Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa

Detalhes bibliográficos
Ano de defesa: 2020
Autor(a) principal: Oliveira, Pedro Antônio de Ávila
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Uberlândia
Brasil
Programa de Pós-graduação em Biologia Celular e Estrutural Aplicadas
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: https://repositorio.ufu.br/handle/123456789/30359
http://doi.org/10.14393/ufu.di.2020.710
Resumo: Squamous cell carcinoma (SCC) of the oral cavity is one of the most common and deadliest head and neck neoplasms. Usually, SCC is preceded by lesions known as oral potentially malignant disorders (OPMDs). Among them, oral leukoplakia (OL) is one of the most prevalent and is characterized clinically by a white lesion and histologically by presenting hyperkeratosis and acanthosis. A variant of LB is a lesion known as proliferative verrucous leukoplakia (PVL), which has a higher malignant transformation rate than others OPMDs. However, the differential diagnosis between them is still a great challenge, in addition to the fact that both may present very similar histopathological aspects, especially in their early stages. Recently, artificial intelligence (AI) has proved to be very useful for the diagnosis and prognosis of malignant neoplasms and other diseases. Studies have shown that computational algorithms can detect tissue changes undetectable to a pathologist, hence helping them diagnose. However, for oral lesions, such as OL and PVL, there are no studies that use such a tool for diagnostic purposes. This study aimed to investigate cell nuclei from OL and PVL lesions through a computer system to elucidate whether this cell compartment is altered between them and a polynomial classifier capable of classifying the two lesions only with the extracted nuclear aspects. Sixty-one and three OL and PVL lesions, respectively, were gathered, and their H&E-stained slides were recovered and photographed for training and computational analysis. Clinicopathological and socio-demographic data were also raised from the requested pathological exam and then tabulated. The Mask R-CNN neural network was applied as a nuclear segmentation method and the polynomial classifier for OL and PVL classification based on the following nuclear information extracted by the network: area, perimeter, eccentricity, orientation, solidity, entropy and Moran Index. Clinicopathological and socio-demographic data from the OL-affected patients revealed that most of them were smokers and males, while the PVL-affected patients were female, and 1/3 underwent a malignant transformation. The neural network employed obtained an average accuracy of 92.95% in the identification of cell nuclei. Significant differences in 11 of the 13 nuclear characteristics studied were observed between OL and PVL, with the averages always higher in the LVP lesions, except for solidity. The polynomial classifier classified the two lesions with an average area under the curve of 97.06%. These data showed that the analysis of the nuclei through computational methods could be an essential tool to aid the diagnosis between OL and PVL lesions.
id UFU_40de2b77c985b867924451b07cf9c8de
oai_identifier_str oai:repositorio.ufu.br:123456789/30359
network_acronym_str UFU
network_name_str Repositório Institucional da UFU
repository_id_str
spelling Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativaUse of artificial intelligence in nuclear characterization and classification between oral leukoplakia and proliferative verrucous leukoplakiaLeucoplasia bucalOral leukoplakiaDiagnósticoDiagnosisInteligência artificialArtificial intelligenceCNPQ::CIENCIAS BIOLOGICAS::MORFOLOGIA::CITOLOGIA E BIOLOGIA CELULARInteligência artificialLeucoplasia bucalCitologiaSquamous cell carcinoma (SCC) of the oral cavity is one of the most common and deadliest head and neck neoplasms. Usually, SCC is preceded by lesions known as oral potentially malignant disorders (OPMDs). Among them, oral leukoplakia (OL) is one of the most prevalent and is characterized clinically by a white lesion and histologically by presenting hyperkeratosis and acanthosis. A variant of LB is a lesion known as proliferative verrucous leukoplakia (PVL), which has a higher malignant transformation rate than others OPMDs. However, the differential diagnosis between them is still a great challenge, in addition to the fact that both may present very similar histopathological aspects, especially in their early stages. Recently, artificial intelligence (AI) has proved to be very useful for the diagnosis and prognosis of malignant neoplasms and other diseases. Studies have shown that computational algorithms can detect tissue changes undetectable to a pathologist, hence helping them diagnose. However, for oral lesions, such as OL and PVL, there are no studies that use such a tool for diagnostic purposes. This study aimed to investigate cell nuclei from OL and PVL lesions through a computer system to elucidate whether this cell compartment is altered between them and a polynomial classifier capable of classifying the two lesions only with the extracted nuclear aspects. Sixty-one and three OL and PVL lesions, respectively, were gathered, and their H&E-stained slides were recovered and photographed for training and computational analysis. Clinicopathological and socio-demographic data were also raised from the requested pathological exam and then tabulated. The Mask R-CNN neural network was applied as a nuclear segmentation method and the polynomial classifier for OL and PVL classification based on the following nuclear information extracted by the network: area, perimeter, eccentricity, orientation, solidity, entropy and Moran Index. Clinicopathological and socio-demographic data from the OL-affected patients revealed that most of them were smokers and males, while the PVL-affected patients were female, and 1/3 underwent a malignant transformation. The neural network employed obtained an average accuracy of 92.95% in the identification of cell nuclei. Significant differences in 11 of the 13 nuclear characteristics studied were observed between OL and PVL, with the averages always higher in the LVP lesions, except for solidity. The polynomial classifier classified the two lesions with an average area under the curve of 97.06%. These data showed that the analysis of the nuclei through computational methods could be an essential tool to aid the diagnosis between OL and PVL lesions.CAPES - Coordenação de Aperfeiçoamento de Pessoal de Nível SuperiorDissertação (Mestrado)O carcinoma de células escamosas (CCE) de cavidade bucal é uma das neoplasias mais comuns e agressivas de cabeça e pescoço. Usualmente, o CCE é precedido por lesões denominadas desordens bucais potencialmente malignas (DBPMs). Dentre elas, a leucoplasia bucal (LB) é uma das mais prevalentes, caracterizando-se clinicamente por uma lesão branca e histologicamente por apresentar hiperparaqueratose e acantose. Uma variante da LB é a leucoplasia verrucosa proliferativa (LVP), que apesar de incomum, possui uma alta taxa de transformação maligna. Contudo, o diagnóstico diferencial entre elas ainda é um grande desafio, além do fato de ambas poderem apresentar aspectos histopatológicos muito parecidos, especialmente nas fases iniciais. Nos últimos anos, a inteligência artificial (IA) tem se revelado muito útil para fins de diagnóstico e prognóstico de neoplasias malignas e outras doenças. Trabalhos na área mostram que algoritmos computacionais conseguem detectar alterações teciduais imperceptíveis para um patologista, auxiliando no diagnóstico delas. No entanto, para lesões de boca, como o LB e LVP, não há estudos que empregam tal ferramenta para fins de diagnóstico. O objetivo deste estudo foi investigar os núcleos celulares das LBs e das LVPs através de um sistema computacional na tentativa de elucidar se esse compartimento celular se encontra diferente entre elas bem como o emprego de um classificador polinomial capaz de classificar as duas lesões somente com os aspectos nucleares extraídos. Sessenta e um casos de LB e três casos de LVP foram levantados, e as lâminas coradas em hematoxilina e eosina foram recuperadas e fotografadas para o treinamento e análise computacional. Dados clinicopatológicos e sócio-demográficos dos pacientes também foram obtidos a partir dos pedidos de exame e tabulados. Aplicou-se a rede neural Mask R-CNN como método de segmentação nuclear e o classificador polinomial para classificação de LB e LVP a partir das seguintes informações nucleares extraídas pela rede: área, perímetro, excentricidade, orientação, solidez, entropias e Índice Moran. Os dados clinicopatológicos e sócio-demográficos das LBs revelaram que a maioria dos pacientes era tabagista e do sexo masculino, enquanto nas LVPs a maioria era do sexo feminino e 1/3 sofreu transformação maligna. A rede neural empregada obteve uma média de acurácia de 92,95% na identificação dos núcleos celulares. Diferenças significantes em 11 das 13 características nucleares estudadas foram observadas entre LB e LVP, com as médias sempre maiores para as LVPs, exceto solidez. O classificador polinomial usado conseguiu classificar as duas lesões com uma média na área sob a curva (AUC) de 97,06%. Esses dados mostram que a análise de informações extraídas dos núcleos celulares por métodos computacionais pode ser uma importante ferramenta de auxílio no diagnóstico entre essas duas lesões.Universidade Federal de UberlândiaBrasilPrograma de Pós-graduação em Biologia Celular e Estrutural AplicadasFaria, Paulo Rogério dehttp://lattes.cnpq.br/9929793565253378Moraes, Alberto da Silvahttp://lattes.cnpq.br/7303349255103658Silva, Marco Túllio Brazãohttp://lattes.cnpq.br/4432379245829336Oliveira, Pedro Antônio de Ávila2020-11-12T17:36:54Z2020-11-12T17:36:54Z2020-08-28info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfOLIVEIRA, Pedro Antônio de Ávila. Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa. 2020. 90 f. Dissertação (Mestrado em Biologia Celular e Estrutural Aplicadas) - Universidade Federal de Uberlândia, Uberlândia, 2020. DOI http://doi.org/10.14393/ufu.di.2020.710.https://repositorio.ufu.br/handle/123456789/30359http://doi.org/10.14393/ufu.di.2020.710porhttp://creativecommons.org/licenses/by-nc-nd/3.0/us/info:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFUinstname:Universidade Federal de Uberlândia (UFU)instacron:UFU2020-11-13T06:19:46Zoai:repositorio.ufu.br:123456789/30359Repositório InstitucionalONGhttp://repositorio.ufu.br/oai/requestdiinf@dirbi.ufu.bropendoar:2020-11-13T06:19:46Repositório Institucional da UFU - Universidade Federal de Uberlândia (UFU)false
dc.title.none.fl_str_mv Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa
Use of artificial intelligence in nuclear characterization and classification between oral leukoplakia and proliferative verrucous leukoplakia
title Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa
spellingShingle Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa
Oliveira, Pedro Antônio de Ávila
Leucoplasia bucal
Oral leukoplakia
Diagnóstico
Diagnosis
Inteligência artificial
Artificial intelligence
CNPQ::CIENCIAS BIOLOGICAS::MORFOLOGIA::CITOLOGIA E BIOLOGIA CELULAR
Inteligência artificial
Leucoplasia bucal
Citologia
title_short Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa
title_full Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa
title_fullStr Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa
title_full_unstemmed Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa
title_sort Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa
author Oliveira, Pedro Antônio de Ávila
author_facet Oliveira, Pedro Antônio de Ávila
author_role author
dc.contributor.none.fl_str_mv Faria, Paulo Rogério de
http://lattes.cnpq.br/9929793565253378
Moraes, Alberto da Silva
http://lattes.cnpq.br/7303349255103658
Silva, Marco Túllio Brazão
http://lattes.cnpq.br/4432379245829336
dc.contributor.author.fl_str_mv Oliveira, Pedro Antônio de Ávila
dc.subject.por.fl_str_mv Leucoplasia bucal
Oral leukoplakia
Diagnóstico
Diagnosis
Inteligência artificial
Artificial intelligence
CNPQ::CIENCIAS BIOLOGICAS::MORFOLOGIA::CITOLOGIA E BIOLOGIA CELULAR
Inteligência artificial
Leucoplasia bucal
Citologia
topic Leucoplasia bucal
Oral leukoplakia
Diagnóstico
Diagnosis
Inteligência artificial
Artificial intelligence
CNPQ::CIENCIAS BIOLOGICAS::MORFOLOGIA::CITOLOGIA E BIOLOGIA CELULAR
Inteligência artificial
Leucoplasia bucal
Citologia
description Squamous cell carcinoma (SCC) of the oral cavity is one of the most common and deadliest head and neck neoplasms. Usually, SCC is preceded by lesions known as oral potentially malignant disorders (OPMDs). Among them, oral leukoplakia (OL) is one of the most prevalent and is characterized clinically by a white lesion and histologically by presenting hyperkeratosis and acanthosis. A variant of LB is a lesion known as proliferative verrucous leukoplakia (PVL), which has a higher malignant transformation rate than others OPMDs. However, the differential diagnosis between them is still a great challenge, in addition to the fact that both may present very similar histopathological aspects, especially in their early stages. Recently, artificial intelligence (AI) has proved to be very useful for the diagnosis and prognosis of malignant neoplasms and other diseases. Studies have shown that computational algorithms can detect tissue changes undetectable to a pathologist, hence helping them diagnose. However, for oral lesions, such as OL and PVL, there are no studies that use such a tool for diagnostic purposes. This study aimed to investigate cell nuclei from OL and PVL lesions through a computer system to elucidate whether this cell compartment is altered between them and a polynomial classifier capable of classifying the two lesions only with the extracted nuclear aspects. Sixty-one and three OL and PVL lesions, respectively, were gathered, and their H&E-stained slides were recovered and photographed for training and computational analysis. Clinicopathological and socio-demographic data were also raised from the requested pathological exam and then tabulated. The Mask R-CNN neural network was applied as a nuclear segmentation method and the polynomial classifier for OL and PVL classification based on the following nuclear information extracted by the network: area, perimeter, eccentricity, orientation, solidity, entropy and Moran Index. Clinicopathological and socio-demographic data from the OL-affected patients revealed that most of them were smokers and males, while the PVL-affected patients were female, and 1/3 underwent a malignant transformation. The neural network employed obtained an average accuracy of 92.95% in the identification of cell nuclei. Significant differences in 11 of the 13 nuclear characteristics studied were observed between OL and PVL, with the averages always higher in the LVP lesions, except for solidity. The polynomial classifier classified the two lesions with an average area under the curve of 97.06%. These data showed that the analysis of the nuclei through computational methods could be an essential tool to aid the diagnosis between OL and PVL lesions.
publishDate 2020
dc.date.none.fl_str_mv 2020-11-12T17:36:54Z
2020-11-12T17:36:54Z
2020-08-28
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv OLIVEIRA, Pedro Antônio de Ávila. Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa. 2020. 90 f. Dissertação (Mestrado em Biologia Celular e Estrutural Aplicadas) - Universidade Federal de Uberlândia, Uberlândia, 2020. DOI http://doi.org/10.14393/ufu.di.2020.710.
https://repositorio.ufu.br/handle/123456789/30359
http://doi.org/10.14393/ufu.di.2020.710
identifier_str_mv OLIVEIRA, Pedro Antônio de Ávila. Uso da inteligência artificial na caracterização nuclear e classificação entre leucoplasia bucal e leucoplasia verrucosa proliferativa. 2020. 90 f. Dissertação (Mestrado em Biologia Celular e Estrutural Aplicadas) - Universidade Federal de Uberlândia, Uberlândia, 2020. DOI http://doi.org/10.14393/ufu.di.2020.710.
url https://repositorio.ufu.br/handle/123456789/30359
http://doi.org/10.14393/ufu.di.2020.710
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/3.0/us/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/3.0/us/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Uberlândia
Brasil
Programa de Pós-graduação em Biologia Celular e Estrutural Aplicadas
publisher.none.fl_str_mv Universidade Federal de Uberlândia
Brasil
Programa de Pós-graduação em Biologia Celular e Estrutural Aplicadas
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFU
instname:Universidade Federal de Uberlândia (UFU)
instacron:UFU
instname_str Universidade Federal de Uberlândia (UFU)
instacron_str UFU
institution UFU
reponame_str Repositório Institucional da UFU
collection Repositório Institucional da UFU
repository.name.fl_str_mv Repositório Institucional da UFU - Universidade Federal de Uberlândia (UFU)
repository.mail.fl_str_mv diinf@dirbi.ufu.br
_version_ 1827843439926968320