Conservação filogenética de interações em redes antagonistas bipartidas

Detalhes bibliográficos
Ano de defesa: 2017
Autor(a) principal: Bergamini, Leonardo Lima lattes
Orientador(a): Almeida-Neto, Mário lattes
Banca de defesa: Melo, Adriano Sanches, Cianciaruso, Marcus Vinícius, Andreazzi, Cecília, Carvalheiro, Luísa Gigante, Almeida-Neto, Mário
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Goiás
Programa de Pós-Graduação: Programa de Pós-graduação em Ecologia e Evolução (ICB)
Departamento: Instituto de Ciências Biológicas - ICB (RG)
País: Brasil
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://repositorio.bc.ufg.br/tede/handle/tede/7569
Resumo: This thesis comprises three chapters presented in the form of scientific articles, and approaches phylogenetic conservatism of ecological interactions under different aspects. Citations and bibliographic references are formatted in accordance with the norms from the journal Oikos, where a version of the first chapter was published. Supplementary materials cited in the text can be found in the anexes at the end of the thesis. I begin with the text from my qualification exam, that gives a brief overview about community phylogenetics. By presenting this more general literature, this introduction gives a point of view that complements the specific discussions of each chapter. In the first chapter, my coauthors and I explore the correlation between phylogenetic similarity and the similarity between counterpart sets of plants and herbivores in a regional Asteraceae-flowerhead endophages. By using different measures of counterpart similarity and different subsets defined by herbivore lineages I tried to detect how the evolutionary history of plants and herbivores is reflected in their interactions, both at the specific level as at the modular structure of the network. We show that, beyond the compositional similarity previously reported, closely related species also share a greater proportion of the phylogenetic history of their partners, both for resources and consumers. The comparison between patterns found in the entire network with those found in the subsets provides evidence that resource sharing happens mainly at deeper phylogenetic levels, so that phylogenetic sinal is detectable even among closely related consumers. Asymmetry in signal strength between trophic levels is more evident in the way how network modules reflect host plant phylogeny, both in the entire network and the sub-networks. Taken together, these results show that evolutionary processes, such as phylogenetic conservatism and independent colonization history may be the main forces behind phylogenetic structure observed in this particular plant-herbivore system. In the second chapter, I test with more detail the relative contributions of different ecological processes and the evolutionary history in the formation of the Asteraceae-Tephritidae interaction network. By uniting a previously used approach with a coevolutionary analysis method and some new methods proposed in this work I have shown the striking effect of phylogeny in this system and discuss how the patterns in this antagonistic network differ from other systems. In the third chapter I used a data set compiled from the cophylogeny literature to test the generality of the phylogenetic conservatism observed in other systems. I used a meta-analytical approach to estimate overall effect sizes for the correlations between phylogeny and interactions, as well as the asymmetry in signal strength. I have found a general pattern of phylogenetic conservatism in interaction patterns for both trophic levels along with considerable between-study heterogeneity. On the other hand, the asymmetry in signal strength was consistently small and non-significant in each individual study, with a positive albeit small overall effect size. My results provide compelling evidence that phylogenetic consevatism of ecological interactions is common in nature, togheter with a quantitave picture of its heterogeneity and of the asymmetry between trophic levels. Taken togheter, the results from the three chapters highlight the important role of specialization in structuring antagonistic interactions and the striking presence of phylogenetic constraints in the establishment of this interactions. I hope that the contributions presented here, the questions they raise, and the new approaches I have used help to improve our understanding of the processes that mediate the formation of ecological networks.
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spelling Almeida-Neto, Máriohttp://lattes.cnpq.br/1000297113793647Melo, Adriano SanchesCianciaruso, Marcus ViníciusAndreazzi, CecíliaCarvalheiro, Luísa GiganteAlmeida-Neto, Máriohttp://lattes.cnpq.br/7657432431796954Bergamini, Leonardo Lima2017-07-10T14:40:03Z2017-05-26BERGAMINI, L. L. Conservação filogenética de interações em redes antagonistas bipartidas. 2017. 136 f. Tese (Doutorado em Ecologia e Evolução) - Universidade Federal de Goiás, Goiânia, 2017.http://repositorio.bc.ufg.br/tede/handle/tede/7569This thesis comprises three chapters presented in the form of scientific articles, and approaches phylogenetic conservatism of ecological interactions under different aspects. Citations and bibliographic references are formatted in accordance with the norms from the journal Oikos, where a version of the first chapter was published. Supplementary materials cited in the text can be found in the anexes at the end of the thesis. I begin with the text from my qualification exam, that gives a brief overview about community phylogenetics. By presenting this more general literature, this introduction gives a point of view that complements the specific discussions of each chapter. In the first chapter, my coauthors and I explore the correlation between phylogenetic similarity and the similarity between counterpart sets of plants and herbivores in a regional Asteraceae-flowerhead endophages. By using different measures of counterpart similarity and different subsets defined by herbivore lineages I tried to detect how the evolutionary history of plants and herbivores is reflected in their interactions, both at the specific level as at the modular structure of the network. We show that, beyond the compositional similarity previously reported, closely related species also share a greater proportion of the phylogenetic history of their partners, both for resources and consumers. The comparison between patterns found in the entire network with those found in the subsets provides evidence that resource sharing happens mainly at deeper phylogenetic levels, so that phylogenetic sinal is detectable even among closely related consumers. Asymmetry in signal strength between trophic levels is more evident in the way how network modules reflect host plant phylogeny, both in the entire network and the sub-networks. Taken together, these results show that evolutionary processes, such as phylogenetic conservatism and independent colonization history may be the main forces behind phylogenetic structure observed in this particular plant-herbivore system. In the second chapter, I test with more detail the relative contributions of different ecological processes and the evolutionary history in the formation of the Asteraceae-Tephritidae interaction network. By uniting a previously used approach with a coevolutionary analysis method and some new methods proposed in this work I have shown the striking effect of phylogeny in this system and discuss how the patterns in this antagonistic network differ from other systems. In the third chapter I used a data set compiled from the cophylogeny literature to test the generality of the phylogenetic conservatism observed in other systems. I used a meta-analytical approach to estimate overall effect sizes for the correlations between phylogeny and interactions, as well as the asymmetry in signal strength. I have found a general pattern of phylogenetic conservatism in interaction patterns for both trophic levels along with considerable between-study heterogeneity. On the other hand, the asymmetry in signal strength was consistently small and non-significant in each individual study, with a positive albeit small overall effect size. My results provide compelling evidence that phylogenetic consevatism of ecological interactions is common in nature, togheter with a quantitave picture of its heterogeneity and of the asymmetry between trophic levels. Taken togheter, the results from the three chapters highlight the important role of specialization in structuring antagonistic interactions and the striking presence of phylogenetic constraints in the establishment of this interactions. I hope that the contributions presented here, the questions they raise, and the new approaches I have used help to improve our understanding of the processes that mediate the formation of ecological networks.Esta tese é composta de três capítulos apresentados em formato de artigos científicos, e aborda a conservação filogenética de interações ecológicas sob diferentes aspectos. Os três capítulos são apresentados em formato de artigos científicos. Citações e referências bibliográficas em todo o texto estão formatados de acordo as normas da revista Oikos, na qual uma versão do primeiro capítulo já se encontra publicado. Os materiais suplementares referidos nos textos de cada um dos capítulos se encontram nos anexos ao final da tese. Começo com o texto de meu exame de qualificação, que faz uma breve apresentação sobre filogenética de comunidades. Ao abordar este tema mais geral esta introdução fornece uma visão complementar à literatura específica apresentada em cada um dos capítulos. No primeiro capítulo, meus coautores e eu exploramos a correlação entre similaridade filogenética e similaridade no conjunto de antagonistas nas plantas e nos herbívoros em uma rede regional Asteraceae endófagos de capítulos. Usando diferentes medidas para similaridade de antagonistas e diferentes recortes definidos por linhagens de herbívoros tentei detectar como a história evolutiva das espécies de plantas e espécies se reflete em suas interações tanto ao nível específico quanto nos módulos da rede. Nós mostramos que, além da similaridade composicional previamente reportada em outros estudos, espécies aparentadas também compartilham uma maior proporção da história filogenética de seus pares, tanto para as espécies recurso quanto para seus consumidores. A comparação entre os padrões encontrados para a rede como um todo com aqueles encontrados em sub-redes compostas de grupos mais filogeneticamente restritos de herbívoros fornece evidência de que a partição de recursos ocorre em maior parte em níveis filogenéticos mais profundos, de modo que um sinal filogenético positivo na similaridade de hospedeiras é detectável mesmo entre consumidores muito próximos em sub-redes monofiléticas. A assimetria na força do sinal entre níveis tróficos é mais aparente na maneira com que os módulos da rede refletem a filogenia das espécies hospedeiras, tanto para a rede como um todo quanto para as sub-redes. Tomados em conjunto, estes resultados sugerem que processos evolutivos, como conservantismo filogenético e a história de colonizações independentes dos diferentes grupos de insetos devem ser as principais forças gerando a estrutura filogenética observada neste sistema planta-herbívoro em particular. No segundo capítulo testo mais detalhadamente as contribuições relativas de diferentes processos ecológicos e da história evolutiva na formação da rede de interações Asteraceae-Tephritidae. Unindo uma abordagem estatística previamente utilizada na literatura de redes mutualísticas, um método de análise coevolutiva e alguns novos métodos propostos neste trabalho mostrei o efeito marcante da filogenia neste sistema e discuti como os padrões desta rede de antagonistas diferem de outros sistemas. No terceiro capítulo utilizei um conjunto de dados compilado da bibliografia sobre cofilogenia para testar a generalidade do padrão de conservação filogenética e da assimetria na força dessa conservação observados em outros sistemas. Usei uma abordagem meta-analítica para estimar tamanhos de efeito gerais para as correlações entre filogenia e interações e também para as assimetrias nessas correlações. Encontrei um padrão geral de conservação filogenética nos padrões de interação para ambos níveis tróficos com uma considerável heterogeneidade entre estudos. Por outro lado, a assimetria na força do sinal foi consistentemente pequena e não significativa em cada estudo individual, com um efeito geral positivo mas também pequenoMeus resultados fornecem evidências convincentes de que a conservação de interações ecológicas é comum na natureza, juntamente com uma representação quantitativa de sua heterogeneidade e da assimetria entre níveis tróficos. Tomados em conjunto, os resultados dos três trabalhos ressaltam a importância da especialização para a estrutura das interações antagonistas e a presença marcante de restrições filogenéticas no estabelecimento destas interações. Espero que as contribuições apresentadas aqui, as questões que elas levantam, e as novas abordagens que utilizei ajudem a melhorar nossa compreensão dos processos que modulam a formação de redes ecológicas.Submitted by Erika Demachki (erikademachki@gmail.com) on 2017-07-07T17:00:54Z No. of bitstreams: 2 Tese - Leonardo Lima Bergamini - 2017.pdf: 3505106 bytes, checksum: 536ed882cdb2712abf63490a466f1a9e (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2017-07-10T14:40:03Z (GMT) No. of bitstreams: 2 Tese - Leonardo Lima Bergamini - 2017.pdf: 3505106 bytes, checksum: 536ed882cdb2712abf63490a466f1a9e (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2017-07-10T14:40:03Z (GMT). No. of bitstreams: 2 Tese - Leonardo Lima Bergamini - 2017.pdf: 3505106 bytes, checksum: 536ed882cdb2712abf63490a466f1a9e (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2017-05-26Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Ecologia e Evolução (ICB)UFGBrasilInstituto de Ciências Biológicas - ICB (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessRedes ecológicasInterações antagonistasSinal filogenéticoHerbivoriaParasitismoEcological networksAntagonistic interactionsPhylogenetic signalHerbivoryParasitismCIENCIAS BIOLOGICAS::ECOLOGIAConservação filogenética de interações em redes antagonistas bipartidasPhylogenetic conservatism of interactions in antagonistic bipartite networksinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis-5361682850774351271600600600600-387277211782737340432634996052953650022075167498588264571reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; 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dc.title.eng.fl_str_mv Conservação filogenética de interações em redes antagonistas bipartidas
dc.title.alternative.eng.fl_str_mv Phylogenetic conservatism of interactions in antagonistic bipartite networks
title Conservação filogenética de interações em redes antagonistas bipartidas
spellingShingle Conservação filogenética de interações em redes antagonistas bipartidas
Bergamini, Leonardo Lima
Redes ecológicas
Interações antagonistas
Sinal filogenético
Herbivoria
Parasitismo
Ecological networks
Antagonistic interactions
Phylogenetic signal
Herbivory
Parasitism
CIENCIAS BIOLOGICAS::ECOLOGIA
title_short Conservação filogenética de interações em redes antagonistas bipartidas
title_full Conservação filogenética de interações em redes antagonistas bipartidas
title_fullStr Conservação filogenética de interações em redes antagonistas bipartidas
title_full_unstemmed Conservação filogenética de interações em redes antagonistas bipartidas
title_sort Conservação filogenética de interações em redes antagonistas bipartidas
author Bergamini, Leonardo Lima
author_facet Bergamini, Leonardo Lima
author_role author
dc.contributor.advisor1.fl_str_mv Almeida-Neto, Mário
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/1000297113793647
dc.contributor.referee1.fl_str_mv Melo, Adriano Sanches
dc.contributor.referee2.fl_str_mv Cianciaruso, Marcus Vinícius
dc.contributor.referee3.fl_str_mv Andreazzi, Cecília
dc.contributor.referee4.fl_str_mv Carvalheiro, Luísa Gigante
dc.contributor.referee5.fl_str_mv Almeida-Neto, Mário
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/7657432431796954
dc.contributor.author.fl_str_mv Bergamini, Leonardo Lima
contributor_str_mv Almeida-Neto, Mário
Melo, Adriano Sanches
Cianciaruso, Marcus Vinícius
Andreazzi, Cecília
Carvalheiro, Luísa Gigante
Almeida-Neto, Mário
dc.subject.por.fl_str_mv Redes ecológicas
Interações antagonistas
Sinal filogenético
Herbivoria
Parasitismo
topic Redes ecológicas
Interações antagonistas
Sinal filogenético
Herbivoria
Parasitismo
Ecological networks
Antagonistic interactions
Phylogenetic signal
Herbivory
Parasitism
CIENCIAS BIOLOGICAS::ECOLOGIA
dc.subject.eng.fl_str_mv Ecological networks
Antagonistic interactions
Phylogenetic signal
Herbivory
Parasitism
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::ECOLOGIA
description This thesis comprises three chapters presented in the form of scientific articles, and approaches phylogenetic conservatism of ecological interactions under different aspects. Citations and bibliographic references are formatted in accordance with the norms from the journal Oikos, where a version of the first chapter was published. Supplementary materials cited in the text can be found in the anexes at the end of the thesis. I begin with the text from my qualification exam, that gives a brief overview about community phylogenetics. By presenting this more general literature, this introduction gives a point of view that complements the specific discussions of each chapter. In the first chapter, my coauthors and I explore the correlation between phylogenetic similarity and the similarity between counterpart sets of plants and herbivores in a regional Asteraceae-flowerhead endophages. By using different measures of counterpart similarity and different subsets defined by herbivore lineages I tried to detect how the evolutionary history of plants and herbivores is reflected in their interactions, both at the specific level as at the modular structure of the network. We show that, beyond the compositional similarity previously reported, closely related species also share a greater proportion of the phylogenetic history of their partners, both for resources and consumers. The comparison between patterns found in the entire network with those found in the subsets provides evidence that resource sharing happens mainly at deeper phylogenetic levels, so that phylogenetic sinal is detectable even among closely related consumers. Asymmetry in signal strength between trophic levels is more evident in the way how network modules reflect host plant phylogeny, both in the entire network and the sub-networks. Taken together, these results show that evolutionary processes, such as phylogenetic conservatism and independent colonization history may be the main forces behind phylogenetic structure observed in this particular plant-herbivore system. In the second chapter, I test with more detail the relative contributions of different ecological processes and the evolutionary history in the formation of the Asteraceae-Tephritidae interaction network. By uniting a previously used approach with a coevolutionary analysis method and some new methods proposed in this work I have shown the striking effect of phylogeny in this system and discuss how the patterns in this antagonistic network differ from other systems. In the third chapter I used a data set compiled from the cophylogeny literature to test the generality of the phylogenetic conservatism observed in other systems. I used a meta-analytical approach to estimate overall effect sizes for the correlations between phylogeny and interactions, as well as the asymmetry in signal strength. I have found a general pattern of phylogenetic conservatism in interaction patterns for both trophic levels along with considerable between-study heterogeneity. On the other hand, the asymmetry in signal strength was consistently small and non-significant in each individual study, with a positive albeit small overall effect size. My results provide compelling evidence that phylogenetic consevatism of ecological interactions is common in nature, togheter with a quantitave picture of its heterogeneity and of the asymmetry between trophic levels. Taken togheter, the results from the three chapters highlight the important role of specialization in structuring antagonistic interactions and the striking presence of phylogenetic constraints in the establishment of this interactions. I hope that the contributions presented here, the questions they raise, and the new approaches I have used help to improve our understanding of the processes that mediate the formation of ecological networks.
publishDate 2017
dc.date.accessioned.fl_str_mv 2017-07-10T14:40:03Z
dc.date.issued.fl_str_mv 2017-05-26
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
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dc.identifier.citation.fl_str_mv BERGAMINI, L. L. Conservação filogenética de interações em redes antagonistas bipartidas. 2017. 136 f. Tese (Doutorado em Ecologia e Evolução) - Universidade Federal de Goiás, Goiânia, 2017.
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identifier_str_mv BERGAMINI, L. L. Conservação filogenética de interações em redes antagonistas bipartidas. 2017. 136 f. Tese (Doutorado em Ecologia e Evolução) - Universidade Federal de Goiás, Goiânia, 2017.
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