Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos

Detalhes bibliográficos
Ano de defesa: 2018
Autor(a) principal: Metz, Magda
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
dARK ID: ark:/26339/0013000011t1v
Idioma: por
Instituição de defesa: Universidade Federal de Santa Maria
Brasil
Zootecnia
UFSM
Programa de Pós-Graduação em Zootecnia
Centro de Ciências Rurais
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: http://repositorio.ufsm.br/handle/1/15738
Resumo: This study aimed at estimating genetic parameters for the characteristic egg production by means of different models. The data used, referring to the production of eggs of pure-bred Rhode Island Red (RIR) line GG, collected in the period from 1992 to 2013, provided by CNPSA EMBRAPA. In Article 1, the objective was to estimate the coefficients of heritability and correlation for partial and total egg production, as well as to verify the possibility of using a reduced rank model. Egg production was evaluated through the egg production rate, composed of 7,087 records grouped in 13 four-week periods (PO1 to PO13) between the 19th to the 70th week of life of the birds, and another 4 accumulated periods (P1 to Ptotal). For the analysis of main components, the periods from PO2 to PO11 were considered. Heritability estimates were 0.39, 0.11, 0.15 and 0.07 (P1, P2, P3 and Ptotal). Genetic correlations between the periods P1xPtotal, P2xPtotal and P3xPtotal were respectively 0.18, 0.53 and 0.99. The reduced post model adjusted for the first two main components provided the best fit. Heritability estimates for this model ranged from 0.10 to 0.26. It was concluded that the selection of birds based on the production of eggs up to the 54th week (P3) has a high genetic correlation with the total egg production, and the genetic covariance structure for posture rate can be adjusted using a reduced rank model containing two main components. The objective of this study was to compare different models of random regression (MRA) with different orders of the Legendre polynomial, in order to identify the best fit model for the RIR bird posture rate and to estimate the covariance and parameter components for this characteristic. The work file consisted of 83,687 records, and weekly productions were grouped into 13 composite periods of 4 weeks (PO1 to PO13). The proposed model included the fixed generation effect, the average production trajectory, the additive random and genetic effect, the direct and residual permanent effect. In order to model the fixed trajectory we used a polynomial of order 4 and for the random trajectories, Legendre orthogonal polynomials were used, varying the orders for the additive and permanent environment genetic effect, with homogeneous or heterogeneous residual variance. Differences between the models were compared using the AIC, BIC, LogL and LRT statistics. The model composed of polynomials of order four for fixed effect, order two for additive effect, eight for permanent environment, containing seven classes of residual variance, was the most adequate for the adjustment of egg production rate data. Heritability estimates ranged from 0.01 to 0.24 and genetic correlations between the periods ranged from -0.27 to 1.00. The selection based on the partial periods PO7 to PO10 have good estimates of heritability, are well correlated and are therefore indicated for the selection of RIR birds.
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spelling Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovosGenetic parameters for the selection of pure lines of the Rhode Island Red breedAnálise multivariadaComponentes principaisRegressão aleatóriaMultivariate analysisPrincipal componentsRandom regressionCNPQ::CIENCIAS AGRARIAS::ZOOTECNIAThis study aimed at estimating genetic parameters for the characteristic egg production by means of different models. The data used, referring to the production of eggs of pure-bred Rhode Island Red (RIR) line GG, collected in the period from 1992 to 2013, provided by CNPSA EMBRAPA. In Article 1, the objective was to estimate the coefficients of heritability and correlation for partial and total egg production, as well as to verify the possibility of using a reduced rank model. Egg production was evaluated through the egg production rate, composed of 7,087 records grouped in 13 four-week periods (PO1 to PO13) between the 19th to the 70th week of life of the birds, and another 4 accumulated periods (P1 to Ptotal). For the analysis of main components, the periods from PO2 to PO11 were considered. Heritability estimates were 0.39, 0.11, 0.15 and 0.07 (P1, P2, P3 and Ptotal). Genetic correlations between the periods P1xPtotal, P2xPtotal and P3xPtotal were respectively 0.18, 0.53 and 0.99. The reduced post model adjusted for the first two main components provided the best fit. Heritability estimates for this model ranged from 0.10 to 0.26. It was concluded that the selection of birds based on the production of eggs up to the 54th week (P3) has a high genetic correlation with the total egg production, and the genetic covariance structure for posture rate can be adjusted using a reduced rank model containing two main components. The objective of this study was to compare different models of random regression (MRA) with different orders of the Legendre polynomial, in order to identify the best fit model for the RIR bird posture rate and to estimate the covariance and parameter components for this characteristic. The work file consisted of 83,687 records, and weekly productions were grouped into 13 composite periods of 4 weeks (PO1 to PO13). The proposed model included the fixed generation effect, the average production trajectory, the additive random and genetic effect, the direct and residual permanent effect. In order to model the fixed trajectory we used a polynomial of order 4 and for the random trajectories, Legendre orthogonal polynomials were used, varying the orders for the additive and permanent environment genetic effect, with homogeneous or heterogeneous residual variance. Differences between the models were compared using the AIC, BIC, LogL and LRT statistics. The model composed of polynomials of order four for fixed effect, order two for additive effect, eight for permanent environment, containing seven classes of residual variance, was the most adequate for the adjustment of egg production rate data. Heritability estimates ranged from 0.01 to 0.24 and genetic correlations between the periods ranged from -0.27 to 1.00. The selection based on the partial periods PO7 to PO10 have good estimates of heritability, are well correlated and are therefore indicated for the selection of RIR birds.Este estudo teve como objetivo estimar parâmetros genéticos para a característica produção de ovos por meio de diferentes modelos. Os dados utilizados, referentes à produção de ovos de aves de linha pura da raça Rhode Island Red (RIR), linha GG, coletados no período de 1992 a 2013, fornecidos pelo CNPSA EMBRAPA. No Artigo 1 objetivou-se estimar os coeficientes de herdabilidade e correlação para a produção de ovos em períodos parciais e total, assim como, verificar a possibilidade do uso de um modelo de posto reduzido. A produção de ovos foi avaliada por meio da taxa de produção de ovos, composta por 7.087 registros agrupados em 13 períodos de 4 semanas (PO1 a PO13) entre a 19ª a 70ª semana de vida das aves, e outros 4 períodos acumulados (P1 a Ptotal). Para a análise de componentes principais foram consideradas os períodos de PO2 a PO11. As estimativas de herdabilidade foram 0,39, 0,11, 0,15 e 0,07 (P1, P2, P3 e Ptotal). As correlações genéticas entre os períodos P1xPtotal, P2xPtotal e P3xPtotal foram respectivamente 0,18, 0,53 e 0,99. O modelo de posto reduzido ajustado para os dois primeiros componentes principais foi o que proporcionou o melhor ajuste. As estimativas de herdabilidade para esse modelo variaram de 0,10 a 0,26. Conclui-se que a seleção de aves baseada na produção de ovos até a 54ª semana (P3) possui alta correlação genética com a produção total de ovos, e a estrutura de covariância genética para taxa de postura pode ser ajustada utilizando um modelo de posto reduzido contendo dois componentes principais. O Artigo 2 teve como objetivo comparar diferentes modelos de regressão aleatória (MRA), com distintas ordens do polinômio de Legendre, visando identificar o modelo de melhor ajuste para a taxa de postura de aves RIR e estimar os componentes de (co)variância e parâmetros genéticos para essa característica. O arquivo de trabalho ficou composto por 83.687 registros, e as produções semanais foram agrupadas em 13 períodos compostas de 4 semanas (PO1 a PO13). O modelo proposto incluiu o efeito fixo de geração, a trajetória média de produção, o efeito aleatório e genético aditivo, o efeito permanente direto e residual. Para modelar a trajetória fixa foi usado polinômio de ordem quatro e para as trajetórias aleatórias, foram usados os polinômios ortogonais de Legendre, variando as ordens para o efeito genético aditivo e de ambiente permanente, com variância residual homogênea ou heterogênea. As diferenças entre os modelos foram comparadas utilizando os critérios de AIC, BIC, LogL e estatística LRT. O modelo composto por polinômios de ordem quatro para efeito fixo, ordem dois para efeito aditivo, oito para ambiente permanente, contendo sete classes de variância residual, foi o mais adequado para o ajuste dos dados de taxa de produção de ovos. As estimativas de herdabilidade variaram de 0,01 a 0,24 e as correlações genéticas entre os períodos variaram de -0,27 a 1,00. A seleção baseada nos períodos parciais PO7 a PO10 apresentam boas estimativas de herdabilidade, estão bem correlacionados, sendo, portanto, indicados para a seleção de aves RIR.Universidade Federal de Santa MariaBrasilZootecniaUFSMPrograma de Pós-Graduação em ZootecniaCentro de Ciências RuraisRorato, Paulo Roberto Nogarahttp://lattes.cnpq.br/6804416984369871Mello, Fernanda Cristina Bredahttp://lattes.cnpq.br/9702654931601290Prestes, Alan Mirandahttp://lattes.cnpq.br/5914334583507434Stefanello, Catarinahttp://lattes.cnpq.br/1004217874825544Figueiredo, Elsio Antonio Pereira dehttp://lattes.cnpq.br/5886091182250830Dornelles, Mariana de Almeidahttp://lattes.cnpq.br/4198666573592568Metz, Magda2019-02-25T14:29:50Z2019-02-25T14:29:50Z2018-08-20info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttp://repositorio.ufsm.br/handle/1/15738ark:/26339/0013000011t1vporAttribution-NonCommercial-NoDerivatives 4.0 Internationalinfo:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2019-02-26T06:02:35Zoai:repositorio.ufsm.br:1/15738Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/PUBhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.com||manancial@ufsm.bropendoar:2019-02-26T06:02:35Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false
dc.title.none.fl_str_mv Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos
Genetic parameters for the selection of pure lines of the Rhode Island Red breed
title Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos
spellingShingle Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos
Metz, Magda
Análise multivariada
Componentes principais
Regressão aleatória
Multivariate analysis
Principal components
Random regression
CNPQ::CIENCIAS AGRARIAS::ZOOTECNIA
title_short Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos
title_full Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos
title_fullStr Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos
title_full_unstemmed Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos
title_sort Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos
author Metz, Magda
author_facet Metz, Magda
author_role author
dc.contributor.none.fl_str_mv Rorato, Paulo Roberto Nogara
http://lattes.cnpq.br/6804416984369871
Mello, Fernanda Cristina Breda
http://lattes.cnpq.br/9702654931601290
Prestes, Alan Miranda
http://lattes.cnpq.br/5914334583507434
Stefanello, Catarina
http://lattes.cnpq.br/1004217874825544
Figueiredo, Elsio Antonio Pereira de
http://lattes.cnpq.br/5886091182250830
Dornelles, Mariana de Almeida
http://lattes.cnpq.br/4198666573592568
dc.contributor.author.fl_str_mv Metz, Magda
dc.subject.por.fl_str_mv Análise multivariada
Componentes principais
Regressão aleatória
Multivariate analysis
Principal components
Random regression
CNPQ::CIENCIAS AGRARIAS::ZOOTECNIA
topic Análise multivariada
Componentes principais
Regressão aleatória
Multivariate analysis
Principal components
Random regression
CNPQ::CIENCIAS AGRARIAS::ZOOTECNIA
description This study aimed at estimating genetic parameters for the characteristic egg production by means of different models. The data used, referring to the production of eggs of pure-bred Rhode Island Red (RIR) line GG, collected in the period from 1992 to 2013, provided by CNPSA EMBRAPA. In Article 1, the objective was to estimate the coefficients of heritability and correlation for partial and total egg production, as well as to verify the possibility of using a reduced rank model. Egg production was evaluated through the egg production rate, composed of 7,087 records grouped in 13 four-week periods (PO1 to PO13) between the 19th to the 70th week of life of the birds, and another 4 accumulated periods (P1 to Ptotal). For the analysis of main components, the periods from PO2 to PO11 were considered. Heritability estimates were 0.39, 0.11, 0.15 and 0.07 (P1, P2, P3 and Ptotal). Genetic correlations between the periods P1xPtotal, P2xPtotal and P3xPtotal were respectively 0.18, 0.53 and 0.99. The reduced post model adjusted for the first two main components provided the best fit. Heritability estimates for this model ranged from 0.10 to 0.26. It was concluded that the selection of birds based on the production of eggs up to the 54th week (P3) has a high genetic correlation with the total egg production, and the genetic covariance structure for posture rate can be adjusted using a reduced rank model containing two main components. The objective of this study was to compare different models of random regression (MRA) with different orders of the Legendre polynomial, in order to identify the best fit model for the RIR bird posture rate and to estimate the covariance and parameter components for this characteristic. The work file consisted of 83,687 records, and weekly productions were grouped into 13 composite periods of 4 weeks (PO1 to PO13). The proposed model included the fixed generation effect, the average production trajectory, the additive random and genetic effect, the direct and residual permanent effect. In order to model the fixed trajectory we used a polynomial of order 4 and for the random trajectories, Legendre orthogonal polynomials were used, varying the orders for the additive and permanent environment genetic effect, with homogeneous or heterogeneous residual variance. Differences between the models were compared using the AIC, BIC, LogL and LRT statistics. The model composed of polynomials of order four for fixed effect, order two for additive effect, eight for permanent environment, containing seven classes of residual variance, was the most adequate for the adjustment of egg production rate data. Heritability estimates ranged from 0.01 to 0.24 and genetic correlations between the periods ranged from -0.27 to 1.00. The selection based on the partial periods PO7 to PO10 have good estimates of heritability, are well correlated and are therefore indicated for the selection of RIR birds.
publishDate 2018
dc.date.none.fl_str_mv 2018-08-20
2019-02-25T14:29:50Z
2019-02-25T14:29:50Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://repositorio.ufsm.br/handle/1/15738
dc.identifier.dark.fl_str_mv ark:/26339/0013000011t1v
url http://repositorio.ufsm.br/handle/1/15738
identifier_str_mv ark:/26339/0013000011t1v
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Zootecnia
UFSM
Programa de Pós-Graduação em Zootecnia
Centro de Ciências Rurais
publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Zootecnia
UFSM
Programa de Pós-Graduação em Zootecnia
Centro de Ciências Rurais
dc.source.none.fl_str_mv reponame:Manancial - Repositório Digital da UFSM
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Manancial - Repositório Digital da UFSM
collection Manancial - Repositório Digital da UFSM
repository.name.fl_str_mv Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)
repository.mail.fl_str_mv atendimento.sib@ufsm.br||tedebc@gmail.com||manancial@ufsm.br
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