Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real
| Ano de defesa: | 2013 |
|---|---|
| Autor(a) principal: | |
| Orientador(a): | |
| Banca de defesa: | |
| Tipo de documento: | Tese |
| Tipo de acesso: | Acesso aberto |
| Idioma: | por |
| Instituição de defesa: |
Universidade Estadual Paulista (Unesp)
|
| Programa de Pós-Graduação: |
Não Informado pela instituição
|
| Departamento: |
Não Informado pela instituição
|
| País: |
Não Informado pela instituição
|
| Palavras-chave em Português: | |
| Link de acesso: | http://hdl.handle.net/11449/108461 |
Resumo: | Cryptosporidium serpentis infection is common in reptiles, especially snakes, and is characterized by chronic infection with severe hypertrophic gastritis, which can be lethal. This research aimed to use the real- time polymerase chain reaction (PCR) targeting the heat shock protein gene (Hsp70) for detection of C. serpentis in fecal samples of 503 snakes, and to determine its analytical and epidemiological specificity and sensitivity using, as a gold standard, the nested PCR targeting the 18S rRNA (18S rRNA) gene followed by sequencing of the amplified fragments (nPCR/S). The real-time PCR was positive for C. serpentis in 17 samples (3.37%), and nPCR/S resulted in positive results for C. serpentis in 15 samples (2.98%). It was also observed that the nPCR/S was positive for Cryptosporidium spp. in 60 samples (11.98%). Sequencing of the fragments amplified by nPCR was possible in 38 samples, and resulted in the identification of Cryptosporidium tyzzeri, Cryptosporidium muris, Cryptosporidium varanii and C. serpentis in several species of snakes. The sensitivity and specificity of real-time PCR were, respectively, 93.8% and 99.5%. Although three samples were positive for C. serpentis only by real-time PCR, and were considered as false positive results in the estimation of the epidemiological specificity and sensitivity, the melting curve analysis indicated that these samples had the same melting temperature of the C. serpentis samples. Thus, we conclude that real-time PCR targeting the gene Hsp70 is a sensitive and specific method for the detection of C. serpentis in fecal samples from snakes |
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Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo realCryptosporidiumDiagnóstico molecularEpidemiologiaReptilCobraReação em cadeia de polimeraseCryptosporidium serpentisCryptosporidium serpentis infection is common in reptiles, especially snakes, and is characterized by chronic infection with severe hypertrophic gastritis, which can be lethal. This research aimed to use the real- time polymerase chain reaction (PCR) targeting the heat shock protein gene (Hsp70) for detection of C. serpentis in fecal samples of 503 snakes, and to determine its analytical and epidemiological specificity and sensitivity using, as a gold standard, the nested PCR targeting the 18S rRNA (18S rRNA) gene followed by sequencing of the amplified fragments (nPCR/S). The real-time PCR was positive for C. serpentis in 17 samples (3.37%), and nPCR/S resulted in positive results for C. serpentis in 15 samples (2.98%). It was also observed that the nPCR/S was positive for Cryptosporidium spp. in 60 samples (11.98%). Sequencing of the fragments amplified by nPCR was possible in 38 samples, and resulted in the identification of Cryptosporidium tyzzeri, Cryptosporidium muris, Cryptosporidium varanii and C. serpentis in several species of snakes. The sensitivity and specificity of real-time PCR were, respectively, 93.8% and 99.5%. Although three samples were positive for C. serpentis only by real-time PCR, and were considered as false positive results in the estimation of the epidemiological specificity and sensitivity, the melting curve analysis indicated that these samples had the same melting temperature of the C. serpentis samples. Thus, we conclude that real-time PCR targeting the gene Hsp70 is a sensitive and specific method for the detection of C. serpentis in fecal samples from snakesFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)FAPESP: 07/54312-2Universidade Estadual Paulista (Unesp)Meireles, Marcelo VasconcelosUniversidade Estadual Paulista (Unesp)Silva, Deuvânia Carvalho da [UNESP]2014-08-13T14:50:38Z2014-08-13T14:50:38Z2013-11-27info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis78 f.application/pdfSILVA, Deuvânia Carvalho da. Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real. 2013. 78 f. Tese (doutorado) - Universidade Estadual Paulista Júlio de Mesquita Filho, Faculdade de Medicina Veterinária de Araçatuba, 2013.http://hdl.handle.net/11449/108461000744257000744257.pdf33004021075P8Alephreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPporinfo:eu-repo/semantics/openAccess2025-06-07T05:19:53Zoai:repositorio.unesp.br:11449/108461Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-06-07T05:19:53Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
| dc.title.none.fl_str_mv |
Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real |
| title |
Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real |
| spellingShingle |
Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real Silva, Deuvânia Carvalho da [UNESP] Cryptosporidium Diagnóstico molecular Epidemiologia Reptil Cobra Reação em cadeia de polimerase Cryptosporidium serpentis |
| title_short |
Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real |
| title_full |
Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real |
| title_fullStr |
Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real |
| title_full_unstemmed |
Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real |
| title_sort |
Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real |
| author |
Silva, Deuvânia Carvalho da [UNESP] |
| author_facet |
Silva, Deuvânia Carvalho da [UNESP] |
| author_role |
author |
| dc.contributor.none.fl_str_mv |
Meireles, Marcelo Vasconcelos Universidade Estadual Paulista (Unesp) |
| dc.contributor.author.fl_str_mv |
Silva, Deuvânia Carvalho da [UNESP] |
| dc.subject.por.fl_str_mv |
Cryptosporidium Diagnóstico molecular Epidemiologia Reptil Cobra Reação em cadeia de polimerase Cryptosporidium serpentis |
| topic |
Cryptosporidium Diagnóstico molecular Epidemiologia Reptil Cobra Reação em cadeia de polimerase Cryptosporidium serpentis |
| description |
Cryptosporidium serpentis infection is common in reptiles, especially snakes, and is characterized by chronic infection with severe hypertrophic gastritis, which can be lethal. This research aimed to use the real- time polymerase chain reaction (PCR) targeting the heat shock protein gene (Hsp70) for detection of C. serpentis in fecal samples of 503 snakes, and to determine its analytical and epidemiological specificity and sensitivity using, as a gold standard, the nested PCR targeting the 18S rRNA (18S rRNA) gene followed by sequencing of the amplified fragments (nPCR/S). The real-time PCR was positive for C. serpentis in 17 samples (3.37%), and nPCR/S resulted in positive results for C. serpentis in 15 samples (2.98%). It was also observed that the nPCR/S was positive for Cryptosporidium spp. in 60 samples (11.98%). Sequencing of the fragments amplified by nPCR was possible in 38 samples, and resulted in the identification of Cryptosporidium tyzzeri, Cryptosporidium muris, Cryptosporidium varanii and C. serpentis in several species of snakes. The sensitivity and specificity of real-time PCR were, respectively, 93.8% and 99.5%. Although three samples were positive for C. serpentis only by real-time PCR, and were considered as false positive results in the estimation of the epidemiological specificity and sensitivity, the melting curve analysis indicated that these samples had the same melting temperature of the C. serpentis samples. Thus, we conclude that real-time PCR targeting the gene Hsp70 is a sensitive and specific method for the detection of C. serpentis in fecal samples from snakes |
| publishDate |
2013 |
| dc.date.none.fl_str_mv |
2013-11-27 2014-08-13T14:50:38Z 2014-08-13T14:50:38Z |
| dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| dc.type.driver.fl_str_mv |
info:eu-repo/semantics/doctoralThesis |
| format |
doctoralThesis |
| status_str |
publishedVersion |
| dc.identifier.uri.fl_str_mv |
SILVA, Deuvânia Carvalho da. Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real. 2013. 78 f. Tese (doutorado) - Universidade Estadual Paulista Júlio de Mesquita Filho, Faculdade de Medicina Veterinária de Araçatuba, 2013. http://hdl.handle.net/11449/108461 000744257 000744257.pdf 33004021075P8 |
| identifier_str_mv |
SILVA, Deuvânia Carvalho da. Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real. 2013. 78 f. Tese (doutorado) - Universidade Estadual Paulista Júlio de Mesquita Filho, Faculdade de Medicina Veterinária de Araçatuba, 2013. 000744257 000744257.pdf 33004021075P8 |
| url |
http://hdl.handle.net/11449/108461 |
| dc.language.iso.fl_str_mv |
por |
| language |
por |
| dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
| eu_rights_str_mv |
openAccess |
| dc.format.none.fl_str_mv |
78 f. application/pdf |
| dc.publisher.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
| publisher.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
| dc.source.none.fl_str_mv |
Aleph reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
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Universidade Estadual Paulista (UNESP) |
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UNESP |
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UNESP |
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Repositório Institucional da UNESP |
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Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
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repositoriounesp@unesp.br |
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1854955141902368768 |