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Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzida

Detalhes bibliográficos
Ano de defesa: 2023
Autor(a) principal: Souza, Beatriz Fernandes de
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal da Paraíba
Brasil
Odontologia
Programa de Pós-Graduação em Odontologia
UFPB
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: https://repositorio.ufpb.br/jspui/handle/123456789/28836
Resumo: Chemoinduced oral mucositis is a common adverse effect of antineoplastic treatment and is characterized by an inflammatory condition that affects the mucous membranes. In addition to presenting high morbidity, the presence of severe symptoms can result in the interruption of antineoplastic therapy, affecting both the quality of life of patients and the treatment prognosis. The use of antimetabolite drugs, such as methotrexate (MTX), and individual genetic variations are considered risk factors for the onset of mucositis. Based on this, this study aimed to investigate the association between the presence of single-base genetic polymorphisms (SNPs) and the methylation profile in genes that belongs to the DNA methyltransferases (DNMTs) family with the occurrence and severity of oral mucositis in children and adolescents with hematological malignancies and treated with methotrexate, in order to verify whether this family of genes can be used as a biomarker for the onset of inflammation or exposure to MTX. The assessment of oral conditions was performed using the modified Oral Assessment Guide. Demographic, clinical, hematological and biochemical data were obtained from hospital records. The genomic DNA of the epithelial cells of the oral mucosa was used for the analysis of the polymorphisms of DNMT1 (rs2228611), DNMT3A (rs7590760) and DNMT3B (rs6087990), (n=102), through the technique of PCR-Restriction Fragment Length Polymorphism (PCR -RFLP), and to determine the DNA methylation profile (n=85), Methylation Specific PCR (PCR-MSP) was used. The sample consisted of healthy and pediatric oncopediatric patients aged between 4 and 19 years and the most common neoplasm was Acute Lymphoblastic Leukemia. Of the 102 patients, 84.3% developed oral mucositis, and of these, 53.1% had severe symptoms of the disease. The allele and genotype frequencies of SNPs did not reveal differences between patients with and without oral mucositis. Regarding the analyzes of the epigenetic profiles, an increase in the frequency of methylation for DNMT1 was detected in patients recovered from mucositis. Combined analyzes of the hematological and biochemical data with the genetic and epigenetic profiles of the patients revealed that: both the methylated profile of DNMT3A associated with the CC genotype (SNP rs7590760) and the unmethylated profile of DNMT3B associated with the CC genotype (SNP rs6087990) are associated with higher creatinine values. Thus, we conclude that the DNMT1 methylation profile is associated with the post-mucositis period and the genetic and epigenetic profiles of DNMT3A and DNMT3B are associated with creatinine levels.
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spelling Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzidaAnalysis of polymorphisms and DNA methylation in the DNMT1, DNMT3A and DNMT3B genes in pediatric oncology patients with chemo-induced oral mucositisOdontologiaPolimorfismos genéticosMetilação do DNAMucosite oralQuimioterapiaPacientes infantojuvenisDentistryGenetic polymorphismsDNA methylationOral mucositisChild and adolescent patientsCNPQ::CIENCIAS DA SAUDE::ODONTOLOGIAChemoinduced oral mucositis is a common adverse effect of antineoplastic treatment and is characterized by an inflammatory condition that affects the mucous membranes. In addition to presenting high morbidity, the presence of severe symptoms can result in the interruption of antineoplastic therapy, affecting both the quality of life of patients and the treatment prognosis. The use of antimetabolite drugs, such as methotrexate (MTX), and individual genetic variations are considered risk factors for the onset of mucositis. Based on this, this study aimed to investigate the association between the presence of single-base genetic polymorphisms (SNPs) and the methylation profile in genes that belongs to the DNA methyltransferases (DNMTs) family with the occurrence and severity of oral mucositis in children and adolescents with hematological malignancies and treated with methotrexate, in order to verify whether this family of genes can be used as a biomarker for the onset of inflammation or exposure to MTX. The assessment of oral conditions was performed using the modified Oral Assessment Guide. Demographic, clinical, hematological and biochemical data were obtained from hospital records. The genomic DNA of the epithelial cells of the oral mucosa was used for the analysis of the polymorphisms of DNMT1 (rs2228611), DNMT3A (rs7590760) and DNMT3B (rs6087990), (n=102), through the technique of PCR-Restriction Fragment Length Polymorphism (PCR -RFLP), and to determine the DNA methylation profile (n=85), Methylation Specific PCR (PCR-MSP) was used. The sample consisted of healthy and pediatric oncopediatric patients aged between 4 and 19 years and the most common neoplasm was Acute Lymphoblastic Leukemia. Of the 102 patients, 84.3% developed oral mucositis, and of these, 53.1% had severe symptoms of the disease. The allele and genotype frequencies of SNPs did not reveal differences between patients with and without oral mucositis. Regarding the analyzes of the epigenetic profiles, an increase in the frequency of methylation for DNMT1 was detected in patients recovered from mucositis. Combined analyzes of the hematological and biochemical data with the genetic and epigenetic profiles of the patients revealed that: both the methylated profile of DNMT3A associated with the CC genotype (SNP rs7590760) and the unmethylated profile of DNMT3B associated with the CC genotype (SNP rs6087990) are associated with higher creatinine values. Thus, we conclude that the DNMT1 methylation profile is associated with the post-mucositis period and the genetic and epigenetic profiles of DNMT3A and DNMT3B are associated with creatinine levels.Conselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPqCoordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESFundação de Apoio à Pesquisa do Estado da Paraíba - FAPESQA mucosite oral quimioinduzida é um efeito adverso comum do tratamento antineoplásico e é caracterizada por uma condição inflamatória que afeta as mucosas. Além de apresentar alta morbidade, a presença de sintomas mais graves pode resultar em suspensão da terapia antineoplásica, afetando tanto a qualidade de vida dos pacientes quanto o prognóstico do tratamento. O uso de fármacos antimetabólitos, como o metotrexato (MTX), e variações genéticas individuais são considerados fatores de risco para o surgimento da mucosite. Nesse sentido, o objetivo deste trabalho foi investigar a associação entre a presença de polimorfismos genéticos de base única (SNPs) e o perfil de metilação em genes que compõem a família das DNA metiltransferases (DNMTs) com a ocorrência e severidade da mucosite oral pacientes infanto-juvenis portadores de neoplasias hematológicas e tratados com metotrexato, a fim de determinar se essa família de genes pode ser utilizada como biomarcador para o surgimento da inflamação ou exposição ao MTX. A avaliação das condições orais foi realizada por meio do Oral Assessement Guide modificado. Os dados demográficos, clínicos, hematológicos e bioquímicos foram obtidos a partir dos prontuários hospitalares. O DNA genômico das células epiteliais da mucosa oral foi utilizado para a análise dos polimorfismos de DNMT1 (rs2228611), DNMT3A (rs7590760) e DNMT3B (rs6087990), (n=102), através da técnica de PCR-Restriction Fragment Length Polymorphism (PCR-RFLP), e para a determinação do perfil de metilação do DNA (n=85), foi utilizada a Methylation Specific PCR (PCR-MSP). A amostra foi composta por pacientes saudáveis e oncopediátricos com idade entre 4 e 19 anos e a neoplasia mais comum foi a Leucemia Linfoblástica Aguda. Dos 102 pacientes, 84,3% desenvolveram a mucosite oral, e desses, 53,1% apresentaram os sintomas mais severos da doença. As frequências alélicas e genotípicas dos SNPs não revelaram diferenças entre pacientes com ou sem mucosite oral. Já em relação às análises dos perfis epigenéticos, foi detectado um aumento na frequência de metilação para DNMT1 em pacientes recuperados da mucosite. Análises combinadas entre os dados hematológicos e bioquímicos com os perfis genéticos e epigenéticos dos pacientes revelaram que: tanto o perfil metilado de DNMT3A associado ao genótipo CC (SNP rs7590760) quanto o perfil não-metilado de DNMT3B associado ao genótipo CC (SNP rs6087990) estão associados a valores mais elevados de creatinina. Dessa forma, concluímos que o perfil de metilação de DNMT1 está associado ao período pós-mucosite e os perfis genéticos e epigenéticos de DNMT3A e DNMT3B estão associados com os níveis de creatinina.Universidade Federal da ParaíbaBrasilOdontologiaPrograma de Pós-Graduação em OdontologiaUFPBOliveira, Naila Francis Paulo dehttp://lattes.cnpq.br/5659529393550374Souza, Beatriz Fernandes de2023-10-24T11:50:27Z2023-05-022023-10-24T11:50:27Z2023-03-30info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesishttps://repositorio.ufpb.br/jspui/handle/123456789/28836porAttribution-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nd/3.0/br/info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UFPBinstname:Universidade Federal da Paraíba (UFPB)instacron:UFPB2023-10-25T06:06:02Zoai:repositorio.ufpb.br:123456789/28836Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufpb.br/PUBhttp://tede.biblioteca.ufpb.br:8080/oai/requestdiretoria@ufpb.br|| bdtd@biblioteca.ufpb.bropendoar:2023-10-25T06:06:02Biblioteca Digital de Teses e Dissertações da UFPB - Universidade Federal da Paraíba (UFPB)false
dc.title.none.fl_str_mv Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzida
Analysis of polymorphisms and DNA methylation in the DNMT1, DNMT3A and DNMT3B genes in pediatric oncology patients with chemo-induced oral mucositis
title Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzida
spellingShingle Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzida
Souza, Beatriz Fernandes de
Odontologia
Polimorfismos genéticos
Metilação do DNA
Mucosite oral
Quimioterapia
Pacientes infantojuvenis
Dentistry
Genetic polymorphisms
DNA methylation
Oral mucositis
Child and adolescent patients
CNPQ::CIENCIAS DA SAUDE::ODONTOLOGIA
title_short Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzida
title_full Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzida
title_fullStr Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzida
title_full_unstemmed Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzida
title_sort Análise de polimorfismos e metilação de DNA nos genes DNMT1, DNMT3A e DNMT3B em pacientes oncopediátricos com mucosite oral quimioinduzida
author Souza, Beatriz Fernandes de
author_facet Souza, Beatriz Fernandes de
author_role author
dc.contributor.none.fl_str_mv Oliveira, Naila Francis Paulo de
http://lattes.cnpq.br/5659529393550374
dc.contributor.author.fl_str_mv Souza, Beatriz Fernandes de
dc.subject.por.fl_str_mv Odontologia
Polimorfismos genéticos
Metilação do DNA
Mucosite oral
Quimioterapia
Pacientes infantojuvenis
Dentistry
Genetic polymorphisms
DNA methylation
Oral mucositis
Child and adolescent patients
CNPQ::CIENCIAS DA SAUDE::ODONTOLOGIA
topic Odontologia
Polimorfismos genéticos
Metilação do DNA
Mucosite oral
Quimioterapia
Pacientes infantojuvenis
Dentistry
Genetic polymorphisms
DNA methylation
Oral mucositis
Child and adolescent patients
CNPQ::CIENCIAS DA SAUDE::ODONTOLOGIA
description Chemoinduced oral mucositis is a common adverse effect of antineoplastic treatment and is characterized by an inflammatory condition that affects the mucous membranes. In addition to presenting high morbidity, the presence of severe symptoms can result in the interruption of antineoplastic therapy, affecting both the quality of life of patients and the treatment prognosis. The use of antimetabolite drugs, such as methotrexate (MTX), and individual genetic variations are considered risk factors for the onset of mucositis. Based on this, this study aimed to investigate the association between the presence of single-base genetic polymorphisms (SNPs) and the methylation profile in genes that belongs to the DNA methyltransferases (DNMTs) family with the occurrence and severity of oral mucositis in children and adolescents with hematological malignancies and treated with methotrexate, in order to verify whether this family of genes can be used as a biomarker for the onset of inflammation or exposure to MTX. The assessment of oral conditions was performed using the modified Oral Assessment Guide. Demographic, clinical, hematological and biochemical data were obtained from hospital records. The genomic DNA of the epithelial cells of the oral mucosa was used for the analysis of the polymorphisms of DNMT1 (rs2228611), DNMT3A (rs7590760) and DNMT3B (rs6087990), (n=102), through the technique of PCR-Restriction Fragment Length Polymorphism (PCR -RFLP), and to determine the DNA methylation profile (n=85), Methylation Specific PCR (PCR-MSP) was used. The sample consisted of healthy and pediatric oncopediatric patients aged between 4 and 19 years and the most common neoplasm was Acute Lymphoblastic Leukemia. Of the 102 patients, 84.3% developed oral mucositis, and of these, 53.1% had severe symptoms of the disease. The allele and genotype frequencies of SNPs did not reveal differences between patients with and without oral mucositis. Regarding the analyzes of the epigenetic profiles, an increase in the frequency of methylation for DNMT1 was detected in patients recovered from mucositis. Combined analyzes of the hematological and biochemical data with the genetic and epigenetic profiles of the patients revealed that: both the methylated profile of DNMT3A associated with the CC genotype (SNP rs7590760) and the unmethylated profile of DNMT3B associated with the CC genotype (SNP rs6087990) are associated with higher creatinine values. Thus, we conclude that the DNMT1 methylation profile is associated with the post-mucositis period and the genetic and epigenetic profiles of DNMT3A and DNMT3B are associated with creatinine levels.
publishDate 2023
dc.date.none.fl_str_mv 2023-10-24T11:50:27Z
2023-05-02
2023-10-24T11:50:27Z
2023-03-30
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.ufpb.br/jspui/handle/123456789/28836
url https://repositorio.ufpb.br/jspui/handle/123456789/28836
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv Attribution-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Universidade Federal da Paraíba
Brasil
Odontologia
Programa de Pós-Graduação em Odontologia
UFPB
publisher.none.fl_str_mv Universidade Federal da Paraíba
Brasil
Odontologia
Programa de Pós-Graduação em Odontologia
UFPB
dc.source.none.fl_str_mv reponame:Biblioteca Digital de Teses e Dissertações da UFPB
instname:Universidade Federal da Paraíba (UFPB)
instacron:UFPB
instname_str Universidade Federal da Paraíba (UFPB)
instacron_str UFPB
institution UFPB
reponame_str Biblioteca Digital de Teses e Dissertações da UFPB
collection Biblioteca Digital de Teses e Dissertações da UFPB
repository.name.fl_str_mv Biblioteca Digital de Teses e Dissertações da UFPB - Universidade Federal da Paraíba (UFPB)
repository.mail.fl_str_mv diretoria@ufpb.br|| bdtd@biblioteca.ufpb.br
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