Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no Brasil

Detalhes bibliográficos
Ano de defesa: 2024
Autor(a) principal: Barbara Regina Neves Chaves
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Minas Gerais
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: https://hdl.handle.net/1843/80141
Resumo: Systematics and taxonomy are essential for biological classification, but they face limitations when using only morphological characters, especially in Neotropical ecosystems, which host rich biodiversity, are highly threatened, and are under-sampled, leading to the extinction of many species before they are described. Molecular techniques, such as metabarcoding, provide rapid and accurate identifications without the need for prior morphological knowledge. Metabarcoding identifies species from short DNA fragments released by organisms into the environment. Its efficiency is similar to or greater than that of camera traps, which, although useful in mammal surveys, fail to identify small or arboreal species. Hematophagous and saprophagous dipterans have a high dispersal capacity and can locate elusive mammals in tropical environments, with their collection being more efficient through flight interception traps. The iDNA metabarcoding approach allows the identification of mammal DNA molecules from the intestinal contents of these insects. Since metabarcoding does not have a standard genetic marker, the use of multiple markers is recommended to improve taxonomic resolution. This thesis tested the effectiveness of iDNA metabarcoding in three Brazilian biomes (Amazon, Atlantic Forest, and Cerrado), adapting primers to Neotropical diversity to improve species detection, using flies from the families Calliphoridae, Sarcophagidae, and Tabanidae. This thesis highlights the importance of integrating metabarcoding into conservation and biomonitoring strategies, optimizing biodiversity analysis and supporting public policies for the preservation of Brazilian biomes.
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spelling Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no BrasiliDNA Metabarcodes for Characterization of Mammalian Diversity in BrazilZoologiaMamíferosEcossistemaCódigo de Barras de DNA Taxonômicometabarcodingidnabiomas neotropicaisconservação de mamíferosSystematics and taxonomy are essential for biological classification, but they face limitations when using only morphological characters, especially in Neotropical ecosystems, which host rich biodiversity, are highly threatened, and are under-sampled, leading to the extinction of many species before they are described. Molecular techniques, such as metabarcoding, provide rapid and accurate identifications without the need for prior morphological knowledge. Metabarcoding identifies species from short DNA fragments released by organisms into the environment. Its efficiency is similar to or greater than that of camera traps, which, although useful in mammal surveys, fail to identify small or arboreal species. Hematophagous and saprophagous dipterans have a high dispersal capacity and can locate elusive mammals in tropical environments, with their collection being more efficient through flight interception traps. The iDNA metabarcoding approach allows the identification of mammal DNA molecules from the intestinal contents of these insects. Since metabarcoding does not have a standard genetic marker, the use of multiple markers is recommended to improve taxonomic resolution. This thesis tested the effectiveness of iDNA metabarcoding in three Brazilian biomes (Amazon, Atlantic Forest, and Cerrado), adapting primers to Neotropical diversity to improve species detection, using flies from the families Calliphoridae, Sarcophagidae, and Tabanidae. This thesis highlights the importance of integrating metabarcoding into conservation and biomonitoring strategies, optimizing biodiversity analysis and supporting public policies for the preservation of Brazilian biomes.CAPES - Coordenação de Aperfeiçoamento de Pessoal de Nível SuperiorUniversidade Federal de Minas Gerais2025-02-17T16:40:00Z2025-09-08T23:39:14Z2025-02-17T16:40:00Z2024-12-19info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttps://hdl.handle.net/1843/80141porBarbara Regina Neves Chavesinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMG2025-09-08T23:39:14Zoai:repositorio.ufmg.br:1843/80141Repositório InstitucionalPUBhttps://repositorio.ufmg.br/oairepositorio@ufmg.bropendoar:2025-09-08T23:39:14Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)false
dc.title.none.fl_str_mv Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no Brasil
iDNA Metabarcodes for Characterization of Mammalian Diversity in Brazil
title Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no Brasil
spellingShingle Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no Brasil
Barbara Regina Neves Chaves
Zoologia
Mamíferos
Ecossistema
Código de Barras de DNA Taxonômico
metabarcoding
idna
biomas neotropicais
conservação de mamíferos
title_short Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no Brasil
title_full Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no Brasil
title_fullStr Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no Brasil
title_full_unstemmed Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no Brasil
title_sort Metabarcodes de iDNA para Caracterização da Diversidade de Mamíferos no Brasil
author Barbara Regina Neves Chaves
author_facet Barbara Regina Neves Chaves
author_role author
dc.contributor.author.fl_str_mv Barbara Regina Neves Chaves
dc.subject.por.fl_str_mv Zoologia
Mamíferos
Ecossistema
Código de Barras de DNA Taxonômico
metabarcoding
idna
biomas neotropicais
conservação de mamíferos
topic Zoologia
Mamíferos
Ecossistema
Código de Barras de DNA Taxonômico
metabarcoding
idna
biomas neotropicais
conservação de mamíferos
description Systematics and taxonomy are essential for biological classification, but they face limitations when using only morphological characters, especially in Neotropical ecosystems, which host rich biodiversity, are highly threatened, and are under-sampled, leading to the extinction of many species before they are described. Molecular techniques, such as metabarcoding, provide rapid and accurate identifications without the need for prior morphological knowledge. Metabarcoding identifies species from short DNA fragments released by organisms into the environment. Its efficiency is similar to or greater than that of camera traps, which, although useful in mammal surveys, fail to identify small or arboreal species. Hematophagous and saprophagous dipterans have a high dispersal capacity and can locate elusive mammals in tropical environments, with their collection being more efficient through flight interception traps. The iDNA metabarcoding approach allows the identification of mammal DNA molecules from the intestinal contents of these insects. Since metabarcoding does not have a standard genetic marker, the use of multiple markers is recommended to improve taxonomic resolution. This thesis tested the effectiveness of iDNA metabarcoding in three Brazilian biomes (Amazon, Atlantic Forest, and Cerrado), adapting primers to Neotropical diversity to improve species detection, using flies from the families Calliphoridae, Sarcophagidae, and Tabanidae. This thesis highlights the importance of integrating metabarcoding into conservation and biomonitoring strategies, optimizing biodiversity analysis and supporting public policies for the preservation of Brazilian biomes.
publishDate 2024
dc.date.none.fl_str_mv 2024-12-19
2025-02-17T16:40:00Z
2025-09-08T23:39:14Z
2025-02-17T16:40:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1843/80141
url https://hdl.handle.net/1843/80141
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language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Minas Gerais
publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMG
instname:Universidade Federal de Minas Gerais (UFMG)
instacron:UFMG
instname_str Universidade Federal de Minas Gerais (UFMG)
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institution UFMG
reponame_str Repositório Institucional da UFMG
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repository.name.fl_str_mv Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)
repository.mail.fl_str_mv repositorio@ufmg.br
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