Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western Brazil

Detalhes bibliográficos
Ano de defesa: 2023
Autor(a) principal: Oliveira, Marcus Vinicius Brandão de
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: eng
Instituição de defesa: Biblioteca Digitais de Teses e Dissertações da USP
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: https://www.teses.usp.br/teses/disponiveis/38/38131/tde-24012024-145904/
Resumo: The tribe Akodontini comprise 16 genera and 91 species. Although widely distributed in South America, the tribe is absent in most of Chile and southern Patagonia, and few species occur in the Amazon. The phylogenetic relationships of this tribe, as well as the delimitation of new genera and species, have been revealed through systematic reviews and molecular studies. However, for several taxa, much of the geographic representation was not yet investigated. This is the case of Akodon and Thalpomys, phylogenetically close genera with distinct diversification patterns: 42 and two species, respectively. In Brazil, they occur mainly in the eastern and central regions, occupying areas of the Atlantic Forest and Cerrado. Records and the taxonomic status of members of these genera in western Brazil, in transition areas between the Amazon, Cerrado, and Pantanal, were rarely addressed in systematic studies. The present project aimed to: i) delimit and characterize the taxa within Akodon and Thalpomys, with special emphasis on specimens from western Brazil, ii) estimate the phylogenetic relationships among the species of each genus, and consequently illuminate part of the evolutionary history of the tribe Akodontini. The diversity of both genera was investigated under an integrative approach with karyological, morphological, morphometric, and molecular analyses. The study of these populations of Akodon allowed to recognize two new species, which we named as A. diauarum, endemic to Amazon/Cerrado transitional forests of Mato Grosso and Pará, and A. kadiweu, endemic to dry forests of Mato Grosso do Sul. Moreover, A. dayi was recorded in the dry forests of Mato Grosso, for the first time. These discoveries, along with the results of a densely sampled phylogenetic tree, allowed the recognition of three species-groups within western Brazil: boliviensis group (A. kadiweu), cursor group (A. diauarum, A. montensis), and dolores group (A. dayi, A. toba), all members of a large clade of Akodon that typically occur in lowlands (except for part of the boliviensis group) as recovered by the present phylogenetic hypothesis. The systematic review of Thalpomys allowed a better comprehension of this poorly known genus with: i)_a new hypothesis of a sister-relationship with Necromys, instead of Podoxymys, as proposed by previous studies, ii)_the recovery of a putative new species from Mato Grosso/Rondônia, iii)_redescription of T. cerradensis and T. lasiotis, including new diagnostic characters, with a significant change of their geographic range, iv)_geographic variation across qualitative and quantitative characters, v)_the hypothesis that the diversification of Thalpomys is intrinsically linked to the Cerrado. The integrative approaches of the systematics of Akodon and Thalpomys herein revealed that western Brazil harbors a previously underestimated diversity of Akodontini rodents. This is relevant not only as related to species richness of this area, but also by reveling a faunal component of species endemic to western Brazil. The present study provided further data to the comprehension of the diversification and biogeography of the tribe Akodontini, and calls for attention to the conservation of western Brazil and its Cerrado and transitional dry forest areas, still poorly studied and very diverse.
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spelling Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western BrazilTaxonomia e sistemática de espécies da tribo Akodontini (Rodentia: Cricetidae) do Oeste do BrasilAkodonAkodonAmérica do SulDelimitação de espéciesFilogeniaPhylogenySouth AmericaSpecies delimitationThalpomysThalpomysThe tribe Akodontini comprise 16 genera and 91 species. Although widely distributed in South America, the tribe is absent in most of Chile and southern Patagonia, and few species occur in the Amazon. The phylogenetic relationships of this tribe, as well as the delimitation of new genera and species, have been revealed through systematic reviews and molecular studies. However, for several taxa, much of the geographic representation was not yet investigated. This is the case of Akodon and Thalpomys, phylogenetically close genera with distinct diversification patterns: 42 and two species, respectively. In Brazil, they occur mainly in the eastern and central regions, occupying areas of the Atlantic Forest and Cerrado. Records and the taxonomic status of members of these genera in western Brazil, in transition areas between the Amazon, Cerrado, and Pantanal, were rarely addressed in systematic studies. The present project aimed to: i) delimit and characterize the taxa within Akodon and Thalpomys, with special emphasis on specimens from western Brazil, ii) estimate the phylogenetic relationships among the species of each genus, and consequently illuminate part of the evolutionary history of the tribe Akodontini. The diversity of both genera was investigated under an integrative approach with karyological, morphological, morphometric, and molecular analyses. The study of these populations of Akodon allowed to recognize two new species, which we named as A. diauarum, endemic to Amazon/Cerrado transitional forests of Mato Grosso and Pará, and A. kadiweu, endemic to dry forests of Mato Grosso do Sul. Moreover, A. dayi was recorded in the dry forests of Mato Grosso, for the first time. These discoveries, along with the results of a densely sampled phylogenetic tree, allowed the recognition of three species-groups within western Brazil: boliviensis group (A. kadiweu), cursor group (A. diauarum, A. montensis), and dolores group (A. dayi, A. toba), all members of a large clade of Akodon that typically occur in lowlands (except for part of the boliviensis group) as recovered by the present phylogenetic hypothesis. The systematic review of Thalpomys allowed a better comprehension of this poorly known genus with: i)_a new hypothesis of a sister-relationship with Necromys, instead of Podoxymys, as proposed by previous studies, ii)_the recovery of a putative new species from Mato Grosso/Rondônia, iii)_redescription of T. cerradensis and T. lasiotis, including new diagnostic characters, with a significant change of their geographic range, iv)_geographic variation across qualitative and quantitative characters, v)_the hypothesis that the diversification of Thalpomys is intrinsically linked to the Cerrado. The integrative approaches of the systematics of Akodon and Thalpomys herein revealed that western Brazil harbors a previously underestimated diversity of Akodontini rodents. This is relevant not only as related to species richness of this area, but also by reveling a faunal component of species endemic to western Brazil. The present study provided further data to the comprehension of the diversification and biogeography of the tribe Akodontini, and calls for attention to the conservation of western Brazil and its Cerrado and transitional dry forest areas, still poorly studied and very diverse.A tribo Akodontini abrange 16 gêneros e 91 espécies. Embora amplamente distribuída na América-do-Sul, está ausente na maior parte do Chile e sul da Patagônia, e poucas espécies ocorrem na Amazônia. As relações filogenéticas desta tribo, bem como a delimitação de novos gêneros e espécies, tem sido reveladas através de revisões sistemáticas e estudos moleculares. No entanto, para vários táxons, grande parte da representação geográfica ainda não foi investigada. É o caso de Akodon e Thalpomys, gêneros filogeneticamente próximos e com padrões de diversificação distintos: 42 e duas espécies, respectivamente. No Brasil ocorrem principalmente nas regiões leste e central, ocupando áreas de Mata Atlântica e Cerrado. Os registros e o status taxonômico dos membros desses gêneros no oeste do Brasil, em áreas de transição entre a Amazônia, Cerrado e Pantanal, raramente foram abordados em estudos sistemáticos. Este projeto teve como objetivos: i)_delimitar e caracterizar os táxons de Akodon e Thalpomys, com enfoque nos exemplares do oeste do Brasil, ii)_estimar as relações filogenéticas entre as espécies de cada gênero e, consequentemente, iluminar parte da história evolutiva da tribo Akodontini. A diversidade de ambos os gêneros foi investigada sob uma abordagem integrativa a partir de análises cariológicas, morfológicas, morfométricas e moleculares. O estudo dessas populações de Akodon permitiu reconhecer duas novas espécies, que descrevemos como A. diauarum, endêmico das florestas de transição Amazônia/Cerrado do Mato Grosso e Pará, e A. kadiweu, endêmico das florestas secas do Mato Grosso do Sul. Além disso, A. dayi foi registrada pela primeira vez em florestas secas do Mato Grosso. Essas descobertas, juntamente aos resultados da árvore filogenética com elevada representatividade de espécimes, permitiram reconhecer a presença de espécies de três grupos-de-espécies no oeste Brasileiro: grupo boliviensis (A. kadiweu), grupo cursor (A. diauarum, A. montensis) e grupo dolores (A. dayi, A. toba), todos membros de um grande clado de Akodon que ocorre em terras baixas (exceto parte do grupo boliviensis), conforme recuperado pela presente hipótese filogenética. A revisão sistemática de Thalpomys permitiu melhor compreensão deste gênero pouco conhecido através de: i)_uma nova hipótese de relação de parentesco, recuperado como gênero irmão de Necromys, e não de Podoxymys, como estudos anteriores, ii)_a descoberta de uma potencial nova espécie para o Mato Grosso/Rondônia, iii)_redescrição de T. cerradensis e T. lasiotis, com inclusão de novos caracteres morfológicos diagnósticos, e alteração significativa das áreas de distribuição geográfica, iv)_descrição da variação geográfica nos caracteres qualitativos e quantitativos, v)_a hipótese de que a diversificação de Thalpomys está intrinsecamente ligada ao Cerrado. As abordagens integrativas da sistemática de Akodon e Thalpomys revelaram que o oeste do Brasil abriga uma diversidade anteriormente subestimada de roedores da tribo Akodontini. Isto é relevante não apenas em relação à riqueza de espécies desta área, mas também por revelar um componente faunístico de espécies endêmicas do oeste do Brasil. Este estudo forneceu dados adicionais para a compreensão da diversificação/biogeografia da tribo Akodontini, e chama a atenção para a conservação do oeste brasileiro e de suas áreas de Cerrado e florestas secas de transição, ainda pouco estudadas e muito diversas.Biblioteca Digitais de Teses e Dissertações da USPCarmignotto, Ana PaulaPercequillo, Alexandre ReisOliveira, Marcus Vinicius Brandão de2023-11-27info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttps://www.teses.usp.br/teses/disponiveis/38/38131/tde-24012024-145904/reponame:Biblioteca Digital de Teses e Dissertações da USPinstname:Universidade de São Paulo (USP)instacron:USPReter o conteúdo por motivos de patente, publicação e/ou direitos autoriais.info:eu-repo/semantics/openAccesseng2024-10-09T13:16:04Zoai:teses.usp.br:tde-24012024-145904Biblioteca Digital de Teses e Dissertaçõeshttp://www.teses.usp.br/PUBhttp://www.teses.usp.br/cgi-bin/mtd2br.plvirginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.bropendoar:27212024-10-09T13:16:04Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western Brazil
Taxonomia e sistemática de espécies da tribo Akodontini (Rodentia: Cricetidae) do Oeste do Brasil
title Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western Brazil
spellingShingle Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western Brazil
Oliveira, Marcus Vinicius Brandão de
Akodon
Akodon
América do Sul
Delimitação de espécies
Filogenia
Phylogeny
South America
Species delimitation
Thalpomys
Thalpomys
title_short Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western Brazil
title_full Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western Brazil
title_fullStr Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western Brazil
title_full_unstemmed Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western Brazil
title_sort Taxonomy and systematics of species of the tribe Akodontini (Rodentia: Cricetidae) from Western Brazil
author Oliveira, Marcus Vinicius Brandão de
author_facet Oliveira, Marcus Vinicius Brandão de
author_role author
dc.contributor.none.fl_str_mv Carmignotto, Ana Paula
Percequillo, Alexandre Reis
dc.contributor.author.fl_str_mv Oliveira, Marcus Vinicius Brandão de
dc.subject.por.fl_str_mv Akodon
Akodon
América do Sul
Delimitação de espécies
Filogenia
Phylogeny
South America
Species delimitation
Thalpomys
Thalpomys
topic Akodon
Akodon
América do Sul
Delimitação de espécies
Filogenia
Phylogeny
South America
Species delimitation
Thalpomys
Thalpomys
description The tribe Akodontini comprise 16 genera and 91 species. Although widely distributed in South America, the tribe is absent in most of Chile and southern Patagonia, and few species occur in the Amazon. The phylogenetic relationships of this tribe, as well as the delimitation of new genera and species, have been revealed through systematic reviews and molecular studies. However, for several taxa, much of the geographic representation was not yet investigated. This is the case of Akodon and Thalpomys, phylogenetically close genera with distinct diversification patterns: 42 and two species, respectively. In Brazil, they occur mainly in the eastern and central regions, occupying areas of the Atlantic Forest and Cerrado. Records and the taxonomic status of members of these genera in western Brazil, in transition areas between the Amazon, Cerrado, and Pantanal, were rarely addressed in systematic studies. The present project aimed to: i) delimit and characterize the taxa within Akodon and Thalpomys, with special emphasis on specimens from western Brazil, ii) estimate the phylogenetic relationships among the species of each genus, and consequently illuminate part of the evolutionary history of the tribe Akodontini. The diversity of both genera was investigated under an integrative approach with karyological, morphological, morphometric, and molecular analyses. The study of these populations of Akodon allowed to recognize two new species, which we named as A. diauarum, endemic to Amazon/Cerrado transitional forests of Mato Grosso and Pará, and A. kadiweu, endemic to dry forests of Mato Grosso do Sul. Moreover, A. dayi was recorded in the dry forests of Mato Grosso, for the first time. These discoveries, along with the results of a densely sampled phylogenetic tree, allowed the recognition of three species-groups within western Brazil: boliviensis group (A. kadiweu), cursor group (A. diauarum, A. montensis), and dolores group (A. dayi, A. toba), all members of a large clade of Akodon that typically occur in lowlands (except for part of the boliviensis group) as recovered by the present phylogenetic hypothesis. The systematic review of Thalpomys allowed a better comprehension of this poorly known genus with: i)_a new hypothesis of a sister-relationship with Necromys, instead of Podoxymys, as proposed by previous studies, ii)_the recovery of a putative new species from Mato Grosso/Rondônia, iii)_redescription of T. cerradensis and T. lasiotis, including new diagnostic characters, with a significant change of their geographic range, iv)_geographic variation across qualitative and quantitative characters, v)_the hypothesis that the diversification of Thalpomys is intrinsically linked to the Cerrado. The integrative approaches of the systematics of Akodon and Thalpomys herein revealed that western Brazil harbors a previously underestimated diversity of Akodontini rodents. This is relevant not only as related to species richness of this area, but also by reveling a faunal component of species endemic to western Brazil. The present study provided further data to the comprehension of the diversification and biogeography of the tribe Akodontini, and calls for attention to the conservation of western Brazil and its Cerrado and transitional dry forest areas, still poorly studied and very diverse.
publishDate 2023
dc.date.none.fl_str_mv 2023-11-27
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