Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de Alzheimer

Detalhes bibliográficos
Ano de defesa: 2018
Autor(a) principal: Almeida, Jucimara Ferreira Figueiredo
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal do Espírito Santo
BR
Mestrado em Biotecnologia
Centro de Ciências da Saúde
UFES
Programa de Pós-Graduação em Biotecnologia
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
61
Link de acesso: http://repositorio.ufes.br/handle/10/7115
Resumo: Alzheimer's disease (AD) is one of the most common types of dementia. It has pathological changes, such as amyloid plaques and neurofibrillary tangles. In 98% of the cases, AD is sporadic or late-onset AD (LOAD) and presents a multifactorial characteristic. Variants rs670139 in MS4A4E gene and rs9349407 in CD2AP gene were considered associated with the risk in LOAD in studies with Genome wide association studies. The clinical diagnosis of AD is difficult and is only possible when the disease is already in advanced stages, so the studies are seeking to find biomarkers to help diagnose the disease in the early stages. Thus, in recent years, several case-control studies have been published investigating the association of rs670139 MS4A4E gene and rs9349407 CD2AP gene with LOAD in other populations. Thus, this study aimed to investigate the association between rs670139 MS4A4E and rs9349407 CD2AP with LOAD in a sample of individuals from Grande Vitória, ES and conduct an updated meta-analysis study on the association of these variants with the disease. The study performed was an association study with 221 individuals not consanguineous, including 139 individuals without Dementia matched by sex and age and 82 patients with diagnosis of probable LOAD. It was performed Polymerase Chain Reaction – Restriction Fragment Length Polymorphism for genotyping. As statistical analysis, it was performed Chi-square test, Odds ratio (Confidential interval of 95%), Mann-Whitney and Logistic regression at SPSS software. It was considered p significance with value < 0.05. It was also calculated the Hardy-Weinberg Equilibrium for each group. The genotype results were validated by sequencing in 5% of the samples. In the meta-analysis, the allelic comparison by additive genetic model was performed by R Program. The results obtained in this study suggest that the A allele of rs670139 MS4A4E is associated with risk in LOAD in meta-analysis. This result supports a role of risk of rs670139, since this SNP in functional studies has been correlated with increased amyloid plaques. However, there is no association of rs670139 MS4A4E and rs9349407 CD2AP polymorphisms with LOAD in the population of Grande Vitória, ES and the meta-analysis there is no association of rs9349407 CD2AP polymorphisms with LOAD. The results of this work are important to help validate the role of genetic variants on the risk for LOAD.
id UFES_dc841f95670be2aeb12aeedf121d82ce
oai_identifier_str oai:repositorio.ufes.br:10/7115
network_acronym_str UFES
network_name_str Repositório Institucional da Universidade Federal do Espírito Santo (riUfes)
repository_id_str
spelling Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de AlzheimerSporadic Alzheimer's DiseaseAssociation studyDoença de Alzheimer esporádicars670139rs9349407Estudo de associaçãoAlzheimer, Doença deMarcadores biológicosBiotecnologiaBiotecnologia61Alzheimer's disease (AD) is one of the most common types of dementia. It has pathological changes, such as amyloid plaques and neurofibrillary tangles. In 98% of the cases, AD is sporadic or late-onset AD (LOAD) and presents a multifactorial characteristic. Variants rs670139 in MS4A4E gene and rs9349407 in CD2AP gene were considered associated with the risk in LOAD in studies with Genome wide association studies. The clinical diagnosis of AD is difficult and is only possible when the disease is already in advanced stages, so the studies are seeking to find biomarkers to help diagnose the disease in the early stages. Thus, in recent years, several case-control studies have been published investigating the association of rs670139 MS4A4E gene and rs9349407 CD2AP gene with LOAD in other populations. Thus, this study aimed to investigate the association between rs670139 MS4A4E and rs9349407 CD2AP with LOAD in a sample of individuals from Grande Vitória, ES and conduct an updated meta-analysis study on the association of these variants with the disease. The study performed was an association study with 221 individuals not consanguineous, including 139 individuals without Dementia matched by sex and age and 82 patients with diagnosis of probable LOAD. It was performed Polymerase Chain Reaction – Restriction Fragment Length Polymorphism for genotyping. As statistical analysis, it was performed Chi-square test, Odds ratio (Confidential interval of 95%), Mann-Whitney and Logistic regression at SPSS software. It was considered p significance with value < 0.05. It was also calculated the Hardy-Weinberg Equilibrium for each group. The genotype results were validated by sequencing in 5% of the samples. In the meta-analysis, the allelic comparison by additive genetic model was performed by R Program. The results obtained in this study suggest that the A allele of rs670139 MS4A4E is associated with risk in LOAD in meta-analysis. This result supports a role of risk of rs670139, since this SNP in functional studies has been correlated with increased amyloid plaques. However, there is no association of rs670139 MS4A4E and rs9349407 CD2AP polymorphisms with LOAD in the population of Grande Vitória, ES and the meta-analysis there is no association of rs9349407 CD2AP polymorphisms with LOAD. The results of this work are important to help validate the role of genetic variants on the risk for LOAD.A doença de Alzheimer (DA) é um dos tipos mais comuns de demência. Possui alterações patológicas como placas amilóides e emaranhados de neurofibrilas. A forma esporádica (DAE) representa 98% dos casos da doença de Alzheimer e apresenta etiologia multifatorial. A variante rs670139 do gene MS4A4E e rs9349407 do gene CD2AP foram consideradas, em estudos de Genome wide association studies, como associadas ao risco na DAE. O diagnóstico clínico da DA é difícil e apenas possível quando a doença já está em estágios avançados, sendo assim, estudos buscam encontrar biomarcadores para auxiliar no diagnóstico da doença em estágios precoces. Com isso, nos últimos anos, foram publicados vários estudos casocontrole investigando a associação de rs670139 do gene MS4A4E e rs9349407 do gene CD2AP com DAE em outras populações. Assim, este trabalho teve como objetivo investigar a associação entre o polimorfismo rs670139 MS4A4E e rs9349407 CD2AP com DAE em uma amostra de indivíduos da população da Grande Vitória, ES e realizar um estudo de meta-análise atualizado sobre a associação destas variantes com a doença. O estudo de associação foi realizado com uma amostra composta por 221 indivíduos não consanguíneos, sendo 139 indivíduos saudáveis e 82 pacientes com diagnóstico provável de DAE, pareados em relação à idade e gênero. As amostras foram genotipadas por Polymerase Chain Reaction – Restriction Fragment Length Polymorphism. O Equilíbrio de Hardy-Weinberg foi calculado para cada grupo estudado. Os resultados de genotipagem foram validados por sequenciamento em 5% das amostras. Os dados foram analisados pelos testes estatísticos de Qui-quadrado, Odds ratio (Intervalo de confiança de 95%), Mann-Whitney e Regressão logística no programa SPSS (valores de p ≤ 0,05 foram considerados significativos). Na metaanálise a comparação alélica seguindo o modelo genético aditivo foi realizada pelo programa R. Os resultados obtidos neste estudo sugerem que o alelo A de rs670139 MS4A4E está associado ao risco na DAE. Este resultado apoia o papel de risco do rs670139, uma vez que, o polimorfismo, em estudos funcionais, foi correlacionado com o aumento das placas neuríticas. No entanto, não houve associação do polimorfismo rs670139 MS4A4E e rs9349407 CD2AP com DAE na população da Grande Vitória, ES e a meta-análise não encontrou associação para o rs9349407 CD2AP. Os resultados deste trabalho são importantes para ajudar a validar o papel das variantes genéticas sobre o risco de DAE.Universidade Federal do Espírito SantoBRMestrado em BiotecnologiaCentro de Ciências da SaúdeUFESPrograma de Pós-Graduação em BiotecnologiaPaula, Flavia deZeidler, Sandra Lúcia Ventorin vonMaranduba, Carlos Magno da CostaAlmeida, Jucimara Ferreira Figueiredo2018-08-01T21:35:03Z2018-08-012018-08-01T21:35:03Z2018-02-26info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisTextapplication/pdfhttp://repositorio.ufes.br/handle/10/7115porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da Universidade Federal do Espírito Santo (riUfes)instname:Universidade Federal do Espírito Santo (UFES)instacron:UFES2024-07-16T17:09:39Zoai:repositorio.ufes.br:10/7115Repositório InstitucionalPUBhttp://repositorio.ufes.br/oai/requestriufes@ufes.bropendoar:21082024-07-16T17:09:39Repositório Institucional da Universidade Federal do Espírito Santo (riUfes) - Universidade Federal do Espírito Santo (UFES)false
dc.title.none.fl_str_mv Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de Alzheimer
title Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de Alzheimer
spellingShingle Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de Alzheimer
Almeida, Jucimara Ferreira Figueiredo
Sporadic Alzheimer's Disease
Association study
Doença de Alzheimer esporádica
rs670139
rs9349407
Estudo de associação
Alzheimer, Doença de
Marcadores biológicos
Biotecnologia
Biotecnologia
61
title_short Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de Alzheimer
title_full Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de Alzheimer
title_fullStr Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de Alzheimer
title_full_unstemmed Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de Alzheimer
title_sort Meta-análise e estudo de associação na busca de biomarcadores de diagnóstico nos genes CD2AP e MS4A4E para a doença de Alzheimer
author Almeida, Jucimara Ferreira Figueiredo
author_facet Almeida, Jucimara Ferreira Figueiredo
author_role author
dc.contributor.none.fl_str_mv Paula, Flavia de
Zeidler, Sandra Lúcia Ventorin von
Maranduba, Carlos Magno da Costa
dc.contributor.author.fl_str_mv Almeida, Jucimara Ferreira Figueiredo
dc.subject.por.fl_str_mv Sporadic Alzheimer's Disease
Association study
Doença de Alzheimer esporádica
rs670139
rs9349407
Estudo de associação
Alzheimer, Doença de
Marcadores biológicos
Biotecnologia
Biotecnologia
61
topic Sporadic Alzheimer's Disease
Association study
Doença de Alzheimer esporádica
rs670139
rs9349407
Estudo de associação
Alzheimer, Doença de
Marcadores biológicos
Biotecnologia
Biotecnologia
61
description Alzheimer's disease (AD) is one of the most common types of dementia. It has pathological changes, such as amyloid plaques and neurofibrillary tangles. In 98% of the cases, AD is sporadic or late-onset AD (LOAD) and presents a multifactorial characteristic. Variants rs670139 in MS4A4E gene and rs9349407 in CD2AP gene were considered associated with the risk in LOAD in studies with Genome wide association studies. The clinical diagnosis of AD is difficult and is only possible when the disease is already in advanced stages, so the studies are seeking to find biomarkers to help diagnose the disease in the early stages. Thus, in recent years, several case-control studies have been published investigating the association of rs670139 MS4A4E gene and rs9349407 CD2AP gene with LOAD in other populations. Thus, this study aimed to investigate the association between rs670139 MS4A4E and rs9349407 CD2AP with LOAD in a sample of individuals from Grande Vitória, ES and conduct an updated meta-analysis study on the association of these variants with the disease. The study performed was an association study with 221 individuals not consanguineous, including 139 individuals without Dementia matched by sex and age and 82 patients with diagnosis of probable LOAD. It was performed Polymerase Chain Reaction – Restriction Fragment Length Polymorphism for genotyping. As statistical analysis, it was performed Chi-square test, Odds ratio (Confidential interval of 95%), Mann-Whitney and Logistic regression at SPSS software. It was considered p significance with value < 0.05. It was also calculated the Hardy-Weinberg Equilibrium for each group. The genotype results were validated by sequencing in 5% of the samples. In the meta-analysis, the allelic comparison by additive genetic model was performed by R Program. The results obtained in this study suggest that the A allele of rs670139 MS4A4E is associated with risk in LOAD in meta-analysis. This result supports a role of risk of rs670139, since this SNP in functional studies has been correlated with increased amyloid plaques. However, there is no association of rs670139 MS4A4E and rs9349407 CD2AP polymorphisms with LOAD in the population of Grande Vitória, ES and the meta-analysis there is no association of rs9349407 CD2AP polymorphisms with LOAD. The results of this work are important to help validate the role of genetic variants on the risk for LOAD.
publishDate 2018
dc.date.none.fl_str_mv 2018-08-01T21:35:03Z
2018-08-01
2018-08-01T21:35:03Z
2018-02-26
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://repositorio.ufes.br/handle/10/7115
url http://repositorio.ufes.br/handle/10/7115
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv Text
application/pdf
dc.publisher.none.fl_str_mv Universidade Federal do Espírito Santo
BR
Mestrado em Biotecnologia
Centro de Ciências da Saúde
UFES
Programa de Pós-Graduação em Biotecnologia
publisher.none.fl_str_mv Universidade Federal do Espírito Santo
BR
Mestrado em Biotecnologia
Centro de Ciências da Saúde
UFES
Programa de Pós-Graduação em Biotecnologia
dc.source.none.fl_str_mv reponame:Repositório Institucional da Universidade Federal do Espírito Santo (riUfes)
instname:Universidade Federal do Espírito Santo (UFES)
instacron:UFES
instname_str Universidade Federal do Espírito Santo (UFES)
instacron_str UFES
institution UFES
reponame_str Repositório Institucional da Universidade Federal do Espírito Santo (riUfes)
collection Repositório Institucional da Universidade Federal do Espírito Santo (riUfes)
repository.name.fl_str_mv Repositório Institucional da Universidade Federal do Espírito Santo (riUfes) - Universidade Federal do Espírito Santo (UFES)
repository.mail.fl_str_mv riufes@ufes.br
_version_ 1834479038425464832