Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos
| Ano de defesa: | 2018 |
|---|---|
| Autor(a) principal: | |
| Orientador(a): | |
| Banca de defesa: | |
| Tipo de documento: | Tese |
| Tipo de acesso: | Acesso aberto |
| dARK ID: | ark:/26339/0013000011t1v |
| Idioma: | por |
| Instituição de defesa: |
Universidade Federal de Santa Maria
Brasil Zootecnia UFSM Programa de Pós-Graduação em Zootecnia Centro de Ciências Rurais |
| Programa de Pós-Graduação: |
Não Informado pela instituição
|
| Departamento: |
Não Informado pela instituição
|
| País: |
Não Informado pela instituição
|
| Palavras-chave em Português: | |
| Link de acesso: | http://repositorio.ufsm.br/handle/1/15738 |
Resumo: | This study aimed at estimating genetic parameters for the characteristic egg production by means of different models. The data used, referring to the production of eggs of pure-bred Rhode Island Red (RIR) line GG, collected in the period from 1992 to 2013, provided by CNPSA EMBRAPA. In Article 1, the objective was to estimate the coefficients of heritability and correlation for partial and total egg production, as well as to verify the possibility of using a reduced rank model. Egg production was evaluated through the egg production rate, composed of 7,087 records grouped in 13 four-week periods (PO1 to PO13) between the 19th to the 70th week of life of the birds, and another 4 accumulated periods (P1 to Ptotal). For the analysis of main components, the periods from PO2 to PO11 were considered. Heritability estimates were 0.39, 0.11, 0.15 and 0.07 (P1, P2, P3 and Ptotal). Genetic correlations between the periods P1xPtotal, P2xPtotal and P3xPtotal were respectively 0.18, 0.53 and 0.99. The reduced post model adjusted for the first two main components provided the best fit. Heritability estimates for this model ranged from 0.10 to 0.26. It was concluded that the selection of birds based on the production of eggs up to the 54th week (P3) has a high genetic correlation with the total egg production, and the genetic covariance structure for posture rate can be adjusted using a reduced rank model containing two main components. The objective of this study was to compare different models of random regression (MRA) with different orders of the Legendre polynomial, in order to identify the best fit model for the RIR bird posture rate and to estimate the covariance and parameter components for this characteristic. The work file consisted of 83,687 records, and weekly productions were grouped into 13 composite periods of 4 weeks (PO1 to PO13). The proposed model included the fixed generation effect, the average production trajectory, the additive random and genetic effect, the direct and residual permanent effect. In order to model the fixed trajectory we used a polynomial of order 4 and for the random trajectories, Legendre orthogonal polynomials were used, varying the orders for the additive and permanent environment genetic effect, with homogeneous or heterogeneous residual variance. Differences between the models were compared using the AIC, BIC, LogL and LRT statistics. The model composed of polynomials of order four for fixed effect, order two for additive effect, eight for permanent environment, containing seven classes of residual variance, was the most adequate for the adjustment of egg production rate data. Heritability estimates ranged from 0.01 to 0.24 and genetic correlations between the periods ranged from -0.27 to 1.00. The selection based on the partial periods PO7 to PO10 have good estimates of heritability, are well correlated and are therefore indicated for the selection of RIR birds. |
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Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovosGenetic parameters for the selection of pure lines of the Rhode Island Red breedAnálise multivariadaComponentes principaisRegressão aleatóriaMultivariate analysisPrincipal componentsRandom regressionCNPQ::CIENCIAS AGRARIAS::ZOOTECNIAThis study aimed at estimating genetic parameters for the characteristic egg production by means of different models. The data used, referring to the production of eggs of pure-bred Rhode Island Red (RIR) line GG, collected in the period from 1992 to 2013, provided by CNPSA EMBRAPA. In Article 1, the objective was to estimate the coefficients of heritability and correlation for partial and total egg production, as well as to verify the possibility of using a reduced rank model. Egg production was evaluated through the egg production rate, composed of 7,087 records grouped in 13 four-week periods (PO1 to PO13) between the 19th to the 70th week of life of the birds, and another 4 accumulated periods (P1 to Ptotal). For the analysis of main components, the periods from PO2 to PO11 were considered. Heritability estimates were 0.39, 0.11, 0.15 and 0.07 (P1, P2, P3 and Ptotal). Genetic correlations between the periods P1xPtotal, P2xPtotal and P3xPtotal were respectively 0.18, 0.53 and 0.99. The reduced post model adjusted for the first two main components provided the best fit. Heritability estimates for this model ranged from 0.10 to 0.26. It was concluded that the selection of birds based on the production of eggs up to the 54th week (P3) has a high genetic correlation with the total egg production, and the genetic covariance structure for posture rate can be adjusted using a reduced rank model containing two main components. The objective of this study was to compare different models of random regression (MRA) with different orders of the Legendre polynomial, in order to identify the best fit model for the RIR bird posture rate and to estimate the covariance and parameter components for this characteristic. The work file consisted of 83,687 records, and weekly productions were grouped into 13 composite periods of 4 weeks (PO1 to PO13). The proposed model included the fixed generation effect, the average production trajectory, the additive random and genetic effect, the direct and residual permanent effect. In order to model the fixed trajectory we used a polynomial of order 4 and for the random trajectories, Legendre orthogonal polynomials were used, varying the orders for the additive and permanent environment genetic effect, with homogeneous or heterogeneous residual variance. Differences between the models were compared using the AIC, BIC, LogL and LRT statistics. The model composed of polynomials of order four for fixed effect, order two for additive effect, eight for permanent environment, containing seven classes of residual variance, was the most adequate for the adjustment of egg production rate data. Heritability estimates ranged from 0.01 to 0.24 and genetic correlations between the periods ranged from -0.27 to 1.00. The selection based on the partial periods PO7 to PO10 have good estimates of heritability, are well correlated and are therefore indicated for the selection of RIR birds.Este estudo teve como objetivo estimar parâmetros genéticos para a característica produção de ovos por meio de diferentes modelos. Os dados utilizados, referentes à produção de ovos de aves de linha pura da raça Rhode Island Red (RIR), linha GG, coletados no período de 1992 a 2013, fornecidos pelo CNPSA EMBRAPA. No Artigo 1 objetivou-se estimar os coeficientes de herdabilidade e correlação para a produção de ovos em períodos parciais e total, assim como, verificar a possibilidade do uso de um modelo de posto reduzido. A produção de ovos foi avaliada por meio da taxa de produção de ovos, composta por 7.087 registros agrupados em 13 períodos de 4 semanas (PO1 a PO13) entre a 19ª a 70ª semana de vida das aves, e outros 4 períodos acumulados (P1 a Ptotal). Para a análise de componentes principais foram consideradas os períodos de PO2 a PO11. As estimativas de herdabilidade foram 0,39, 0,11, 0,15 e 0,07 (P1, P2, P3 e Ptotal). As correlações genéticas entre os períodos P1xPtotal, P2xPtotal e P3xPtotal foram respectivamente 0,18, 0,53 e 0,99. O modelo de posto reduzido ajustado para os dois primeiros componentes principais foi o que proporcionou o melhor ajuste. As estimativas de herdabilidade para esse modelo variaram de 0,10 a 0,26. Conclui-se que a seleção de aves baseada na produção de ovos até a 54ª semana (P3) possui alta correlação genética com a produção total de ovos, e a estrutura de covariância genética para taxa de postura pode ser ajustada utilizando um modelo de posto reduzido contendo dois componentes principais. O Artigo 2 teve como objetivo comparar diferentes modelos de regressão aleatória (MRA), com distintas ordens do polinômio de Legendre, visando identificar o modelo de melhor ajuste para a taxa de postura de aves RIR e estimar os componentes de (co)variância e parâmetros genéticos para essa característica. O arquivo de trabalho ficou composto por 83.687 registros, e as produções semanais foram agrupadas em 13 períodos compostas de 4 semanas (PO1 a PO13). O modelo proposto incluiu o efeito fixo de geração, a trajetória média de produção, o efeito aleatório e genético aditivo, o efeito permanente direto e residual. Para modelar a trajetória fixa foi usado polinômio de ordem quatro e para as trajetórias aleatórias, foram usados os polinômios ortogonais de Legendre, variando as ordens para o efeito genético aditivo e de ambiente permanente, com variância residual homogênea ou heterogênea. As diferenças entre os modelos foram comparadas utilizando os critérios de AIC, BIC, LogL e estatística LRT. O modelo composto por polinômios de ordem quatro para efeito fixo, ordem dois para efeito aditivo, oito para ambiente permanente, contendo sete classes de variância residual, foi o mais adequado para o ajuste dos dados de taxa de produção de ovos. As estimativas de herdabilidade variaram de 0,01 a 0,24 e as correlações genéticas entre os períodos variaram de -0,27 a 1,00. A seleção baseada nos períodos parciais PO7 a PO10 apresentam boas estimativas de herdabilidade, estão bem correlacionados, sendo, portanto, indicados para a seleção de aves RIR.Universidade Federal de Santa MariaBrasilZootecniaUFSMPrograma de Pós-Graduação em ZootecniaCentro de Ciências RuraisRorato, Paulo Roberto Nogarahttp://lattes.cnpq.br/6804416984369871Mello, Fernanda Cristina Bredahttp://lattes.cnpq.br/9702654931601290Prestes, Alan Mirandahttp://lattes.cnpq.br/5914334583507434Stefanello, Catarinahttp://lattes.cnpq.br/1004217874825544Figueiredo, Elsio Antonio Pereira dehttp://lattes.cnpq.br/5886091182250830Dornelles, Mariana de Almeidahttp://lattes.cnpq.br/4198666573592568Metz, Magda2019-02-25T14:29:50Z2019-02-25T14:29:50Z2018-08-20info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttp://repositorio.ufsm.br/handle/1/15738ark:/26339/0013000011t1vporAttribution-NonCommercial-NoDerivatives 4.0 Internationalinfo:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2019-02-26T06:02:35Zoai:repositorio.ufsm.br:1/15738Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/PUBhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.com||manancial@ufsm.bropendoar:2019-02-26T06:02:35Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false |
| dc.title.none.fl_str_mv |
Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos Genetic parameters for the selection of pure lines of the Rhode Island Red breed |
| title |
Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos |
| spellingShingle |
Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos Metz, Magda Análise multivariada Componentes principais Regressão aleatória Multivariate analysis Principal components Random regression CNPQ::CIENCIAS AGRARIAS::ZOOTECNIA |
| title_short |
Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos |
| title_full |
Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos |
| title_fullStr |
Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos |
| title_full_unstemmed |
Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos |
| title_sort |
Parâmetros genéticos para seleção de linhas puras da raça Rhode Island Red para produção de ovos |
| author |
Metz, Magda |
| author_facet |
Metz, Magda |
| author_role |
author |
| dc.contributor.none.fl_str_mv |
Rorato, Paulo Roberto Nogara http://lattes.cnpq.br/6804416984369871 Mello, Fernanda Cristina Breda http://lattes.cnpq.br/9702654931601290 Prestes, Alan Miranda http://lattes.cnpq.br/5914334583507434 Stefanello, Catarina http://lattes.cnpq.br/1004217874825544 Figueiredo, Elsio Antonio Pereira de http://lattes.cnpq.br/5886091182250830 Dornelles, Mariana de Almeida http://lattes.cnpq.br/4198666573592568 |
| dc.contributor.author.fl_str_mv |
Metz, Magda |
| dc.subject.por.fl_str_mv |
Análise multivariada Componentes principais Regressão aleatória Multivariate analysis Principal components Random regression CNPQ::CIENCIAS AGRARIAS::ZOOTECNIA |
| topic |
Análise multivariada Componentes principais Regressão aleatória Multivariate analysis Principal components Random regression CNPQ::CIENCIAS AGRARIAS::ZOOTECNIA |
| description |
This study aimed at estimating genetic parameters for the characteristic egg production by means of different models. The data used, referring to the production of eggs of pure-bred Rhode Island Red (RIR) line GG, collected in the period from 1992 to 2013, provided by CNPSA EMBRAPA. In Article 1, the objective was to estimate the coefficients of heritability and correlation for partial and total egg production, as well as to verify the possibility of using a reduced rank model. Egg production was evaluated through the egg production rate, composed of 7,087 records grouped in 13 four-week periods (PO1 to PO13) between the 19th to the 70th week of life of the birds, and another 4 accumulated periods (P1 to Ptotal). For the analysis of main components, the periods from PO2 to PO11 were considered. Heritability estimates were 0.39, 0.11, 0.15 and 0.07 (P1, P2, P3 and Ptotal). Genetic correlations between the periods P1xPtotal, P2xPtotal and P3xPtotal were respectively 0.18, 0.53 and 0.99. The reduced post model adjusted for the first two main components provided the best fit. Heritability estimates for this model ranged from 0.10 to 0.26. It was concluded that the selection of birds based on the production of eggs up to the 54th week (P3) has a high genetic correlation with the total egg production, and the genetic covariance structure for posture rate can be adjusted using a reduced rank model containing two main components. The objective of this study was to compare different models of random regression (MRA) with different orders of the Legendre polynomial, in order to identify the best fit model for the RIR bird posture rate and to estimate the covariance and parameter components for this characteristic. The work file consisted of 83,687 records, and weekly productions were grouped into 13 composite periods of 4 weeks (PO1 to PO13). The proposed model included the fixed generation effect, the average production trajectory, the additive random and genetic effect, the direct and residual permanent effect. In order to model the fixed trajectory we used a polynomial of order 4 and for the random trajectories, Legendre orthogonal polynomials were used, varying the orders for the additive and permanent environment genetic effect, with homogeneous or heterogeneous residual variance. Differences between the models were compared using the AIC, BIC, LogL and LRT statistics. The model composed of polynomials of order four for fixed effect, order two for additive effect, eight for permanent environment, containing seven classes of residual variance, was the most adequate for the adjustment of egg production rate data. Heritability estimates ranged from 0.01 to 0.24 and genetic correlations between the periods ranged from -0.27 to 1.00. The selection based on the partial periods PO7 to PO10 have good estimates of heritability, are well correlated and are therefore indicated for the selection of RIR birds. |
| publishDate |
2018 |
| dc.date.none.fl_str_mv |
2018-08-20 2019-02-25T14:29:50Z 2019-02-25T14:29:50Z |
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info:eu-repo/semantics/publishedVersion |
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info:eu-repo/semantics/doctoralThesis |
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doctoralThesis |
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http://repositorio.ufsm.br/handle/1/15738 |
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ark:/26339/0013000011t1v |
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http://repositorio.ufsm.br/handle/1/15738 |
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ark:/26339/0013000011t1v |
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por |
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Attribution-NonCommercial-NoDerivatives 4.0 International info:eu-repo/semantics/openAccess |
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Attribution-NonCommercial-NoDerivatives 4.0 International |
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openAccess |
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Universidade Federal de Santa Maria Brasil Zootecnia UFSM Programa de Pós-Graduação em Zootecnia Centro de Ciências Rurais |
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Universidade Federal de Santa Maria Brasil Zootecnia UFSM Programa de Pós-Graduação em Zootecnia Centro de Ciências Rurais |
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reponame:Manancial - Repositório Digital da UFSM instname:Universidade Federal de Santa Maria (UFSM) instacron:UFSM |
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Universidade Federal de Santa Maria (UFSM) |
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Manancial - Repositório Digital da UFSM |
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Manancial - Repositório Digital da UFSM |
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Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM) |
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