Enigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticas

Detalhes bibliográficos
Ano de defesa: 2025
Autor(a) principal: Igor Henrique Rodrigues Oliveira
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Minas Gerais
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: https://hdl.handle.net/1843/84304
Resumo: When compared to other river basins, the number of species of the genus Psalidodon in the Upper São Francisco River basin is considerably low, with only three species formally described: Psalidodon fasciatus, Psalidodon rivularis, and Psalidodon pessalii. Two problems justify this low number. The first is due to the genus Psalidodon being reconsidered valid only in 2020 after years of disuse, with several species, mainly from Astyanax and Hyphessobrycon, being transferred to Psalidodon. The second is because P. fasciatus and P. rivularis correspond to species complexes. In the case of P. rivularis, its formalization as a species complex is recent and is supported by cytogenetic, molecular, and morphological data. In this work, we present two chapters. The first uses an integrated approach of morphological, cytogenetic, and genomic data to clarify how many species exist in the P. rivularis complex in the Upper São Francisco River. In the second, we present a new protocol for assembly and comparison in silico and in vitro of satellitomes, called “SatFisher protocol”, and we use this protocol in the quantification of different satDNAs, demonstrating their application as molecular markers in cryptic species of Astyanax and Psalidodon, and in particular, P. rivularis. Our results indicate that P. rivularis represents a species complex with at least five distinct species distributed along the Upper São Francisco River, with several cases of sympatry, and that one of these species corresponds to “Hyphessobrycon” santae, which we propose to relocate to the genus Psalidodon as Psalidodon santae comb. nov. Furthermore, our satellitome assembly and validation protocol successfully obtained quantitative markers to differentiate P. rivularis and P. fasciatus complexes species from the São Francisco and Paranaíba basins and between the genera Astyanax and Psalidodon. Our results indicate that the evolution and speciation of the P. rivularis complex are the result of several evolutionary processes together, such as chromosomal evolution, morphological adaptation, complex biogeographic processes such as vicariance, dispersion and headwaters captures, hybridism with other species, and, possibly, genomic processes not yet fully understood. We conclude by highlighting the need to conserve the small tributaries of the Upper São Francisco since they represent complex environments with rich taxonomic and genomic biodiversity and correspond to the preferred habitats of the P. rivularis group.
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spelling 2025-08-11T15:41:37Z2025-09-08T23:37:41Z2025-08-11T15:41:37Z2025-04-29https://hdl.handle.net/1843/84304When compared to other river basins, the number of species of the genus Psalidodon in the Upper São Francisco River basin is considerably low, with only three species formally described: Psalidodon fasciatus, Psalidodon rivularis, and Psalidodon pessalii. Two problems justify this low number. The first is due to the genus Psalidodon being reconsidered valid only in 2020 after years of disuse, with several species, mainly from Astyanax and Hyphessobrycon, being transferred to Psalidodon. The second is because P. fasciatus and P. rivularis correspond to species complexes. In the case of P. rivularis, its formalization as a species complex is recent and is supported by cytogenetic, molecular, and morphological data. In this work, we present two chapters. The first uses an integrated approach of morphological, cytogenetic, and genomic data to clarify how many species exist in the P. rivularis complex in the Upper São Francisco River. In the second, we present a new protocol for assembly and comparison in silico and in vitro of satellitomes, called “SatFisher protocol”, and we use this protocol in the quantification of different satDNAs, demonstrating their application as molecular markers in cryptic species of Astyanax and Psalidodon, and in particular, P. rivularis. Our results indicate that P. rivularis represents a species complex with at least five distinct species distributed along the Upper São Francisco River, with several cases of sympatry, and that one of these species corresponds to “Hyphessobrycon” santae, which we propose to relocate to the genus Psalidodon as Psalidodon santae comb. nov. Furthermore, our satellitome assembly and validation protocol successfully obtained quantitative markers to differentiate P. rivularis and P. fasciatus complexes species from the São Francisco and Paranaíba basins and between the genera Astyanax and Psalidodon. Our results indicate that the evolution and speciation of the P. rivularis complex are the result of several evolutionary processes together, such as chromosomal evolution, morphological adaptation, complex biogeographic processes such as vicariance, dispersion and headwaters captures, hybridism with other species, and, possibly, genomic processes not yet fully understood. We conclude by highlighting the need to conserve the small tributaries of the Upper São Francisco since they represent complex environments with rich taxonomic and genomic biodiversity and correspond to the preferred habitats of the P. rivularis group.CAPES - Coordenação de Aperfeiçoamento de Pessoal de Nível SuperiorporUniversidade Federal de Minas Geraisalto rio São Franciscocomplexo de espéciesHyphessobrycon santaesatDNAstaxonomia integrativaZoologiaTaxonomiaCharacidaeDNA SatéliteEnigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticasinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisIgor Henrique Rodrigues Oliveirainfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMGhttp://lattes.cnpq.br/5519402721554813Karine Frehner Kavalcohttp://lattes.cnpq.br/1620231977174004Gustavo Campos e Silva KuhnCaroline GarciaJuan Marcos MirandeJorge Abdala Dergam Dos SantosQuando comparada a outras bacias hidrográficas, o número de espécies do gênero Psalidodon na bacia do Alto rio São Francisco é consideravelmente baixo, com apenas três espécies formalmente descritas: Psalidodon fasciatus, Psalidodon rivularis e Psalidodon pessalii. Duas problemáticas justificam esse baixo número, a primeira se deve ao gênero Psalidodon ser ter sido reconsiderado válido apenas em 2020 após anos em desuso, com várias espécies, principalmente dos gêneros Astyanax e Hyphessobrycon, sendo transferidas a Psalidodon. A segunda se deve ao fato de que tanto P. fasciatus quanto P. rivularis correspondem a complexos de espécies. No caso de P. rivularis, sua formalização como complexo de espécies é recente, e é amparada por dados citogenéticos, moleculares e morfológicos. Neste trabalho, apresentamos dois capítulos, o primeiro deles usando uma abordagem integrada de dados morfológicos, citogenéticos e genômicos para esclarecer quantas espécies existem no complexo P. rivularis no Alto rio São Francisco. No segundo, apresentamos um novo protocolo para montagem e comparação in silico e in vitro de satelitomas, denominado “SatFisher protocol”, e empregamos esse protocolo na quantificação de diferentes satDNAs, demonstrando sua aplicação como marcadores moleculares em espécies crípticas de Astyanax e Psalidodon, e em especial, P. rivularis. Nossos resultados indicam que P. rivularis representa um complexo de espécies com pelo menos cinco espécies distintas distribuídas ao longo do Alto rio São Francisco, com vários casos de simpatria, e que uma dessas espécies corresponderia a “Hyphessobrycon” santae, para a qual propomos a realocação para o gênero Psalidodon como Psalidodon santae comb. nov. Além disso, nosso protocolo de montagem e validação de satelitomas conseguiu, com sucesso, obter marcadores quantitativos para diferenciar espécies dos complexos P. rivularis e P. fasciatus das bacias do São Francisco e Paranaíba, e entre os gêneros Astyanax e Psalidodon. Nossos resultados indicam que a evolução e especiação do complexo P. rivularis é fruto de vários processos evolutivos em conjunto, como evolução cromossômica, adaptação morfológica, processos biogeográficos complexos envolvendo vicariância, dispersão e captura de cabeceiras, hibridismo com outras espécies e, possivelmente, processos genômicos ainda não compreendidos totalmente. Finalizamos evidenciando a necessidade de conservação dos pequenos afluentes do Alto São Francisco, uma vez que estes representam ambientes complexos com uma rica biodiversidade taxonômica e genômica, e correspondem aos habitats preferenciais do grupo P. rivularis.BrasilICB - INSTITUTO DE CIÊNCIAS BIOLOGICASPrograma de Pós-Graduação em ZoologiaUFMGORIGINALTese_Igor_Henrique_2025_PGZoo_UFMG.pdfapplication/pdf24207837https://repositorio.ufmg.br//bitstreams/abee7b4c-4776-4032-8d11-4d9ecd6088ab/downloadd03d7af95c4db1ee6b156cd0d0369dfdMD51trueAnonymousREADLICENSElicense.txttext/plain2118https://repositorio.ufmg.br//bitstreams/15645f9f-02b4-4f65-94cd-b393997cd12a/downloadcda590c95a0b51b4d15f60c9642ca272MD52falseAnonymousREAD1843/843042025-09-08 20:37:41.678open.accessoai:repositorio.ufmg.br:1843/84304https://repositorio.ufmg.br/Repositório InstitucionalPUBhttps://repositorio.ufmg.br/oairepositorio@ufmg.bropendoar:2025-09-08T23:37:41Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)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
dc.title.none.fl_str_mv Enigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticas
title Enigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticas
spellingShingle Enigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticas
Igor Henrique Rodrigues Oliveira
Zoologia
Taxonomia
Characidae
DNA Satélite
alto rio São Francisco
complexo de espécies
Hyphessobrycon santae
satDNAs
taxonomia integrativa
title_short Enigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticas
title_full Enigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticas
title_fullStr Enigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticas
title_full_unstemmed Enigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticas
title_sort Enigma dos riachos mineiros: Psalidodon rivularis (Acestrorhamphidae: Acestrorhamphinae), um modelo no estudo de espécies crípticas
author Igor Henrique Rodrigues Oliveira
author_facet Igor Henrique Rodrigues Oliveira
author_role author
dc.contributor.author.fl_str_mv Igor Henrique Rodrigues Oliveira
dc.subject.por.fl_str_mv Zoologia
Taxonomia
Characidae
DNA Satélite
topic Zoologia
Taxonomia
Characidae
DNA Satélite
alto rio São Francisco
complexo de espécies
Hyphessobrycon santae
satDNAs
taxonomia integrativa
dc.subject.other.none.fl_str_mv alto rio São Francisco
complexo de espécies
Hyphessobrycon santae
satDNAs
taxonomia integrativa
description When compared to other river basins, the number of species of the genus Psalidodon in the Upper São Francisco River basin is considerably low, with only three species formally described: Psalidodon fasciatus, Psalidodon rivularis, and Psalidodon pessalii. Two problems justify this low number. The first is due to the genus Psalidodon being reconsidered valid only in 2020 after years of disuse, with several species, mainly from Astyanax and Hyphessobrycon, being transferred to Psalidodon. The second is because P. fasciatus and P. rivularis correspond to species complexes. In the case of P. rivularis, its formalization as a species complex is recent and is supported by cytogenetic, molecular, and morphological data. In this work, we present two chapters. The first uses an integrated approach of morphological, cytogenetic, and genomic data to clarify how many species exist in the P. rivularis complex in the Upper São Francisco River. In the second, we present a new protocol for assembly and comparison in silico and in vitro of satellitomes, called “SatFisher protocol”, and we use this protocol in the quantification of different satDNAs, demonstrating their application as molecular markers in cryptic species of Astyanax and Psalidodon, and in particular, P. rivularis. Our results indicate that P. rivularis represents a species complex with at least five distinct species distributed along the Upper São Francisco River, with several cases of sympatry, and that one of these species corresponds to “Hyphessobrycon” santae, which we propose to relocate to the genus Psalidodon as Psalidodon santae comb. nov. Furthermore, our satellitome assembly and validation protocol successfully obtained quantitative markers to differentiate P. rivularis and P. fasciatus complexes species from the São Francisco and Paranaíba basins and between the genera Astyanax and Psalidodon. Our results indicate that the evolution and speciation of the P. rivularis complex are the result of several evolutionary processes together, such as chromosomal evolution, morphological adaptation, complex biogeographic processes such as vicariance, dispersion and headwaters captures, hybridism with other species, and, possibly, genomic processes not yet fully understood. We conclude by highlighting the need to conserve the small tributaries of the Upper São Francisco since they represent complex environments with rich taxonomic and genomic biodiversity and correspond to the preferred habitats of the P. rivularis group.
publishDate 2025
dc.date.accessioned.fl_str_mv 2025-08-11T15:41:37Z
2025-09-08T23:37:41Z
dc.date.available.fl_str_mv 2025-08-11T15:41:37Z
dc.date.issued.fl_str_mv 2025-04-29
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv https://hdl.handle.net/1843/84304
url https://hdl.handle.net/1843/84304
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dc.publisher.none.fl_str_mv Universidade Federal de Minas Gerais
publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMG
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institution UFMG
reponame_str Repositório Institucional da UFMG
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