Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil
| Ano de defesa: | 2020 |
|---|---|
| Autor(a) principal: | |
| Orientador(a): | |
| Banca de defesa: | |
| Tipo de documento: | Tese |
| Tipo de acesso: | Acesso aberto |
| Idioma: | eng |
| Instituição de defesa: |
Universidade Federal de Viçosa
Fitopatologia |
| Programa de Pós-Graduação: |
Não Informado pela instituição
|
| Departamento: |
Não Informado pela instituição
|
| País: |
Não Informado pela instituição
|
| Palavras-chave em Português: | |
| Link de acesso: | https://locus.ufv.br//handle/123456789/30098 |
Resumo: | Sour rot represents a serious problem in the field and postharvest of fruits and vegetables by limiting production and marketing. Geotrichum candidum has been reported as the main species causing this disease. In this study, 165 fungal isolates causing postharvest rot in different states of Brazil were characterized on the basis of molecular phylogeny and morphology. For molecular characterization, the genomic DNA was extracted, the D1/D2 domain of large subunit rRNA (LSU) gene was amplified and sequenced. The phylogenetic analyses revealed that 129 isolates of this study grouped with the species Geotrichum candidum, while other isolates did not cluster to any known species, probably representing new species. Moreover, other fungal genera, i.e. Hyphopichia, Magnusiomyces, Saccharomycopsis, Trichosporon and Zygoascus were identified associated with the sour rot disease on fruits and vegetables in Brazil. All species tested, including the putative new species, were pathogenic when artificially inoculated on healthy tomato fruit types, Long-self life, Italian tomato and sweet grape, as well as potato tubers and red mombin fruits. In conclusion, although Geotrichum candidum has been related as the only species causing sour rot, other species of Geotrichum and other genera are associated with sour rot on fruits and vegetables in Brazil, which demonstrates a diversity of fungi associated with this disease. Keywords: Dipodascaceae. Geotrichum . Postharvest disease. Rot disease. |
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Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in BrazilFilogenia molecular e caracterização morfológica do agente etiológico da podridão azeda em frutas e hortaliças no BrasilFrutas - Doenças e pragasHortaliças - Doenças e pragasPerdas pós-colheitasPodridãoTaxonomiaFitopatologiaSour rot represents a serious problem in the field and postharvest of fruits and vegetables by limiting production and marketing. Geotrichum candidum has been reported as the main species causing this disease. In this study, 165 fungal isolates causing postharvest rot in different states of Brazil were characterized on the basis of molecular phylogeny and morphology. For molecular characterization, the genomic DNA was extracted, the D1/D2 domain of large subunit rRNA (LSU) gene was amplified and sequenced. The phylogenetic analyses revealed that 129 isolates of this study grouped with the species Geotrichum candidum, while other isolates did not cluster to any known species, probably representing new species. Moreover, other fungal genera, i.e. Hyphopichia, Magnusiomyces, Saccharomycopsis, Trichosporon and Zygoascus were identified associated with the sour rot disease on fruits and vegetables in Brazil. All species tested, including the putative new species, were pathogenic when artificially inoculated on healthy tomato fruit types, Long-self life, Italian tomato and sweet grape, as well as potato tubers and red mombin fruits. In conclusion, although Geotrichum candidum has been related as the only species causing sour rot, other species of Geotrichum and other genera are associated with sour rot on fruits and vegetables in Brazil, which demonstrates a diversity of fungi associated with this disease. Keywords: Dipodascaceae. Geotrichum . Postharvest disease. Rot disease.A podridão azeda representa um problema sério no campo e na pós-colheita de frutas e hortaliças, limitando a produção e a comercialização. Geotrichum candidum tem sido relatado como a principal espécie causando esta doença. Neste estudo, 165 isolados causadores de podridão pós-colheita em diferentes estados do Brasil foram caracterizados com base na filogenia molecular e morfologia. Para caracterização molecular, o DNA genômico foi extraído, e o domínio D1/D2 do gene rRNA da subunidade maior (LSU) foi amplificado e sequenciado. As análises filogenéticas baseadas no domínio D1/D2 revelaram que 129 isolados pertencem a espécie Geotrichum candidum, enquanto outros isolados não agruparam com nenhuma espécie conhecida, provavelmente representando novas espécies. Além disso, outros gêneros, isto é, Hyphopichia, Magnusiomyces, Saccharomycopsis, Trichosporon e Zygoascus, foram identificados associados a podridão azeda em frutas e hortaliças no Brasil. Todas as espécies testadas, incluindo as possíveis espécies novas, foram patogênicas quando inoculadas artificialmente em frutos sadios de tomate do tipo longa vida, italiano e sweet grape, bem como em tubérculos de batata e frutos de seriguela. Em conclusão, embora Geotrichum candidum tenha sido relatado como a única espécie a causar podridão azeda, outras espécies de Geotrichum e outros gêneros estão associados à podridão azeda em frutas e hortaliças no Brasil, o que demonstra uma diversidade de fungos associados a essa doença. Palavras-chave: Dipodascaceae. Geotrichum. Patologia pós-colheita. Podridões.Universidade Federal de ViçosaFitopatologiaPereira, Olinto Liparinihttp://lattes.cnpq.br/4430912256844145Reis, AiltonPaes, Simone Albino2022-10-14T18:53:38Z2022-10-14T18:53:38Z2020-04-30info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfPAES, Simone Albino. Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil. 2020. 71 f. Tese (Doutorado em Fitopatologia) - Universidade Federal de Viçosa, Viçosa. 2020.https://locus.ufv.br//handle/123456789/30098enginfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFV2024-07-12T06:25:29Zoai:locus.ufv.br:123456789/30098Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452024-07-12T06:25:29LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false |
| dc.title.none.fl_str_mv |
Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil Filogenia molecular e caracterização morfológica do agente etiológico da podridão azeda em frutas e hortaliças no Brasil |
| title |
Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil |
| spellingShingle |
Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil Paes, Simone Albino Frutas - Doenças e pragas Hortaliças - Doenças e pragas Perdas pós-colheitas Podridão Taxonomia Fitopatologia |
| title_short |
Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil |
| title_full |
Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil |
| title_fullStr |
Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil |
| title_full_unstemmed |
Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil |
| title_sort |
Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil |
| author |
Paes, Simone Albino |
| author_facet |
Paes, Simone Albino |
| author_role |
author |
| dc.contributor.none.fl_str_mv |
Pereira, Olinto Liparini http://lattes.cnpq.br/4430912256844145 Reis, Ailton |
| dc.contributor.author.fl_str_mv |
Paes, Simone Albino |
| dc.subject.por.fl_str_mv |
Frutas - Doenças e pragas Hortaliças - Doenças e pragas Perdas pós-colheitas Podridão Taxonomia Fitopatologia |
| topic |
Frutas - Doenças e pragas Hortaliças - Doenças e pragas Perdas pós-colheitas Podridão Taxonomia Fitopatologia |
| description |
Sour rot represents a serious problem in the field and postharvest of fruits and vegetables by limiting production and marketing. Geotrichum candidum has been reported as the main species causing this disease. In this study, 165 fungal isolates causing postharvest rot in different states of Brazil were characterized on the basis of molecular phylogeny and morphology. For molecular characterization, the genomic DNA was extracted, the D1/D2 domain of large subunit rRNA (LSU) gene was amplified and sequenced. The phylogenetic analyses revealed that 129 isolates of this study grouped with the species Geotrichum candidum, while other isolates did not cluster to any known species, probably representing new species. Moreover, other fungal genera, i.e. Hyphopichia, Magnusiomyces, Saccharomycopsis, Trichosporon and Zygoascus were identified associated with the sour rot disease on fruits and vegetables in Brazil. All species tested, including the putative new species, were pathogenic when artificially inoculated on healthy tomato fruit types, Long-self life, Italian tomato and sweet grape, as well as potato tubers and red mombin fruits. In conclusion, although Geotrichum candidum has been related as the only species causing sour rot, other species of Geotrichum and other genera are associated with sour rot on fruits and vegetables in Brazil, which demonstrates a diversity of fungi associated with this disease. Keywords: Dipodascaceae. Geotrichum . Postharvest disease. Rot disease. |
| publishDate |
2020 |
| dc.date.none.fl_str_mv |
2020-04-30 2022-10-14T18:53:38Z 2022-10-14T18:53:38Z |
| dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| dc.type.driver.fl_str_mv |
info:eu-repo/semantics/doctoralThesis |
| format |
doctoralThesis |
| status_str |
publishedVersion |
| dc.identifier.uri.fl_str_mv |
PAES, Simone Albino. Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil. 2020. 71 f. Tese (Doutorado em Fitopatologia) - Universidade Federal de Viçosa, Viçosa. 2020. https://locus.ufv.br//handle/123456789/30098 |
| identifier_str_mv |
PAES, Simone Albino. Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil. 2020. 71 f. Tese (Doutorado em Fitopatologia) - Universidade Federal de Viçosa, Viçosa. 2020. |
| url |
https://locus.ufv.br//handle/123456789/30098 |
| dc.language.iso.fl_str_mv |
eng |
| language |
eng |
| dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
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openAccess |
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application/pdf |
| dc.publisher.none.fl_str_mv |
Universidade Federal de Viçosa Fitopatologia |
| publisher.none.fl_str_mv |
Universidade Federal de Viçosa Fitopatologia |
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reponame:LOCUS Repositório Institucional da UFV instname:Universidade Federal de Viçosa (UFV) instacron:UFV |
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Universidade Federal de Viçosa (UFV) |
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UFV |
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UFV |
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LOCUS Repositório Institucional da UFV |
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LOCUS Repositório Institucional da UFV |
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LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV) |
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fabiojreis@ufv.br |
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