Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil

Detalhes bibliográficos
Ano de defesa: 2020
Autor(a) principal: Paes, Simone Albino
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: eng
Instituição de defesa: Universidade Federal de Viçosa
Fitopatologia
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: https://locus.ufv.br//handle/123456789/30098
Resumo: Sour rot represents a serious problem in the field and postharvest of fruits and vegetables by limiting production and marketing. Geotrichum candidum has been reported as the main species causing this disease. In this study, 165 fungal isolates causing postharvest rot in different states of Brazil were characterized on the basis of molecular phylogeny and morphology. For molecular characterization, the genomic DNA was extracted, the D1/D2 domain of large subunit rRNA (LSU) gene was amplified and sequenced. The phylogenetic analyses revealed that 129 isolates of this study grouped with the species Geotrichum candidum, while other isolates did not cluster to any known species, probably representing new species. Moreover, other fungal genera, i.e. Hyphopichia, Magnusiomyces, Saccharomycopsis, Trichosporon and Zygoascus were identified associated with the sour rot disease on fruits and vegetables in Brazil. All species tested, including the putative new species, were pathogenic when artificially inoculated on healthy tomato fruit types, Long-self life, Italian tomato and sweet grape, as well as potato tubers and red mombin fruits. In conclusion, although Geotrichum candidum has been related as the only species causing sour rot, other species of Geotrichum and other genera are associated with sour rot on fruits and vegetables in Brazil, which demonstrates a diversity of fungi associated with this disease. Keywords: Dipodascaceae. Geotrichum . Postharvest disease. Rot disease.
id UFV_94d01993e65e64ca63fe0aed9656a4d0
oai_identifier_str oai:locus.ufv.br:123456789/30098
network_acronym_str UFV
network_name_str LOCUS Repositório Institucional da UFV
repository_id_str
spelling Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in BrazilFilogenia molecular e caracterização morfológica do agente etiológico da podridão azeda em frutas e hortaliças no BrasilFrutas - Doenças e pragasHortaliças - Doenças e pragasPerdas pós-colheitasPodridãoTaxonomiaFitopatologiaSour rot represents a serious problem in the field and postharvest of fruits and vegetables by limiting production and marketing. Geotrichum candidum has been reported as the main species causing this disease. In this study, 165 fungal isolates causing postharvest rot in different states of Brazil were characterized on the basis of molecular phylogeny and morphology. For molecular characterization, the genomic DNA was extracted, the D1/D2 domain of large subunit rRNA (LSU) gene was amplified and sequenced. The phylogenetic analyses revealed that 129 isolates of this study grouped with the species Geotrichum candidum, while other isolates did not cluster to any known species, probably representing new species. Moreover, other fungal genera, i.e. Hyphopichia, Magnusiomyces, Saccharomycopsis, Trichosporon and Zygoascus were identified associated with the sour rot disease on fruits and vegetables in Brazil. All species tested, including the putative new species, were pathogenic when artificially inoculated on healthy tomato fruit types, Long-self life, Italian tomato and sweet grape, as well as potato tubers and red mombin fruits. In conclusion, although Geotrichum candidum has been related as the only species causing sour rot, other species of Geotrichum and other genera are associated with sour rot on fruits and vegetables in Brazil, which demonstrates a diversity of fungi associated with this disease. Keywords: Dipodascaceae. Geotrichum . Postharvest disease. Rot disease.A podridão azeda representa um problema sério no campo e na pós-colheita de frutas e hortaliças, limitando a produção e a comercialização. Geotrichum candidum tem sido relatado como a principal espécie causando esta doença. Neste estudo, 165 isolados causadores de podridão pós-colheita em diferentes estados do Brasil foram caracterizados com base na filogenia molecular e morfologia. Para caracterização molecular, o DNA genômico foi extraído, e o domínio D1/D2 do gene rRNA da subunidade maior (LSU) foi amplificado e sequenciado. As análises filogenéticas baseadas no domínio D1/D2 revelaram que 129 isolados pertencem a espécie Geotrichum candidum, enquanto outros isolados não agruparam com nenhuma espécie conhecida, provavelmente representando novas espécies. Além disso, outros gêneros, isto é, Hyphopichia, Magnusiomyces, Saccharomycopsis, Trichosporon e Zygoascus, foram identificados associados a podridão azeda em frutas e hortaliças no Brasil. Todas as espécies testadas, incluindo as possíveis espécies novas, foram patogênicas quando inoculadas artificialmente em frutos sadios de tomate do tipo longa vida, italiano e sweet grape, bem como em tubérculos de batata e frutos de seriguela. Em conclusão, embora Geotrichum candidum tenha sido relatado como a única espécie a causar podridão azeda, outras espécies de Geotrichum e outros gêneros estão associados à podridão azeda em frutas e hortaliças no Brasil, o que demonstra uma diversidade de fungos associados a essa doença. Palavras-chave: Dipodascaceae. Geotrichum. Patologia pós-colheita. Podridões.Universidade Federal de ViçosaFitopatologiaPereira, Olinto Liparinihttp://lattes.cnpq.br/4430912256844145Reis, AiltonPaes, Simone Albino2022-10-14T18:53:38Z2022-10-14T18:53:38Z2020-04-30info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfPAES, Simone Albino. Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil. 2020. 71 f. Tese (Doutorado em Fitopatologia) - Universidade Federal de Viçosa, Viçosa. 2020.https://locus.ufv.br//handle/123456789/30098enginfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFV2024-07-12T06:25:29Zoai:locus.ufv.br:123456789/30098Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452024-07-12T06:25:29LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.none.fl_str_mv Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil
Filogenia molecular e caracterização morfológica do agente etiológico da podridão azeda em frutas e hortaliças no Brasil
title Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil
spellingShingle Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil
Paes, Simone Albino
Frutas - Doenças e pragas
Hortaliças - Doenças e pragas
Perdas pós-colheitas
Podridão
Taxonomia
Fitopatologia
title_short Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil
title_full Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil
title_fullStr Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil
title_full_unstemmed Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil
title_sort Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil
author Paes, Simone Albino
author_facet Paes, Simone Albino
author_role author
dc.contributor.none.fl_str_mv Pereira, Olinto Liparini
http://lattes.cnpq.br/4430912256844145
Reis, Ailton
dc.contributor.author.fl_str_mv Paes, Simone Albino
dc.subject.por.fl_str_mv Frutas - Doenças e pragas
Hortaliças - Doenças e pragas
Perdas pós-colheitas
Podridão
Taxonomia
Fitopatologia
topic Frutas - Doenças e pragas
Hortaliças - Doenças e pragas
Perdas pós-colheitas
Podridão
Taxonomia
Fitopatologia
description Sour rot represents a serious problem in the field and postharvest of fruits and vegetables by limiting production and marketing. Geotrichum candidum has been reported as the main species causing this disease. In this study, 165 fungal isolates causing postharvest rot in different states of Brazil were characterized on the basis of molecular phylogeny and morphology. For molecular characterization, the genomic DNA was extracted, the D1/D2 domain of large subunit rRNA (LSU) gene was amplified and sequenced. The phylogenetic analyses revealed that 129 isolates of this study grouped with the species Geotrichum candidum, while other isolates did not cluster to any known species, probably representing new species. Moreover, other fungal genera, i.e. Hyphopichia, Magnusiomyces, Saccharomycopsis, Trichosporon and Zygoascus were identified associated with the sour rot disease on fruits and vegetables in Brazil. All species tested, including the putative new species, were pathogenic when artificially inoculated on healthy tomato fruit types, Long-self life, Italian tomato and sweet grape, as well as potato tubers and red mombin fruits. In conclusion, although Geotrichum candidum has been related as the only species causing sour rot, other species of Geotrichum and other genera are associated with sour rot on fruits and vegetables in Brazil, which demonstrates a diversity of fungi associated with this disease. Keywords: Dipodascaceae. Geotrichum . Postharvest disease. Rot disease.
publishDate 2020
dc.date.none.fl_str_mv 2020-04-30
2022-10-14T18:53:38Z
2022-10-14T18:53:38Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv PAES, Simone Albino. Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil. 2020. 71 f. Tese (Doutorado em Fitopatologia) - Universidade Federal de Viçosa, Viçosa. 2020.
https://locus.ufv.br//handle/123456789/30098
identifier_str_mv PAES, Simone Albino. Molecular phylogeny and morphological characterization of the etiological agent of sour rot on fruits and vegetables in Brazil. 2020. 71 f. Tese (Doutorado em Fitopatologia) - Universidade Federal de Viçosa, Viçosa. 2020.
url https://locus.ufv.br//handle/123456789/30098
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Viçosa
Fitopatologia
publisher.none.fl_str_mv Universidade Federal de Viçosa
Fitopatologia
dc.source.none.fl_str_mv reponame:LOCUS Repositório Institucional da UFV
instname:Universidade Federal de Viçosa (UFV)
instacron:UFV
instname_str Universidade Federal de Viçosa (UFV)
instacron_str UFV
institution UFV
reponame_str LOCUS Repositório Institucional da UFV
collection LOCUS Repositório Institucional da UFV
repository.name.fl_str_mv LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)
repository.mail.fl_str_mv fabiojreis@ufv.br
_version_ 1855045584601219072