Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agricultura

Detalhes bibliográficos
Ano de defesa: 2022
Autor(a) principal: Santos, Ethiane Rozo dos
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
dARK ID: ark:/26339/001300000pn87
Idioma: por
Instituição de defesa: Universidade Federal de Santa Maria
Brasil
Bioquímica
UFSM
Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica
Centro de Ciências Naturais e Exatas
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: http://repositorio.ufsm.br/handle/1/27777
Resumo: Iflaviruses are arthropod viruses that may or may not cause symptoms in their hosts. Usually, whose studies are restricted to sequencing, genome description, and evolutionary analyses. This was the case of the iflavirus Halyomorpha halys virus (HhV), originally described from the transcriptome of healthy Halyomorpha halys. H. halys is an Asian stink bug, invasive in North America with great importance for agriculture, but not present in Brazil. In Brazil, the ecological niche is efficiently occupied by endemic species such as Euschistus heros, Chinavia ubica and Dichelops melacanthus. In an attempt to understand more deeply the relationship between asymptomatic iflavirus and host, this thesis aimed to characterize the HhV virus at different levels in relation to H. halys and to the three species of bugs endemic to Brazil. Through the antenna transcriptome of the three species arising from laboratory colonies, genomes of three HhV isolates with high copy number were found here. The viruses found were evaluated for genome characteristics, phylogenetic relationships, replication level, prevalence, sequence similarity and appearance of the isolated particle. All the results confirmed that they were HhV isolates, which, in addition to being multi-specific, have a wide geographic distribution and replicates at very high levels in insects. It is still unclear how the same virus infects geographically distant insects; although apparently present in low proportion in the field. Thus, in an attempt to elucidate such transmission mechanisms, we investigated whether the pentatomid egg-parasitoid wasp Telenomus podisi, widely distributed throughout America and which parasitizes all four species, could be a vehicle for HhV. The total body transcriptome of T. podisi was carried out and the complete genome of HhV was found. However, HhV was in much lower copy number than in the context of pentatomid infection. Two of four pools of 50 microwasps were positive for HhV. In this thesis, many fundamental questions were generated, such as the route of infection and transmission, prevalence in the field or how the infection can influence the insect's sensitivity to chemical insecticide. However, the results found here indicate a sophisticated persistent interaction between iflavirus and host, and open possibilities of understanding for uses of asymptomatic iflavirus as bioinsecticides associated with other lethal tools or as biotechnological tools.
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spelling Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agriculturaCharacterization of a multiespecific iflavirus isolated from pentatomid pest of agricultureIflavírusPentatomídeosParasitoideInfecção assintomáticaAgriculturaTranscriptomaIflavirusPentatomidsParasitoidAsymptomatic infeccionAgricultureTranscriptomeCNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICAIflaviruses are arthropod viruses that may or may not cause symptoms in their hosts. Usually, whose studies are restricted to sequencing, genome description, and evolutionary analyses. This was the case of the iflavirus Halyomorpha halys virus (HhV), originally described from the transcriptome of healthy Halyomorpha halys. H. halys is an Asian stink bug, invasive in North America with great importance for agriculture, but not present in Brazil. In Brazil, the ecological niche is efficiently occupied by endemic species such as Euschistus heros, Chinavia ubica and Dichelops melacanthus. In an attempt to understand more deeply the relationship between asymptomatic iflavirus and host, this thesis aimed to characterize the HhV virus at different levels in relation to H. halys and to the three species of bugs endemic to Brazil. Through the antenna transcriptome of the three species arising from laboratory colonies, genomes of three HhV isolates with high copy number were found here. The viruses found were evaluated for genome characteristics, phylogenetic relationships, replication level, prevalence, sequence similarity and appearance of the isolated particle. All the results confirmed that they were HhV isolates, which, in addition to being multi-specific, have a wide geographic distribution and replicates at very high levels in insects. It is still unclear how the same virus infects geographically distant insects; although apparently present in low proportion in the field. Thus, in an attempt to elucidate such transmission mechanisms, we investigated whether the pentatomid egg-parasitoid wasp Telenomus podisi, widely distributed throughout America and which parasitizes all four species, could be a vehicle for HhV. The total body transcriptome of T. podisi was carried out and the complete genome of HhV was found. However, HhV was in much lower copy number than in the context of pentatomid infection. Two of four pools of 50 microwasps were positive for HhV. In this thesis, many fundamental questions were generated, such as the route of infection and transmission, prevalence in the field or how the infection can influence the insect's sensitivity to chemical insecticide. However, the results found here indicate a sophisticated persistent interaction between iflavirus and host, and open possibilities of understanding for uses of asymptomatic iflavirus as bioinsecticides associated with other lethal tools or as biotechnological tools.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESConselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPqIflavírus são vírus de artrópodes que em sua maioria causam infecções assintomáticas em seus hospedeiros. Geralmente, seu estudo fica restrito à descrição de genomas encontrados em sequenciamento de alto desempenho e análises evolutivas. Este é o caso do iflavírus Halyomorpha halys virus (HhV), originalmente descrito do transcriptoma de Halyomorpha halys assintomáticos. H. halys é um percevejo-praga asiático, invasor da América do Norte com grande importância para agricultura, mas que não está presente no Brasil. No Brasil, o nicho ecológico é eficientemente ocupado por espécies endêmicas como Euschistus heros, Chinavia ubica e Dichelops melacanthus. Na tentativa de entender mais profundamente a relação de iflavírus assintomáticos e seus hospedeiros, esta tese objetivou caracterizar em diferentes níveis o vírus HhV na relação com H. halys e com as três espécies de percevejos endêmicos do Brasil. Através do transcriptoma de antena das três espécies decorrentes de colônias de laboratório, foram aqui encontrados genomas de três isolados de HhV com alto número de cópias. Os vírus encontrados foram avaliados quanto a características dos genomas, relações filogenéticas, nível de replicação, prevalência, similaridade de sequências e aparência da partícula isolada. Todos os resultados confirmaram que se tratava de isolados de HhV, que além de multiespecífico, possui uma ampla distribuição geográfica e se replica em altíssimos níveis nos insetos avaliados. Ainda não está esclarecida como um mesmo vírus infecta insetos geograficamente distantes; embora aparentemente presente em baixa proporção no campo. A fim de elucidar mecanismos de transmissão, foi investigado se a vespa parasitoide de ovos de pentatomídeos da espécie Telenomus podisi, amplamente distribuída em toda América e que parasita as quatro espécies, poderia ser um veículo para HhV. Foi assim realizado o transcriptoma de corpo total de T. podisi e foi encontrado o genoma completo de HhV. Entretanto, HhV estava em número de cópias muito menor que no contexto de infecção dos pentatomídeos. Dois de quatro ‘pools’ de 50 microvespas estavam positivas para HhV. Nessa tese foram geradas muitas perguntas fundamentais, tais como rota de infecção e transmissão, prevalência no campo ou como a infecção pode influenciar na sensibilidade do inseto a inseticida químico. Os resultados aqui encontrados indicam uma interação persistente sofisticada entre iflavírus e hospedeiro, e abrem possibilidades de compreensão para usos de iflavírus assintomático associado a outras ferramentas como bioinseticida ou como ferramentas biotecnológicas.Universidade Federal de Santa MariaBrasilBioquímicaUFSMPrograma de Pós-Graduação em Ciências Biológicas: Bioquímica ToxicológicaCentro de Ciências Naturais e ExatasAraújo, Daniel Mendes Pereira Ardisson de Araújohttp://lattes.cnpq.br/5900778605189135Schuch, André PassagliaSosa-Gomez, Daniel RicardoZotti, Moisés JoãoRibeiro, Simone da GraçaSantos, Ethiane Rozo dos2023-02-10T12:35:56Z2023-02-10T12:35:56Z2022-09-21info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttp://repositorio.ufsm.br/handle/1/27777ark:/26339/001300000pn87porAttribution-NonCommercial-NoDerivatives 4.0 Internationalinfo:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2023-02-10T12:35:57Zoai:repositorio.ufsm.br:1/27777Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/PUBhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.com||manancial@ufsm.bropendoar:2023-02-10T12:35:57Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false
dc.title.none.fl_str_mv Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agricultura
Characterization of a multiespecific iflavirus isolated from pentatomid pest of agriculture
title Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agricultura
spellingShingle Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agricultura
Santos, Ethiane Rozo dos
Iflavírus
Pentatomídeos
Parasitoide
Infecção assintomática
Agricultura
Transcriptoma
Iflavirus
Pentatomids
Parasitoid
Asymptomatic infeccion
Agriculture
Transcriptome
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA
title_short Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agricultura
title_full Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agricultura
title_fullStr Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agricultura
title_full_unstemmed Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agricultura
title_sort Caracterização de um iflavírus multiespecífico isolado de pentatomídeos-praga da agricultura
author Santos, Ethiane Rozo dos
author_facet Santos, Ethiane Rozo dos
author_role author
dc.contributor.none.fl_str_mv Araújo, Daniel Mendes Pereira Ardisson de Araújo
http://lattes.cnpq.br/5900778605189135
Schuch, André Passaglia
Sosa-Gomez, Daniel Ricardo
Zotti, Moisés João
Ribeiro, Simone da Graça
dc.contributor.author.fl_str_mv Santos, Ethiane Rozo dos
dc.subject.por.fl_str_mv Iflavírus
Pentatomídeos
Parasitoide
Infecção assintomática
Agricultura
Transcriptoma
Iflavirus
Pentatomids
Parasitoid
Asymptomatic infeccion
Agriculture
Transcriptome
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA
topic Iflavírus
Pentatomídeos
Parasitoide
Infecção assintomática
Agricultura
Transcriptoma
Iflavirus
Pentatomids
Parasitoid
Asymptomatic infeccion
Agriculture
Transcriptome
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA
description Iflaviruses are arthropod viruses that may or may not cause symptoms in their hosts. Usually, whose studies are restricted to sequencing, genome description, and evolutionary analyses. This was the case of the iflavirus Halyomorpha halys virus (HhV), originally described from the transcriptome of healthy Halyomorpha halys. H. halys is an Asian stink bug, invasive in North America with great importance for agriculture, but not present in Brazil. In Brazil, the ecological niche is efficiently occupied by endemic species such as Euschistus heros, Chinavia ubica and Dichelops melacanthus. In an attempt to understand more deeply the relationship between asymptomatic iflavirus and host, this thesis aimed to characterize the HhV virus at different levels in relation to H. halys and to the three species of bugs endemic to Brazil. Through the antenna transcriptome of the three species arising from laboratory colonies, genomes of three HhV isolates with high copy number were found here. The viruses found were evaluated for genome characteristics, phylogenetic relationships, replication level, prevalence, sequence similarity and appearance of the isolated particle. All the results confirmed that they were HhV isolates, which, in addition to being multi-specific, have a wide geographic distribution and replicates at very high levels in insects. It is still unclear how the same virus infects geographically distant insects; although apparently present in low proportion in the field. Thus, in an attempt to elucidate such transmission mechanisms, we investigated whether the pentatomid egg-parasitoid wasp Telenomus podisi, widely distributed throughout America and which parasitizes all four species, could be a vehicle for HhV. The total body transcriptome of T. podisi was carried out and the complete genome of HhV was found. However, HhV was in much lower copy number than in the context of pentatomid infection. Two of four pools of 50 microwasps were positive for HhV. In this thesis, many fundamental questions were generated, such as the route of infection and transmission, prevalence in the field or how the infection can influence the insect's sensitivity to chemical insecticide. However, the results found here indicate a sophisticated persistent interaction between iflavirus and host, and open possibilities of understanding for uses of asymptomatic iflavirus as bioinsecticides associated with other lethal tools or as biotechnological tools.
publishDate 2022
dc.date.none.fl_str_mv 2022-09-21
2023-02-10T12:35:56Z
2023-02-10T12:35:56Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://repositorio.ufsm.br/handle/1/27777
dc.identifier.dark.fl_str_mv ark:/26339/001300000pn87
url http://repositorio.ufsm.br/handle/1/27777
identifier_str_mv ark:/26339/001300000pn87
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Bioquímica
UFSM
Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica
Centro de Ciências Naturais e Exatas
publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Bioquímica
UFSM
Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica
Centro de Ciências Naturais e Exatas
dc.source.none.fl_str_mv reponame:Manancial - Repositório Digital da UFSM
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Manancial - Repositório Digital da UFSM
collection Manancial - Repositório Digital da UFSM
repository.name.fl_str_mv Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)
repository.mail.fl_str_mv atendimento.sib@ufsm.br||tedebc@gmail.com||manancial@ufsm.br
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