Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol
| Ano de defesa: | 2017 |
|---|---|
| Autor(a) principal: | |
| Orientador(a): | |
| Banca de defesa: | , |
| Tipo de documento: | Dissertação |
| Tipo de acesso: | Acesso aberto |
| Idioma: | por |
| Instituição de defesa: |
Universidade Federal de Alfenas
|
| Programa de Pós-Graduação: |
Programa de Pós-Graduação em Ciências Farmacêuticas
|
| Departamento: |
Faculdade de Ciências Farmacêuticas
|
| País: |
Brasil
|
| Palavras-chave em Português: | |
| Área do conhecimento CNPq: | |
| Link de acesso: | https://repositorio.unifal-mg.edu.br/handle/123456789/1013 |
Resumo: | Leishmaniasis is a neglected pathology with a high incidence worldwide, constituting a governmental health problem in Minas Gerais and in the whole country as well, because of the high degree of morbidity and mortality and a scarce therapeutic arsenal. There are enzymes essential for cell growth and viability of Leishmania that are investigated as targets for new drugs. This thesis aimed to identify compounds that had leishmanicidal activity, using Molecular Modeling and Bioinformatics tools, followed by synthesis and in vitro evaluation of its pharmacological activity. The aim of the Molecular Modeling study is to evaluate the interaction of the compounds with some biological targets (CRK3, trypanothione synthetase, arginase and rCPB2.8 enzymes). The three-dimensional structures of the CRK3 and rCPB2.8 enzymes were predicted by homology modeling, since there are no crystal structures of these proteins deposited in a database. The crystallographic structures of the arginase and trypanothione synthase proteins were obtained from the Protein Data Bank (PDB). The planning of a simple and reproducible synthetic route was taken into account in the production of these substances. The Mannich base esters bearing different substituents at the para-disubstituted ring moiety were investigated, varying the substituents with electron donating groups as well as electron withdrawing groups of different electronegativity. The new substances were structurally elucidated using spectroscopic tools. The study of pharmacological activity made it possible to verify that the compounds SBM2, SBM3, SBM4, SBM5, SBM8, SBM11 and SBM13 have antipromastigote activity, and only the compound SBM3 showed inhibitory activity on the enzyme rCPB2.8 in the concentration of 100 μM. Activation of the enzyme rCPB2.8 exerted by intermediates 2, SBM4, SBM8 and SBM9 was also verified, which may be related to the interaction of these compounds in an allosteric site. Among the studied binding pockets in the surface of the rCPB2.8, one presented an interaction profile similar to that observed by in vitro studies, located in the region of the lysine residue LYS159, close to the active site. |
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Coelho, Camila De Moraishttp://lattes.cnpq.br/0035685068777352Carvalho, Diogo TeixeiraJúdice, Wagner Alves De SouzaDias, Danielle FerreiraVeloso, Márcia Paranhohttp://lattes.cnpq.br/25847311887915272017-09-18T19:48:32Z2017-08-04COELHO, Camila de Morais. Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol. 2017. 173 f. Dissertação (Mestrado em Ciências Farmacêuticas) - Universidade Federal de Alfenas, Alfenas, MG, 2017 .https://repositorio.unifal-mg.edu.br/handle/123456789/1013Leishmaniasis is a neglected pathology with a high incidence worldwide, constituting a governmental health problem in Minas Gerais and in the whole country as well, because of the high degree of morbidity and mortality and a scarce therapeutic arsenal. There are enzymes essential for cell growth and viability of Leishmania that are investigated as targets for new drugs. This thesis aimed to identify compounds that had leishmanicidal activity, using Molecular Modeling and Bioinformatics tools, followed by synthesis and in vitro evaluation of its pharmacological activity. The aim of the Molecular Modeling study is to evaluate the interaction of the compounds with some biological targets (CRK3, trypanothione synthetase, arginase and rCPB2.8 enzymes). The three-dimensional structures of the CRK3 and rCPB2.8 enzymes were predicted by homology modeling, since there are no crystal structures of these proteins deposited in a database. The crystallographic structures of the arginase and trypanothione synthase proteins were obtained from the Protein Data Bank (PDB). The planning of a simple and reproducible synthetic route was taken into account in the production of these substances. The Mannich base esters bearing different substituents at the para-disubstituted ring moiety were investigated, varying the substituents with electron donating groups as well as electron withdrawing groups of different electronegativity. The new substances were structurally elucidated using spectroscopic tools. The study of pharmacological activity made it possible to verify that the compounds SBM2, SBM3, SBM4, SBM5, SBM8, SBM11 and SBM13 have antipromastigote activity, and only the compound SBM3 showed inhibitory activity on the enzyme rCPB2.8 in the concentration of 100 μM. Activation of the enzyme rCPB2.8 exerted by intermediates 2, SBM4, SBM8 and SBM9 was also verified, which may be related to the interaction of these compounds in an allosteric site. Among the studied binding pockets in the surface of the rCPB2.8, one presented an interaction profile similar to that observed by in vitro studies, located in the region of the lysine residue LYS159, close to the active site.A Leishmaniose consiste em uma patologia negligenciada com elevada incidência mundial, constituindo um problema de saúde pública em Minas Gerais e em todo Brasil por apresentar um alto grau de morbidade e mortalidade e um escasso arsenal terapêutico. Os parasitos da espécie Leishmania possuem enzimas essenciais ao crescimento e à viabilidade celular que podem ser investigadas como alvo de novos fármacos. Esta dissertação buscou identificar moléculas bioativas que apresentem um perfil de afinidade em alvos moleculares relacionados à Leishmaniose, utilizando as ferramentas da Modelagem Molecular e da Bioinformática, seguido de síntese destas substâncias candidatas a fármacos leishmanicidas e avaliação in vitro. Os estudos de Modelagem Molecular avaliaram os perfis de afinidade de uma série de derivados do eugenol proposta com alvos biológicos selecionados, entre elas as enzimas de Leishmania CRK3, tripanotiona sintetase, arginase e cisteíno protease rCPB2.8, por meio de ancoramento molecular. As enzimas CRK3 e cisteíno protease rCPB2.8 foram prevista pela técnica de modelagem por homologia utilizando um modelo e multiplos modelos, respectivamente, devido à ausência de uma estrutura cristalográfica desta proteína em banco de dados. As estruturas cristalográficas das proteínas arginase e tripanotiona sintetase foram obtidas no banco de dados Protein Data Bank (PDB). Para a obtenção dessas novas substâncias químicas levou-se em consideração o planejamento de uma rota sintética simples e reprodutível. Foi obtido uma série de ésteres de base de Mannich do eugenol, compostos contendo como substituintes grupamentos doadores de elétrons bem como grupamentos retiradores de elétrons e de diferente eletronegatividade e volume. As novas substâncias foram elucidadas estruturalmente utilizando ferramentas espectroscópicas. O estudo de atividade farmacológica permitiu verificar que os compostos SBM2, SBM3, SBM4, SBM5, SBM8, SBM11 e SBM13 possuem atividade leishmanicida antipromastigota, e apenas o composto SBM3 apresentou atividade inibitória satisfatória sobre a enzima rCPB2.8 na concentração de 100 μM. Foi verificado também o aumento da atividade da enzima rCPB2.8 exercida pelos compostos intermediário 2, SBM4, SBM8 e SBM9, que pode estar relacionada com a interação destes compostos em um sítio alostérico. Dentre as cavidades estudadas presentes na superfície da enzima rCPB2.8, uma possível região de interação com micromoléculas, localizada próxima ao resíduo de LYS159, apresentou um perfil de interação com os compostos similar ao observado nos estudos in vitro.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfporUniversidade Federal de AlfenasPrograma de Pós-Graduação em Ciências FarmacêuticasUNIFAL-MGBrasilFaculdade de Ciências Farmacêuticasinfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/4.0/LeishmanioseBiologia ComputacionalÉsteresBases de MannichQUIMICA ORGANICA::SINTESE ORGANICADesenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenolinfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/publishedVersion-6425845155986244297600600600-88577489912235778912075167498588264571reponame:Repositório Institucional da Universidade Federal de Alfenas - RiUnifalinstname:Universidade Federal de Alfenas (UNIFAL)instacron:UNIFALCoelho, Camila De MoraisLICENSElicense.txtlicense.txttext/plain; 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| dc.title.pt-BR.fl_str_mv |
Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol |
| title |
Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol |
| spellingShingle |
Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol Coelho, Camila De Morais Leishmaniose Biologia Computacional Ésteres Bases de Mannich QUIMICA ORGANICA::SINTESE ORGANICA |
| title_short |
Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol |
| title_full |
Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol |
| title_fullStr |
Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol |
| title_full_unstemmed |
Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol |
| title_sort |
Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol |
| author |
Coelho, Camila De Morais |
| author_facet |
Coelho, Camila De Morais |
| author_role |
author |
| dc.contributor.author.fl_str_mv |
Coelho, Camila De Morais |
| dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/0035685068777352 |
| dc.contributor.advisor-co1.fl_str_mv |
Carvalho, Diogo Teixeira |
| dc.contributor.referee1.fl_str_mv |
Júdice, Wagner Alves De Souza |
| dc.contributor.referee2.fl_str_mv |
Dias, Danielle Ferreira |
| dc.contributor.advisor1.fl_str_mv |
Veloso, Márcia Paranho |
| dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/2584731188791527 |
| contributor_str_mv |
Carvalho, Diogo Teixeira Júdice, Wagner Alves De Souza Dias, Danielle Ferreira Veloso, Márcia Paranho |
| dc.subject.por.fl_str_mv |
Leishmaniose Biologia Computacional Ésteres Bases de Mannich |
| topic |
Leishmaniose Biologia Computacional Ésteres Bases de Mannich QUIMICA ORGANICA::SINTESE ORGANICA |
| dc.subject.cnpq.fl_str_mv |
QUIMICA ORGANICA::SINTESE ORGANICA |
| description |
Leishmaniasis is a neglected pathology with a high incidence worldwide, constituting a governmental health problem in Minas Gerais and in the whole country as well, because of the high degree of morbidity and mortality and a scarce therapeutic arsenal. There are enzymes essential for cell growth and viability of Leishmania that are investigated as targets for new drugs. This thesis aimed to identify compounds that had leishmanicidal activity, using Molecular Modeling and Bioinformatics tools, followed by synthesis and in vitro evaluation of its pharmacological activity. The aim of the Molecular Modeling study is to evaluate the interaction of the compounds with some biological targets (CRK3, trypanothione synthetase, arginase and rCPB2.8 enzymes). The three-dimensional structures of the CRK3 and rCPB2.8 enzymes were predicted by homology modeling, since there are no crystal structures of these proteins deposited in a database. The crystallographic structures of the arginase and trypanothione synthase proteins were obtained from the Protein Data Bank (PDB). The planning of a simple and reproducible synthetic route was taken into account in the production of these substances. The Mannich base esters bearing different substituents at the para-disubstituted ring moiety were investigated, varying the substituents with electron donating groups as well as electron withdrawing groups of different electronegativity. The new substances were structurally elucidated using spectroscopic tools. The study of pharmacological activity made it possible to verify that the compounds SBM2, SBM3, SBM4, SBM5, SBM8, SBM11 and SBM13 have antipromastigote activity, and only the compound SBM3 showed inhibitory activity on the enzyme rCPB2.8 in the concentration of 100 μM. Activation of the enzyme rCPB2.8 exerted by intermediates 2, SBM4, SBM8 and SBM9 was also verified, which may be related to the interaction of these compounds in an allosteric site. Among the studied binding pockets in the surface of the rCPB2.8, one presented an interaction profile similar to that observed by in vitro studies, located in the region of the lysine residue LYS159, close to the active site. |
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2017 |
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2017-09-18T19:48:32Z |
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2017-08-04 |
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info:eu-repo/semantics/masterThesis |
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info:eu-repo/semantics/publishedVersion |
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masterThesis |
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publishedVersion |
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COELHO, Camila de Morais. Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol. 2017. 173 f. Dissertação (Mestrado em Ciências Farmacêuticas) - Universidade Federal de Alfenas, Alfenas, MG, 2017 . |
| dc.identifier.uri.fl_str_mv |
https://repositorio.unifal-mg.edu.br/handle/123456789/1013 |
| identifier_str_mv |
COELHO, Camila de Morais. Desenvolvimento de protótipos leishmanicidas: estudos computacionais por modelagem molecular, síntese química e avaliação farmacológica de novos derivados do eugenol. 2017. 173 f. Dissertação (Mestrado em Ciências Farmacêuticas) - Universidade Federal de Alfenas, Alfenas, MG, 2017 . |
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https://repositorio.unifal-mg.edu.br/handle/123456789/1013 |
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por |
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600 600 600 |
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info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-nd/4.0/ |
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http://creativecommons.org/licenses/by-nc-nd/4.0/ |
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Universidade Federal de Alfenas |
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Programa de Pós-Graduação em Ciências Farmacêuticas |
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UNIFAL-MG |
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Brasil |
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Faculdade de Ciências Farmacêuticas |
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Universidade Federal de Alfenas |
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Repositório Institucional da Universidade Federal de Alfenas - RiUnifal |
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https://repositorio.unifal-mg.edu.br/bitstreams/8cf03a12-3613-4d9c-b5c1-217c6ac747db/download https://repositorio.unifal-mg.edu.br/bitstreams/ac0e8a95-c140-4a4c-a7da-3c579641d169/download https://repositorio.unifal-mg.edu.br/bitstreams/2c605b85-ca37-4705-9553-e86546ba7337/download https://repositorio.unifal-mg.edu.br/bitstreams/a4fb8edf-24ff-4bf8-a9a0-a181c849e405/download https://repositorio.unifal-mg.edu.br/bitstreams/c499e6bb-5f00-460d-aeca-b8cce3f12d72/download https://repositorio.unifal-mg.edu.br/bitstreams/a265598c-0602-4de0-be9a-dce413713e11/download https://repositorio.unifal-mg.edu.br/bitstreams/bca84e07-1e6e-475c-891e-0207c6482f34/download |
| bitstream.checksum.fl_str_mv |
31555718c4fc75849dd08f27935d4f6b 4afdbb8c545fd630ea7db775da747b2f d41d8cd98f00b204e9800998ecf8427e d41d8cd98f00b204e9800998ecf8427e 4e45d496235f158a0508797f335c6a83 94c97cb6ed95bb4e8d929dcfa1d6b34d 47c546a675eca90dc3a0cb3461bf83ce |
| bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 MD5 MD5 MD5 |
| repository.name.fl_str_mv |
Repositório Institucional da Universidade Federal de Alfenas - RiUnifal - Universidade Federal de Alfenas (UNIFAL) |
| repository.mail.fl_str_mv |
repositorio@unifal-mg.edu.br |
| _version_ |
1859830895634022400 |