaluation of the cytotoxic activity suggested the occurrence of inhibition of cell proliferation related to changes occurring in the G0/G1 phase, by inhibition of the glycolytic pathway. The second study used a bioaffinity-based assay to identify substances with anticancer potential that bind to inhibitors of apoptosis proteins (IAPs) in extracts of marine actinobacteria. The bioaffinity assay using the recombinant target proteins survivin, livin and BIR3-XIAP, and 21 extracts of marine actinobacteria, recovered 100 hits, most of which were detected for the three target proteins. The molecular network with 21 analyzed extracts allowed the identification of groups of compounds corresponding to seven different classes of known natural products. Dereplication of the 12 hits identified for strain BRA177 (Actinomadura sp.) through the DNP and AntiMarin databases, along with comparison of the respective fragmentation spectra, indicated that these compounds belong to the classes of tambjamines and prodiginines. The chemical fractionation of the BRA177 extract led to the isolation of three prodiginines, methylcyclooctylprodigiosine (1), cyclononylprodigiosine (2) and nonylprodigiosine (3), corresponding to the hits obtained in the bioaffinity assay. Hits 2 and 3 were cytotoxic to tumor cell lines by short- and long-term exposure. Thus, these findings open perspectives for investigation of the relationship between the inhibition of glycolytic pathway and the anticancer activity of chlorizidine A, and for investigation of the BRA117’s prodiginines and tambjamines interaction with IAPs proteins.
publishDate 2019
dc.date.accessioned.fl_str_mv 2019-01-17T18:16:01Z
dc.date.available.fl_str_mv 2019-01-17T18:16:01Z
dc.date.issued.fl_str_mv 2019-01-17
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dc.identifier.citation.fl_str_mv GUIMARÃES, L. A. Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas. 2018. 219 f. Tese. (Doutorado em Farmacologia) - Faculdade de Medicina. Universidade Federal do Ceará, Fortaleza, 2018.
dc.identifier.uri.fl_str_mv http://www.repositorio.ufc.br/handle/riufc/38853
identifier_str_mv GUIMARÃES, L. A. Estudos alvo-direcionados de produtos naturais de actinobactérias marinhas. 2018. 219 f. Tese. (Doutorado em Farmacologia) - Faculdade de Medicina. Universidade Federal do Ceará, Fortaleza, 2018.
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