Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real

Detalhes bibliográficos
Ano de defesa: 2013
Autor(a) principal: Silva, Deuvânia Carvalho da [UNESP]
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Estadual Paulista (Unesp)
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: http://hdl.handle.net/11449/108461
Resumo: Cryptosporidium serpentis infection is common in reptiles, especially snakes, and is characterized by chronic infection with severe hypertrophic gastritis, which can be lethal. This research aimed to use the real- time polymerase chain reaction (PCR) targeting the heat shock protein gene (Hsp70) for detection of C. serpentis in fecal samples of 503 snakes, and to determine its analytical and epidemiological specificity and sensitivity using, as a gold standard, the nested PCR targeting the 18S rRNA (18S rRNA) gene followed by sequencing of the amplified fragments (nPCR/S). The real-time PCR was positive for C. serpentis in 17 samples (3.37%), and nPCR/S resulted in positive results for C. serpentis in 15 samples (2.98%). It was also observed that the nPCR/S was positive for Cryptosporidium spp. in 60 samples (11.98%). Sequencing of the fragments amplified by nPCR was possible in 38 samples, and resulted in the identification of Cryptosporidium tyzzeri, Cryptosporidium muris, Cryptosporidium varanii and C. serpentis in several species of snakes. The sensitivity and specificity of real-time PCR were, respectively, 93.8% and 99.5%. Although three samples were positive for C. serpentis only by real-time PCR, and were considered as false positive results in the estimation of the epidemiological specificity and sensitivity, the melting curve analysis indicated that these samples had the same melting temperature of the C. serpentis samples. Thus, we conclude that real-time PCR targeting the gene Hsp70 is a sensitive and specific method for the detection of C. serpentis in fecal samples from snakes
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spelling Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo realCryptosporidiumDiagnóstico molecularEpidemiologiaReptilCobraReação em cadeia de polimeraseCryptosporidium serpentisCryptosporidium serpentis infection is common in reptiles, especially snakes, and is characterized by chronic infection with severe hypertrophic gastritis, which can be lethal. This research aimed to use the real- time polymerase chain reaction (PCR) targeting the heat shock protein gene (Hsp70) for detection of C. serpentis in fecal samples of 503 snakes, and to determine its analytical and epidemiological specificity and sensitivity using, as a gold standard, the nested PCR targeting the 18S rRNA (18S rRNA) gene followed by sequencing of the amplified fragments (nPCR/S). The real-time PCR was positive for C. serpentis in 17 samples (3.37%), and nPCR/S resulted in positive results for C. serpentis in 15 samples (2.98%). It was also observed that the nPCR/S was positive for Cryptosporidium spp. in 60 samples (11.98%). Sequencing of the fragments amplified by nPCR was possible in 38 samples, and resulted in the identification of Cryptosporidium tyzzeri, Cryptosporidium muris, Cryptosporidium varanii and C. serpentis in several species of snakes. The sensitivity and specificity of real-time PCR were, respectively, 93.8% and 99.5%. Although three samples were positive for C. serpentis only by real-time PCR, and were considered as false positive results in the estimation of the epidemiological specificity and sensitivity, the melting curve analysis indicated that these samples had the same melting temperature of the C. serpentis samples. Thus, we conclude that real-time PCR targeting the gene Hsp70 is a sensitive and specific method for the detection of C. serpentis in fecal samples from snakesFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)FAPESP: 07/54312-2Universidade Estadual Paulista (Unesp)Meireles, Marcelo VasconcelosUniversidade Estadual Paulista (Unesp)Silva, Deuvânia Carvalho da [UNESP]2014-08-13T14:50:38Z2014-08-13T14:50:38Z2013-11-27info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis78 f.application/pdfSILVA, Deuvânia Carvalho da. Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real. 2013. 78 f. Tese (doutorado) - Universidade Estadual Paulista Júlio de Mesquita Filho, Faculdade de Medicina Veterinária de Araçatuba, 2013.http://hdl.handle.net/11449/108461000744257000744257.pdf33004021075P8Alephreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPporinfo:eu-repo/semantics/openAccess2025-06-07T05:19:53Zoai:repositorio.unesp.br:11449/108461Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-06-07T05:19:53Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real
title Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real
spellingShingle Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real
Silva, Deuvânia Carvalho da [UNESP]
Cryptosporidium
Diagnóstico molecular
Epidemiologia
Reptil
Cobra
Reação em cadeia de polimerase
Cryptosporidium serpentis
title_short Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real
title_full Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real
title_fullStr Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real
title_full_unstemmed Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real
title_sort Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real
author Silva, Deuvânia Carvalho da [UNESP]
author_facet Silva, Deuvânia Carvalho da [UNESP]
author_role author
dc.contributor.none.fl_str_mv Meireles, Marcelo Vasconcelos
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Silva, Deuvânia Carvalho da [UNESP]
dc.subject.por.fl_str_mv Cryptosporidium
Diagnóstico molecular
Epidemiologia
Reptil
Cobra
Reação em cadeia de polimerase
Cryptosporidium serpentis
topic Cryptosporidium
Diagnóstico molecular
Epidemiologia
Reptil
Cobra
Reação em cadeia de polimerase
Cryptosporidium serpentis
description Cryptosporidium serpentis infection is common in reptiles, especially snakes, and is characterized by chronic infection with severe hypertrophic gastritis, which can be lethal. This research aimed to use the real- time polymerase chain reaction (PCR) targeting the heat shock protein gene (Hsp70) for detection of C. serpentis in fecal samples of 503 snakes, and to determine its analytical and epidemiological specificity and sensitivity using, as a gold standard, the nested PCR targeting the 18S rRNA (18S rRNA) gene followed by sequencing of the amplified fragments (nPCR/S). The real-time PCR was positive for C. serpentis in 17 samples (3.37%), and nPCR/S resulted in positive results for C. serpentis in 15 samples (2.98%). It was also observed that the nPCR/S was positive for Cryptosporidium spp. in 60 samples (11.98%). Sequencing of the fragments amplified by nPCR was possible in 38 samples, and resulted in the identification of Cryptosporidium tyzzeri, Cryptosporidium muris, Cryptosporidium varanii and C. serpentis in several species of snakes. The sensitivity and specificity of real-time PCR were, respectively, 93.8% and 99.5%. Although three samples were positive for C. serpentis only by real-time PCR, and were considered as false positive results in the estimation of the epidemiological specificity and sensitivity, the melting curve analysis indicated that these samples had the same melting temperature of the C. serpentis samples. Thus, we conclude that real-time PCR targeting the gene Hsp70 is a sensitive and specific method for the detection of C. serpentis in fecal samples from snakes
publishDate 2013
dc.date.none.fl_str_mv 2013-11-27
2014-08-13T14:50:38Z
2014-08-13T14:50:38Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv SILVA, Deuvânia Carvalho da. Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real. 2013. 78 f. Tese (doutorado) - Universidade Estadual Paulista Júlio de Mesquita Filho, Faculdade de Medicina Veterinária de Araçatuba, 2013.
http://hdl.handle.net/11449/108461
000744257
000744257.pdf
33004021075P8
identifier_str_mv SILVA, Deuvânia Carvalho da. Detecção de Cryptosporidium serpentis em amostras fecais de serpentes utilizando PCR em tempo real. 2013. 78 f. Tese (doutorado) - Universidade Estadual Paulista Júlio de Mesquita Filho, Faculdade de Medicina Veterinária de Araçatuba, 2013.
000744257
000744257.pdf
33004021075P8
url http://hdl.handle.net/11449/108461
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 78 f.
application/pdf
dc.publisher.none.fl_str_mv Universidade Estadual Paulista (Unesp)
publisher.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.source.none.fl_str_mv Aleph
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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