Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitro

Detalhes bibliográficos
Ano de defesa: 2012
Autor(a) principal: Lugokenski, Thiago Henrique
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
dARK ID: ark:/26339/0013000001x3b
Idioma: por
Instituição de defesa: Universidade Federal de Santa Maria
BR
Bioquímica
UFSM
Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: http://repositorio.ufsm.br/handle/1/4457
Resumo: The enzyme acetylcholinesterase (EC 3.1.1.7, AChE) is responsible to terminate acetylcholine activity in the terminal nervous junctions with its effector organs or post-synaptic sites. The activity of this enzyme could be inhibited by organophosphorus (OP) compounds, and this inactivation leads to an accumulation of acetylcholine in the cholinergic receptors, leading to a cholinergic crisis that may result in death. In this way, the OP compound methamidophos has been related to its broad use in various agriculture cultures in Brazil, with high intoxication rate. Actually, the only compounds able to revert the AChE inhibition by OP, are the oxime, such compounds may reactive the enzyme activity due its high nuclephilic power, attacking the phosphoryl group of the inhibited enzyme and displacing it. However, such compounds show toxic effects, and its use is limited by the high specificity, with each oxime acting only in the reactivation of AChE induced by specific OP coumponds. These limitations raise the need of development of new compounds with AChE reactivator potency, with minor side effects. In this way, have been utilized a series of computational tools (in silico models), with the aim of understand the interaction occurring at a molecular level and, so, rationalize the new compounds development. Thus, the aim of this thesis is to evaluate the activity of three new compounds in reactivate the AChE inhibited by methamidophos, in comparison with two others oximes used in clinical (obidoxime and pralidoxime), both in in silico and in vitro models. Our work demonstrate that the newly synthesized compounds are able to reactivate human erythrocyte AChE, however less efficiently than pralidoxime and obidoxime, and reactivate human plasma butyrylcholinesterase (BChE), where the classical oximes failed. We also show that pralidoxime, which obtained the best reactivation constant among all tested compounds, attack the phosphorus-oxygen moiety (formed between the methamidophos and the AChE catalytic triad residue Ser203) via a region known as oxyanion-hole , composed by the residues Gly120, Gly121 and Ala204. Such found may help in the development of new compounds with better reactivatory activity on AChE inhibited by OP compounds. Furthermore, we show for the first time the individual contribution of each amino acid of AChE, in a radii of 14 Å from the ligand, to the oxime bonding to its active site, using quantum chemistry methods. Here, we demonstrate the important of a quaternary nitrogen to the stabilization of the oximes into the active site; as well as, we obtained evidences that the active form of oximes should be the unprotonated one, instead the protonated, which has been target of debate in the scientific society. Particularly important, we show the critical contribution of amino acids that lies distant from the ligand to the adopted conformation and stabilization of the compounds into the active site of AChE, which has been neglected until far. Finally, our study also evaluates the toxic effects of the compound isatin-3-N4-benzilthiosemicarbazone (IBTC) in mice, which presented low toxicity, with median lethal dose superior at 500 mg/kg. Concluding, this study contributes significantly to the development of new drugs able to restore the AChE activity with minor toxic effects.
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spelling Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitroEvaluation of new compounds on cholinesterases activity in models in silico and in vitroAcetilcolinesteraseOrganofosforadosMetamidofósOximasModelos computacionaisAcetylcholinesteraseOrganophosphorusMethamidophosOximesComputational modelsCNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICAThe enzyme acetylcholinesterase (EC 3.1.1.7, AChE) is responsible to terminate acetylcholine activity in the terminal nervous junctions with its effector organs or post-synaptic sites. The activity of this enzyme could be inhibited by organophosphorus (OP) compounds, and this inactivation leads to an accumulation of acetylcholine in the cholinergic receptors, leading to a cholinergic crisis that may result in death. In this way, the OP compound methamidophos has been related to its broad use in various agriculture cultures in Brazil, with high intoxication rate. Actually, the only compounds able to revert the AChE inhibition by OP, are the oxime, such compounds may reactive the enzyme activity due its high nuclephilic power, attacking the phosphoryl group of the inhibited enzyme and displacing it. However, such compounds show toxic effects, and its use is limited by the high specificity, with each oxime acting only in the reactivation of AChE induced by specific OP coumponds. These limitations raise the need of development of new compounds with AChE reactivator potency, with minor side effects. In this way, have been utilized a series of computational tools (in silico models), with the aim of understand the interaction occurring at a molecular level and, so, rationalize the new compounds development. Thus, the aim of this thesis is to evaluate the activity of three new compounds in reactivate the AChE inhibited by methamidophos, in comparison with two others oximes used in clinical (obidoxime and pralidoxime), both in in silico and in vitro models. Our work demonstrate that the newly synthesized compounds are able to reactivate human erythrocyte AChE, however less efficiently than pralidoxime and obidoxime, and reactivate human plasma butyrylcholinesterase (BChE), where the classical oximes failed. We also show that pralidoxime, which obtained the best reactivation constant among all tested compounds, attack the phosphorus-oxygen moiety (formed between the methamidophos and the AChE catalytic triad residue Ser203) via a region known as oxyanion-hole , composed by the residues Gly120, Gly121 and Ala204. Such found may help in the development of new compounds with better reactivatory activity on AChE inhibited by OP compounds. Furthermore, we show for the first time the individual contribution of each amino acid of AChE, in a radii of 14 Å from the ligand, to the oxime bonding to its active site, using quantum chemistry methods. Here, we demonstrate the important of a quaternary nitrogen to the stabilization of the oximes into the active site; as well as, we obtained evidences that the active form of oximes should be the unprotonated one, instead the protonated, which has been target of debate in the scientific society. Particularly important, we show the critical contribution of amino acids that lies distant from the ligand to the adopted conformation and stabilization of the compounds into the active site of AChE, which has been neglected until far. Finally, our study also evaluates the toxic effects of the compound isatin-3-N4-benzilthiosemicarbazone (IBTC) in mice, which presented low toxicity, with median lethal dose superior at 500 mg/kg. Concluding, this study contributes significantly to the development of new drugs able to restore the AChE activity with minor toxic effects.Coordenação de Aperfeiçoamento de Pessoal de Nível SuperiorA enzima acetilcolinesterase (EC 3.1.1.7, AChE) é responsável por terminar a ação da acetilcolina nas junções das terminações nervosas com seus órgãos efetores ou sítios pós-sinaptícos. A atividade desta enzima pode ser inibida por compostos organofosforados (OP), e sua inativação resulta em um acúmulo de acetilcolina nos receptores colinérgicos, levando a crise colinérgica que pode levar a morte. No Brasil, se destaca o uso do composto OP metamidofós, que é largamente utilizado no controle de pragas em culturas agrícolas e tem sido relacionado com altas taxas de intoxicação. Atualmente, os únicos compostos capazes de reverter a inibição da AChE por OP são as oximas, tais compostos podem reativar a enzima devido a seu alto poder nucleofílico, podendo atacar e retirar o grupamento fosforil da enzima inibida. Porém, tais compostos apresentam efeitos tóxicos, e tem seu uso limitado pela alta especificidade, com cada oxima atuando na AChE inibida por apenas alguns compostos OP. Tais limitações criam a necessidade do desenvolvimento de novos fármacos com potencial reativador da AChE com menores efeitos colaterais. Neste sentido, se tem utilizado uma série de ferramentas computacionais (modelos in silico), com o objetivo de entender as interações que ocorrem em nível molecular e, desta forma, racionalizar o desenvolvimento de novos compostos. Sendo assim, o objetivo desta tese consiste em avaliar a atividade de três novos compostos, em comparação com duas oximas já utilizadas na clínica (obidoxima e pralidoxima), sobre a atividade da AChE inibida por metamidofós, tanto em modelos in silico como in vitro. Como resultados, observamos que os três novos compostos foram capazes de reativar a AChE de eritrócitos humanos inibida por metamidofós, contudo com menor eficiência que as oximas já utilizadas na clínica. Porém, todos os novos compostos foram capazes de reativar a enzima butirilcolinesterase (BChE), uma enzima acessória à AChE no sistema colinérgico, inibida por metamidofós, enquanto nenhumas das oximas clássicas tiveram qualquer atividade reativadora nesta enzima. Nosso trabalho também demonstrou que a pralidoxima, que obteve a melhor constante de reativação entre todos os compostos testados, ataca a ligação fosforo-oxigênio (formada entre o metamidofós e o resíduo Ser203, da tríade catalítica da AChE) via uma região conhecida como oxyanion-hole , que compreende os resíduos Gly120, Gly121 e Ala204. Tal achado pode ajudar no desenvolvimento de novos compostos com melhor atividade reativatória na AChE inibida por OPs. Além disso, mostramos aqui pela primeira vez, a contribuição de cada resíduo de aminoácido da AChE, num raio de 14 Å do ligante, para a ligação das oximas no seu sítio ativo, usando métodos de química quântica. Tais achados mostraram a importância da presença de um nitrogênio quaternário para a estabilização das oximas no sítio ativo; assim como colheu evidências que a forma ativa das oximas seria a sua forma desprotonada, ao invés da forma protonada, o que tem sido alvo de algum debate no meio cientifico. Particularmente importante, foi demonstrado a contribuição fundamental de aminoácidos que se encontram distantes do ligante, para a estabilização e conformação adotada pelos compostos, e que até o momento tem sido negligenciados em estudos in silico. Por fim, nosso estudo também avaliou os efeitos tóxicos do composto isatina-3-N4-benziltiosemicarbazona (IBTC) em camundongos, o qual apresentando baixa toxicidade, com valores de dose letal mediana (LD50) superiores a 500 mg/kg. Desta forma, este estudo contribui para a desenvolvimento de novos fármacos capazes de reativar a AChE e que apresentem menos efeitos tóxicos.Universidade Federal de Santa MariaBRBioquímicaUFSMPrograma de Pós-Graduação em Ciências Biológicas: Bioquímica ToxicológicaSoares, Félix Alexandre Antuneshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4769181A8Monserrat, José Maríahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4769169H6Franco, Jeferson Luishttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4705814T8Schetinger, Maria Rosa ChitolinaLoro, Vania Luciahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4796333D7Lugokenski, Thiago Henrique2013-03-042013-03-042012-06-04info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfapplication/pdfLUGOKENSKI, Thiago Henrique. EVALUATION OF NEW COMPOUNDS ON CHOLINESTERASES ACTIVITY IN MODELS IN SILICO AND IN VITRO. 2012. 107 f. Tese (Doutorado em Ciências Biológicas) - Universidade Federal de Santa Maria, Santa Maria, 2012.http://repositorio.ufsm.br/handle/1/4457ark:/26339/0013000001x3bporinfo:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2017-08-31T17:06:46Zoai:repositorio.ufsm.br:1/4457Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/PUBhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.com||manancial@ufsm.bropendoar:2017-08-31T17:06:46Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false
dc.title.none.fl_str_mv Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitro
Evaluation of new compounds on cholinesterases activity in models in silico and in vitro
title Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitro
spellingShingle Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitro
Lugokenski, Thiago Henrique
Acetilcolinesterase
Organofosforados
Metamidofós
Oximas
Modelos computacionais
Acetylcholinesterase
Organophosphorus
Methamidophos
Oximes
Computational models
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA
title_short Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitro
title_full Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitro
title_fullStr Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitro
title_full_unstemmed Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitro
title_sort Avaliação de novos compostos sobre a atividade de colinesterases em modelos in silico e in vitro
author Lugokenski, Thiago Henrique
author_facet Lugokenski, Thiago Henrique
author_role author
dc.contributor.none.fl_str_mv Soares, Félix Alexandre Antunes
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4769181A8
Monserrat, José María
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4769169H6
Franco, Jeferson Luis
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4705814T8
Schetinger, Maria Rosa Chitolina
Loro, Vania Lucia
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4796333D7
dc.contributor.author.fl_str_mv Lugokenski, Thiago Henrique
dc.subject.por.fl_str_mv Acetilcolinesterase
Organofosforados
Metamidofós
Oximas
Modelos computacionais
Acetylcholinesterase
Organophosphorus
Methamidophos
Oximes
Computational models
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA
topic Acetilcolinesterase
Organofosforados
Metamidofós
Oximas
Modelos computacionais
Acetylcholinesterase
Organophosphorus
Methamidophos
Oximes
Computational models
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA
description The enzyme acetylcholinesterase (EC 3.1.1.7, AChE) is responsible to terminate acetylcholine activity in the terminal nervous junctions with its effector organs or post-synaptic sites. The activity of this enzyme could be inhibited by organophosphorus (OP) compounds, and this inactivation leads to an accumulation of acetylcholine in the cholinergic receptors, leading to a cholinergic crisis that may result in death. In this way, the OP compound methamidophos has been related to its broad use in various agriculture cultures in Brazil, with high intoxication rate. Actually, the only compounds able to revert the AChE inhibition by OP, are the oxime, such compounds may reactive the enzyme activity due its high nuclephilic power, attacking the phosphoryl group of the inhibited enzyme and displacing it. However, such compounds show toxic effects, and its use is limited by the high specificity, with each oxime acting only in the reactivation of AChE induced by specific OP coumponds. These limitations raise the need of development of new compounds with AChE reactivator potency, with minor side effects. In this way, have been utilized a series of computational tools (in silico models), with the aim of understand the interaction occurring at a molecular level and, so, rationalize the new compounds development. Thus, the aim of this thesis is to evaluate the activity of three new compounds in reactivate the AChE inhibited by methamidophos, in comparison with two others oximes used in clinical (obidoxime and pralidoxime), both in in silico and in vitro models. Our work demonstrate that the newly synthesized compounds are able to reactivate human erythrocyte AChE, however less efficiently than pralidoxime and obidoxime, and reactivate human plasma butyrylcholinesterase (BChE), where the classical oximes failed. We also show that pralidoxime, which obtained the best reactivation constant among all tested compounds, attack the phosphorus-oxygen moiety (formed between the methamidophos and the AChE catalytic triad residue Ser203) via a region known as oxyanion-hole , composed by the residues Gly120, Gly121 and Ala204. Such found may help in the development of new compounds with better reactivatory activity on AChE inhibited by OP compounds. Furthermore, we show for the first time the individual contribution of each amino acid of AChE, in a radii of 14 Å from the ligand, to the oxime bonding to its active site, using quantum chemistry methods. Here, we demonstrate the important of a quaternary nitrogen to the stabilization of the oximes into the active site; as well as, we obtained evidences that the active form of oximes should be the unprotonated one, instead the protonated, which has been target of debate in the scientific society. Particularly important, we show the critical contribution of amino acids that lies distant from the ligand to the adopted conformation and stabilization of the compounds into the active site of AChE, which has been neglected until far. Finally, our study also evaluates the toxic effects of the compound isatin-3-N4-benzilthiosemicarbazone (IBTC) in mice, which presented low toxicity, with median lethal dose superior at 500 mg/kg. Concluding, this study contributes significantly to the development of new drugs able to restore the AChE activity with minor toxic effects.
publishDate 2012
dc.date.none.fl_str_mv 2012-06-04
2013-03-04
2013-03-04
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv LUGOKENSKI, Thiago Henrique. EVALUATION OF NEW COMPOUNDS ON CHOLINESTERASES ACTIVITY IN MODELS IN SILICO AND IN VITRO. 2012. 107 f. Tese (Doutorado em Ciências Biológicas) - Universidade Federal de Santa Maria, Santa Maria, 2012.
http://repositorio.ufsm.br/handle/1/4457
dc.identifier.dark.fl_str_mv ark:/26339/0013000001x3b
identifier_str_mv LUGOKENSKI, Thiago Henrique. EVALUATION OF NEW COMPOUNDS ON CHOLINESTERASES ACTIVITY IN MODELS IN SILICO AND IN VITRO. 2012. 107 f. Tese (Doutorado em Ciências Biológicas) - Universidade Federal de Santa Maria, Santa Maria, 2012.
ark:/26339/0013000001x3b
url http://repositorio.ufsm.br/handle/1/4457
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
BR
Bioquímica
UFSM
Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica
publisher.none.fl_str_mv Universidade Federal de Santa Maria
BR
Bioquímica
UFSM
Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica
dc.source.none.fl_str_mv reponame:Manancial - Repositório Digital da UFSM
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Manancial - Repositório Digital da UFSM
collection Manancial - Repositório Digital da UFSM
repository.name.fl_str_mv Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)
repository.mail.fl_str_mv atendimento.sib@ufsm.br||tedebc@gmail.com||manancial@ufsm.br
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