Caracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)

Detalhes bibliográficos
Ano de defesa: 2007
Autor(a) principal: Pinheiro, Guilherme Luiz
Orientador(a): Fontes, Elizabeth Pacheco Batista lattes
Banca de defesa: Fietto, Juliana Lopes Rangel lattes, Carvalho, Claudine Márcia lattes
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Viçosa
Programa de Pós-Graduação: Mestrado em Bioquímica Agrícola
Departamento: Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal
País: BR
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://locus.ufv.br/handle/123456789/2387
Resumo: The identification of cell signaling pathways in response to different stresses has become a major focus for understanding the molecular bases of plantenvironment interactions. We have previously identified a set of soybean genes co-regulated by ER- and osmotic stresses, which possibly constitute a novel integrative pathway in plants. Among the identified genes, GmATAF2 and GmNAM encode transcription factors from the NAC-family, whose representatives are involved in events of plant development and response to biotic and abiotic stresses. In this study, we demonstrated that the ESTs of GmATAF2 and GmNAM correspond to different regions of the same gene, homologous to Arabidopsis ATAF1 and ATAF2 and named GmATAF. Furthermore, GmATAF transient expression in soybean protoplasts resulted in the repression of the integrative genes and genes specifically induced by dehydration and ER stress, suggesting that GmATAF is a repressor of different stress-responsive pathways in soybean. Given the potential of NAC transfactors as targets for strategies of engineered resistance, in addition to GmATAF, we isolated and characterized other 6 soybean NAC genes (GmNAC1- GmNAC6). The 7 GmNAC genes could be phylogenetically separated into 6 subgroups: ATAF1, ATAF2, NAP, ANAC, NAM and TERN, possibly representing non-redundant NAC genes. Transient expression experiments in tobacco plants revealed that all GmNAC proteins were located in the nucleus, consistent with their roles as transcription factors. Moreover, GmNAC2, GmNAC3 and GmNAC5 proteins exhibited transcriptional activity in yeast. Consistent with a functional diversity suggested by the phylogenetic analysis, the GmNAC genes displayed a differential expression pattern in soybean organs. Using transgenic plants defective for the unfolded protein response (UPR) activation, we demonstrated that activation of GmATAF, GmNAC2 and GmNAC6 genes occurs via an ER-stress signaling pathway distinct from the UPR. The NAC soybean genes are also involved in the response to other abiotic stresses. We demonstrated that GmATAF, GmNAC2, GmNAC3 and GmNAC4 are strongly induced by osmotic stress, though possibly through different pathways. While GmNAC3 and GmNAC4 are also induced by the hormone ABA, the induction of GmATAF and GmNAC2 during osmotic stress seems to be ABA-independent. GmNAC3 and GmNAC4 are also induced by salinity and jasmonic acid, but not by low temperatures. Consistent with an involvement in cell death programs, GmATAF, GmNAC1 and GmNAC6 genes were up-regulated by cell death inducers and repressed by senescence inhibitors. Furthermore, the transient expression of GmNAC1, GmNAC5 and GmNAC6 in tobacco leaves resulted in cell death and enhanced the expression of the senescence gene marker CP1. Gene expression analysis of senescent soybean leaves suggests that GmNAC1 is associated with senescence progression, while GmNAC5 and GmNAC6 is more likely to be involved in other forms of cell death, such as embryo development-induced cell death and the hypersensitive response. Collectively, these results indicate that the characterized NAC genes consist of transcription factors involved in response to different abiotic stresses and take part in cell death events in soybean.
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spelling Pinheiro, Guilherme Luizhttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4750628H3Fietto, Luciano Gomeshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763824H8Loureiro, Marcelo Ehlershttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780851Y3Fontes, Elizabeth Pacheco Batistahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781848H2Fietto, Juliana Lopes Rangelhttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4790238D0Carvalho, Claudine Márciahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4794965T62015-03-26T13:07:21Z2008-03-042015-03-26T13:07:21Z2007-12-14PINHEIRO, Guilherme Luiz. Molecular and functional characterization of the NAC transfactor family from soybean (Glycine max). 2007. 114 f. Dissertação (Mestrado em Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal) - Universidade Federal de Viçosa, Viçosa, 2007.http://locus.ufv.br/handle/123456789/2387The identification of cell signaling pathways in response to different stresses has become a major focus for understanding the molecular bases of plantenvironment interactions. We have previously identified a set of soybean genes co-regulated by ER- and osmotic stresses, which possibly constitute a novel integrative pathway in plants. Among the identified genes, GmATAF2 and GmNAM encode transcription factors from the NAC-family, whose representatives are involved in events of plant development and response to biotic and abiotic stresses. In this study, we demonstrated that the ESTs of GmATAF2 and GmNAM correspond to different regions of the same gene, homologous to Arabidopsis ATAF1 and ATAF2 and named GmATAF. Furthermore, GmATAF transient expression in soybean protoplasts resulted in the repression of the integrative genes and genes specifically induced by dehydration and ER stress, suggesting that GmATAF is a repressor of different stress-responsive pathways in soybean. Given the potential of NAC transfactors as targets for strategies of engineered resistance, in addition to GmATAF, we isolated and characterized other 6 soybean NAC genes (GmNAC1- GmNAC6). The 7 GmNAC genes could be phylogenetically separated into 6 subgroups: ATAF1, ATAF2, NAP, ANAC, NAM and TERN, possibly representing non-redundant NAC genes. Transient expression experiments in tobacco plants revealed that all GmNAC proteins were located in the nucleus, consistent with their roles as transcription factors. Moreover, GmNAC2, GmNAC3 and GmNAC5 proteins exhibited transcriptional activity in yeast. Consistent with a functional diversity suggested by the phylogenetic analysis, the GmNAC genes displayed a differential expression pattern in soybean organs. Using transgenic plants defective for the unfolded protein response (UPR) activation, we demonstrated that activation of GmATAF, GmNAC2 and GmNAC6 genes occurs via an ER-stress signaling pathway distinct from the UPR. The NAC soybean genes are also involved in the response to other abiotic stresses. We demonstrated that GmATAF, GmNAC2, GmNAC3 and GmNAC4 are strongly induced by osmotic stress, though possibly through different pathways. While GmNAC3 and GmNAC4 are also induced by the hormone ABA, the induction of GmATAF and GmNAC2 during osmotic stress seems to be ABA-independent. GmNAC3 and GmNAC4 are also induced by salinity and jasmonic acid, but not by low temperatures. Consistent with an involvement in cell death programs, GmATAF, GmNAC1 and GmNAC6 genes were up-regulated by cell death inducers and repressed by senescence inhibitors. Furthermore, the transient expression of GmNAC1, GmNAC5 and GmNAC6 in tobacco leaves resulted in cell death and enhanced the expression of the senescence gene marker CP1. Gene expression analysis of senescent soybean leaves suggests that GmNAC1 is associated with senescence progression, while GmNAC5 and GmNAC6 is more likely to be involved in other forms of cell death, such as embryo development-induced cell death and the hypersensitive response. Collectively, these results indicate that the characterized NAC genes consist of transcription factors involved in response to different abiotic stresses and take part in cell death events in soybean.A identificação de vias de sinalização de resposta a diferentes estresses constitui um dos interesses majoritários de pesquisas na área de interações das plantas com o meio ambiente. Recentemente, foram identificados por nosso grupo genes de soja co-regulados por estresse osmótico e estresse no retículo, que possivelmente fazem parte de uma via integrativa inédita em plantas. Dentre os genes identificados, destacam-se GmATAF2 e GmNAM, que codificam transfatores da família NAC, cujos representantes estão envolvidos em eventos de desenvolvimento vegetal e na resposta a estresses bióticos e abióticos. Nesta investigação, foi demonstrado que as ESTs de GmATAF2 e GmNAM correspondem a regiões distintas de um mesmo gene, homólogo a ATAF1 e ATAF2 de Arabidopsis e denominado GmATAF. Além disso, a expressão transiente de GmATAF em protoplastos de soja resultou na repressão de genes da via integrativa e de genes especificamente induzidos por estresse hídrico e do retículo, sugerindo que GmATAF seja um repressor de vias de resposta a diferentes estresses em soja. Diante do potencial dos transfatores NAC como alvos para estratégias de resistência engenheirada, foram, além de GmATAF, isolados e caracterizados outros 6 genes NACs de soja (GmNAC1-GmNAC6). Os 7 genes GmNACs puderam ser filogeneticamente separados em 6 subgrupos: ATAF1, ATAF2, NAP, ANAC, NAM e TERN, constituindo possivelmente genes NACs funcionalmente não-redundantes. Ensaios de expressão transiente em tabaco revelaram que todas as proteínas GmNAC localizam-se no núcleo, consistentemente com a atuação como fatores de transcrição. Além disso, as proteínas GmNAC2, GmNAC3 e GmNAC5 exibiram capacidade de ativação transcricional em leveduras. Consistentemente com a heterogeneidade funcional sugerida pelo agrupamento filogenético, a análise do padrão de expressão dos genes GmNACs revelou uma expressão diferencial em órgãos de soja. Utilizando plantas transgênicas defeituosas na ativação da via de resposta a proteínas mal dobradas no RE (via UPR), foi demonstrado que a ativação dos genes GmATAF, GmNAC2 e GmNAC6 é sinalizada por estresses no RE por meio de uma via distinta da UPR. Os genes NACs de soja também estão envolvidos na resposta a outros estresses abióticos. Foi demonstrado que GmATAF, GmNAC2, GmNAC3 e GmNAC4 são fortemente induzidos por estresse osmótico, mas possivelmente em vias distintas, pois enquanto GmNAC3 e GmNAC4 são também induzidos pelo hormônio ABA, a indução de GmATAF e GmNAC2 durante o estresse osmótico parece ser independente de ABA. GmNAC3 e GmNAC4 são induzidos também por estresse salino e por ácido jasmônico, mas não por baixas temperaturas. Consistentemente com o envolvimento em morte celular, os genes GmATAF, GmNAC1 e GmNAC6 são induzidos por indutores de morte celular e reprimidos por inibidores de senescência. Além disso, a expressão transiente de GmNAC1, GmNAC5 e GmNAC6 em folhas de tabaco resultou em morte celular e ativou a expressão do gene marcador de senescência CP1. A análise da expressão gênica em folhas de soja senescentes sugere que, enquanto GmNAC1 está associado à progressão da senescência, GmNAC5 e GmNAC6 induzem outras formas de morte celular, como as que ocorrem durante o desenvolvimento do embrião e na reposta hipersensível. Coletivamente, estes resultados indicam que os genes NACs caracterizados constituem fatores de transcrição envolvidos na resposta a estresses abióticos e participam em eventos de morte celular em soja.Coordenação de Aperfeiçoamento de Pessoal de Nível Superiorapplication/pdfporUniversidade Federal de ViçosaMestrado em Bioquímica AgrícolaUFVBRBioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animalSojaRegulação de expressão gênicaEfeito do stressSoybeanGene expression regulationStress effectCNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULARCaracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)Molecular and functional characterization of the NAC transfactor family from soybean (Glycine max)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf1078726https://locus.ufv.br//bitstream/123456789/2387/1/texto%20completo.pdf174a0b0adc7fa262786ef457229defe6MD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain176524https://locus.ufv.br//bitstream/123456789/2387/2/texto%20completo.pdf.txta0024a2482025db9561b85a268690141MD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3597https://locus.ufv.br//bitstream/123456789/2387/3/texto%20completo.pdf.jpgc48cabb8e474ff4581e48bccb7ba88a3MD53123456789/23872016-04-06 23:11:03.958oai:locus.ufv.br:123456789/2387Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-07T02:11:03LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Caracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)
dc.title.alternative.eng.fl_str_mv Molecular and functional characterization of the NAC transfactor family from soybean (Glycine max)
title Caracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)
spellingShingle Caracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)
Pinheiro, Guilherme Luiz
Soja
Regulação de expressão gênica
Efeito do stress
Soybean
Gene expression regulation
Stress effect
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
title_short Caracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)
title_full Caracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)
title_fullStr Caracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)
title_full_unstemmed Caracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)
title_sort Caracterização molecular e funcional de transfatores da família NAC de soja (Glycine max)
author Pinheiro, Guilherme Luiz
author_facet Pinheiro, Guilherme Luiz
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4750628H3
dc.contributor.author.fl_str_mv Pinheiro, Guilherme Luiz
dc.contributor.advisor-co1.fl_str_mv Fietto, Luciano Gomes
dc.contributor.advisor-co1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763824H8
dc.contributor.advisor-co2.fl_str_mv Loureiro, Marcelo Ehlers
dc.contributor.advisor-co2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780851Y3
dc.contributor.advisor1.fl_str_mv Fontes, Elizabeth Pacheco Batista
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781848H2
dc.contributor.referee1.fl_str_mv Fietto, Juliana Lopes Rangel
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4790238D0
dc.contributor.referee2.fl_str_mv Carvalho, Claudine Márcia
dc.contributor.referee2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4794965T6
contributor_str_mv Fietto, Luciano Gomes
Loureiro, Marcelo Ehlers
Fontes, Elizabeth Pacheco Batista
Fietto, Juliana Lopes Rangel
Carvalho, Claudine Márcia
dc.subject.por.fl_str_mv Soja
Regulação de expressão gênica
Efeito do stress
topic Soja
Regulação de expressão gênica
Efeito do stress
Soybean
Gene expression regulation
Stress effect
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
dc.subject.eng.fl_str_mv Soybean
Gene expression regulation
Stress effect
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
description The identification of cell signaling pathways in response to different stresses has become a major focus for understanding the molecular bases of plantenvironment interactions. We have previously identified a set of soybean genes co-regulated by ER- and osmotic stresses, which possibly constitute a novel integrative pathway in plants. Among the identified genes, GmATAF2 and GmNAM encode transcription factors from the NAC-family, whose representatives are involved in events of plant development and response to biotic and abiotic stresses. In this study, we demonstrated that the ESTs of GmATAF2 and GmNAM correspond to different regions of the same gene, homologous to Arabidopsis ATAF1 and ATAF2 and named GmATAF. Furthermore, GmATAF transient expression in soybean protoplasts resulted in the repression of the integrative genes and genes specifically induced by dehydration and ER stress, suggesting that GmATAF is a repressor of different stress-responsive pathways in soybean. Given the potential of NAC transfactors as targets for strategies of engineered resistance, in addition to GmATAF, we isolated and characterized other 6 soybean NAC genes (GmNAC1- GmNAC6). The 7 GmNAC genes could be phylogenetically separated into 6 subgroups: ATAF1, ATAF2, NAP, ANAC, NAM and TERN, possibly representing non-redundant NAC genes. Transient expression experiments in tobacco plants revealed that all GmNAC proteins were located in the nucleus, consistent with their roles as transcription factors. Moreover, GmNAC2, GmNAC3 and GmNAC5 proteins exhibited transcriptional activity in yeast. Consistent with a functional diversity suggested by the phylogenetic analysis, the GmNAC genes displayed a differential expression pattern in soybean organs. Using transgenic plants defective for the unfolded protein response (UPR) activation, we demonstrated that activation of GmATAF, GmNAC2 and GmNAC6 genes occurs via an ER-stress signaling pathway distinct from the UPR. The NAC soybean genes are also involved in the response to other abiotic stresses. We demonstrated that GmATAF, GmNAC2, GmNAC3 and GmNAC4 are strongly induced by osmotic stress, though possibly through different pathways. While GmNAC3 and GmNAC4 are also induced by the hormone ABA, the induction of GmATAF and GmNAC2 during osmotic stress seems to be ABA-independent. GmNAC3 and GmNAC4 are also induced by salinity and jasmonic acid, but not by low temperatures. Consistent with an involvement in cell death programs, GmATAF, GmNAC1 and GmNAC6 genes were up-regulated by cell death inducers and repressed by senescence inhibitors. Furthermore, the transient expression of GmNAC1, GmNAC5 and GmNAC6 in tobacco leaves resulted in cell death and enhanced the expression of the senescence gene marker CP1. Gene expression analysis of senescent soybean leaves suggests that GmNAC1 is associated with senescence progression, while GmNAC5 and GmNAC6 is more likely to be involved in other forms of cell death, such as embryo development-induced cell death and the hypersensitive response. Collectively, these results indicate that the characterized NAC genes consist of transcription factors involved in response to different abiotic stresses and take part in cell death events in soybean.
publishDate 2007
dc.date.issued.fl_str_mv 2007-12-14
dc.date.available.fl_str_mv 2008-03-04
2015-03-26T13:07:21Z
dc.date.accessioned.fl_str_mv 2015-03-26T13:07:21Z
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dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv PINHEIRO, Guilherme Luiz. Molecular and functional characterization of the NAC transfactor family from soybean (Glycine max). 2007. 114 f. Dissertação (Mestrado em Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal) - Universidade Federal de Viçosa, Viçosa, 2007.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/2387
identifier_str_mv PINHEIRO, Guilherme Luiz. Molecular and functional characterization of the NAC transfactor family from soybean (Glycine max). 2007. 114 f. Dissertação (Mestrado em Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal) - Universidade Federal de Viçosa, Viçosa, 2007.
url http://locus.ufv.br/handle/123456789/2387
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dc.publisher.program.fl_str_mv Mestrado em Bioquímica Agrícola
dc.publisher.initials.fl_str_mv UFV
dc.publisher.country.fl_str_mv BR
dc.publisher.department.fl_str_mv Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal
publisher.none.fl_str_mv Universidade Federal de Viçosa
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