The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncer

Detalhes bibliográficos
Ano de defesa: 2025
Autor(a) principal: Sorkhabi, Parviz Azimnasab
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: eng
Instituição de defesa: Biblioteca Digitais de Teses e Dissertações da USP
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: https://www.teses.usp.br/teses/disponiveis/10/10132/tde-11082025-153928/
Resumo: In this dissertation, we aim to gain a deeper understanding the function of the of the indoleamine 2,3-dioxygenase (IDO) enzyme in the tumor microenvironment, particularly its impact on T cell function. We used a combination of in vitro and in vivo approaches, including different administration strategies, tumor models, and survival analyses, to evaluate the role of IDO in tumor progression. While our in vitro experiments revealed a significant influence of IDO on T cells, especially regulatory T cells (Tregs), these effects were not observed in our in vivo models, where IDO blockade alone failed to suppress tumor growth. This discrepancy led us to investigate why IDO inhibition alone may not be sufficient for tumor control. To address this, we applied bioinformatic analysis using publicly available datasets from human breast cancer samples to explore broader mechanisms. Notably, we observed a marked reduction in SATB1 expression in Treg cells following IDO blockade in vitro. Given SATB1’s role as a key chromatin organizer and regulator of Treg cell identity, we further explored potential interactions between IDO and SATB1 using in silico approaches. Overall, this study integrates both experimental and computational approaches to investigate the intricate interplay between metabolic and epigenetic mechanisms regulating T cell function in the tumor microenvironment. Our findings suggest that the immunosuppressive effects previously attributed solely to the IDO enzyme may also involve other tryptophan-catabolizing enzymes, such as IL4i1. These enzymes contribute to the depletion of tryptophan and the accumulation of immunoregulatory metabolites that suppress antitumor immunity, particularly through effects on T cells, including regulatory T cells (Tregs). Therefore, targeting IDO alone may be insufficient to achieve meaningful therapeutic outcomes. A combinatorial strategy that simultaneously inhibits multiple tryptophan-metabolizing enzymes may be necessary to more effectively disrupt the immunosuppressive metabolic environment and reduce tumor burden.
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spelling The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncerO papel da enzima IDO na expressão do ponto de controle imunitário CTLA- 4 nas células linfocitárias T no cancro da mamaCancerCâncerCélulas TCélulas T reguladoras(Treg)Cytotoxic T-lymphocyte-associated protein 4 (CTLA-4)Indoleamina 2,3-dioxigenase (IDO)Indoleamine 2,3-dioxygenase (IDO)Proteína de ligação à sequência rica em AT (SATB1)Regulatory T (Treg) cellsSpecial AT-rich Sequence-Binding Protein 1 (Satb1)T cellIn this dissertation, we aim to gain a deeper understanding the function of the of the indoleamine 2,3-dioxygenase (IDO) enzyme in the tumor microenvironment, particularly its impact on T cell function. We used a combination of in vitro and in vivo approaches, including different administration strategies, tumor models, and survival analyses, to evaluate the role of IDO in tumor progression. While our in vitro experiments revealed a significant influence of IDO on T cells, especially regulatory T cells (Tregs), these effects were not observed in our in vivo models, where IDO blockade alone failed to suppress tumor growth. This discrepancy led us to investigate why IDO inhibition alone may not be sufficient for tumor control. To address this, we applied bioinformatic analysis using publicly available datasets from human breast cancer samples to explore broader mechanisms. Notably, we observed a marked reduction in SATB1 expression in Treg cells following IDO blockade in vitro. Given SATB1’s role as a key chromatin organizer and regulator of Treg cell identity, we further explored potential interactions between IDO and SATB1 using in silico approaches. Overall, this study integrates both experimental and computational approaches to investigate the intricate interplay between metabolic and epigenetic mechanisms regulating T cell function in the tumor microenvironment. Our findings suggest that the immunosuppressive effects previously attributed solely to the IDO enzyme may also involve other tryptophan-catabolizing enzymes, such as IL4i1. These enzymes contribute to the depletion of tryptophan and the accumulation of immunoregulatory metabolites that suppress antitumor immunity, particularly through effects on T cells, including regulatory T cells (Tregs). Therefore, targeting IDO alone may be insufficient to achieve meaningful therapeutic outcomes. A combinatorial strategy that simultaneously inhibits multiple tryptophan-metabolizing enzymes may be necessary to more effectively disrupt the immunosuppressive metabolic environment and reduce tumor burden.Nesta dissertação, buscamos compreender mais profundamente a enzima indoleamina 2,3- dioxigenase (IDO) no microambiente tumoral, com foco especial em seu impacto na função das células T. Utilizamos uma combinação de abordagens in vitro e in vivo, incluindo diferentes estratégias de administração, modelos tumorais e análises de sobrevivência, para avaliar o papel da IDO na progressão do tumor. Embora nossos experimentos in vitro tenham revelado uma influência significativa da IDO nas células T, especialmente nas células T reguladoras (Tregs), esses efeitos não foram observados nos modelos in vivo, nos quais o bloqueio da IDO isoladamente não foi capaz de suprimir o crescimento tumoral. Essa discrepância nos levou a investigar por que a inibição da IDO sozinha pode não ser suficiente para o controle tumoral. Para isso, aplicamos análises bioinformáticas utilizando conjuntos de dados públicos de amostras de câncer de mama humano para explorar mecanismos mais amplos. Observamos, de forma notável, uma redução marcante na expressão de SATB1 nas células Treg após o bloqueio da IDO in vitro. Dado o papel da SATB1 como um importante organizador da cromatina e regulador da identidade das células Treg, exploramos ainda mais possíveis interações entre IDO e SATB1 por meio de abordagens in silico. De modo geral, este estudo integra métodos experimentais e computacionais para investigar a complexa interação entre mecanismos metabólicos e epigenéticos que regulam a função das células T no microambiente tumoral. Nossos resultados sugerem que os efeitos imunossupressores anteriormente atribuídos exclusivamente à enzima IDO também possam envolver outras enzimas que catabolizam o triptofano, como a IL4i1. Essas enzimas contribuem para a depleção de triptofano e o acúmulo de metabólitos imunorregulatórios que suprimem a imunidade antitumoral, particularmente por meio de efeitos sobre células T, incluindo as Tregs. Portanto, o bloqueio da IDO de forma isolada pode ser insuficiente para alcançar resultados terapêuticos significativos. Uma estratégia combinatória que iniba simultaneamente múltiplas enzimas metabolizadoras de triptofano pode ser necessária para interromper de forma mais eficaz o ambiente metabólico imunossupressor e reduzir a carga tumoral.Biblioteca Digitais de Teses e Dissertações da USPGomes, Cristina de Oliveira Massoco SallesKfoury Junior, José RobertoSorkhabi, Parviz Azimnasab2025-07-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttps://www.teses.usp.br/teses/disponiveis/10/10132/tde-11082025-153928/reponame:Biblioteca Digital de Teses e Dissertações da USPinstname:Universidade de São Paulo (USP)instacron:USPReter o conteúdo por motivos de patente, publicação e/ou direitos autoriais.info:eu-repo/semantics/openAccesseng2025-10-15T19:10:02Zoai:teses.usp.br:tde-11082025-153928Biblioteca Digital de Teses e Dissertaçõeshttp://www.teses.usp.br/PUBhttp://www.teses.usp.br/cgi-bin/mtd2br.plvirginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.bropendoar:27212025-10-15T19:10:02Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncer
O papel da enzima IDO na expressão do ponto de controle imunitário CTLA- 4 nas células linfocitárias T no cancro da mama
title The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncer
spellingShingle The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncer
Sorkhabi, Parviz Azimnasab
Cancer
Câncer
Células T
Células T reguladoras(Treg)
Cytotoxic T-lymphocyte-associated protein 4 (CTLA-4)
Indoleamina 2,3-dioxigenase (IDO)
Indoleamine 2,3-dioxygenase (IDO)
Proteína de ligação à sequência rica em AT (SATB1)
Regulatory T (Treg) cells
Special AT-rich Sequence-Binding Protein 1 (Satb1)
T cell
title_short The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncer
title_full The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncer
title_fullStr The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncer
title_full_unstemmed The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncer
title_sort The role of IDO enzyme on the expression of CTLA-4 immune checkpoint on the T lymphocyte cells in mammary câncer
author Sorkhabi, Parviz Azimnasab
author_facet Sorkhabi, Parviz Azimnasab
author_role author
dc.contributor.none.fl_str_mv Gomes, Cristina de Oliveira Massoco Salles
Kfoury Junior, José Roberto
dc.contributor.author.fl_str_mv Sorkhabi, Parviz Azimnasab
dc.subject.por.fl_str_mv Cancer
Câncer
Células T
Células T reguladoras(Treg)
Cytotoxic T-lymphocyte-associated protein 4 (CTLA-4)
Indoleamina 2,3-dioxigenase (IDO)
Indoleamine 2,3-dioxygenase (IDO)
Proteína de ligação à sequência rica em AT (SATB1)
Regulatory T (Treg) cells
Special AT-rich Sequence-Binding Protein 1 (Satb1)
T cell
topic Cancer
Câncer
Células T
Células T reguladoras(Treg)
Cytotoxic T-lymphocyte-associated protein 4 (CTLA-4)
Indoleamina 2,3-dioxigenase (IDO)
Indoleamine 2,3-dioxygenase (IDO)
Proteína de ligação à sequência rica em AT (SATB1)
Regulatory T (Treg) cells
Special AT-rich Sequence-Binding Protein 1 (Satb1)
T cell
description In this dissertation, we aim to gain a deeper understanding the function of the of the indoleamine 2,3-dioxygenase (IDO) enzyme in the tumor microenvironment, particularly its impact on T cell function. We used a combination of in vitro and in vivo approaches, including different administration strategies, tumor models, and survival analyses, to evaluate the role of IDO in tumor progression. While our in vitro experiments revealed a significant influence of IDO on T cells, especially regulatory T cells (Tregs), these effects were not observed in our in vivo models, where IDO blockade alone failed to suppress tumor growth. This discrepancy led us to investigate why IDO inhibition alone may not be sufficient for tumor control. To address this, we applied bioinformatic analysis using publicly available datasets from human breast cancer samples to explore broader mechanisms. Notably, we observed a marked reduction in SATB1 expression in Treg cells following IDO blockade in vitro. Given SATB1’s role as a key chromatin organizer and regulator of Treg cell identity, we further explored potential interactions between IDO and SATB1 using in silico approaches. Overall, this study integrates both experimental and computational approaches to investigate the intricate interplay between metabolic and epigenetic mechanisms regulating T cell function in the tumor microenvironment. Our findings suggest that the immunosuppressive effects previously attributed solely to the IDO enzyme may also involve other tryptophan-catabolizing enzymes, such as IL4i1. These enzymes contribute to the depletion of tryptophan and the accumulation of immunoregulatory metabolites that suppress antitumor immunity, particularly through effects on T cells, including regulatory T cells (Tregs). Therefore, targeting IDO alone may be insufficient to achieve meaningful therapeutic outcomes. A combinatorial strategy that simultaneously inhibits multiple tryptophan-metabolizing enzymes may be necessary to more effectively disrupt the immunosuppressive metabolic environment and reduce tumor burden.
publishDate 2025
dc.date.none.fl_str_mv 2025-07-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.teses.usp.br/teses/disponiveis/10/10132/tde-11082025-153928/
url https://www.teses.usp.br/teses/disponiveis/10/10132/tde-11082025-153928/
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv
dc.rights.driver.fl_str_mv Reter o conteúdo por motivos de patente, publicação e/ou direitos autoriais.
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Reter o conteúdo por motivos de patente, publicação e/ou direitos autoriais.
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.coverage.none.fl_str_mv
dc.publisher.none.fl_str_mv Biblioteca Digitais de Teses e Dissertações da USP
publisher.none.fl_str_mv Biblioteca Digitais de Teses e Dissertações da USP
dc.source.none.fl_str_mv
reponame:Biblioteca Digital de Teses e Dissertações da USP
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Biblioteca Digital de Teses e Dissertações da USP
collection Biblioteca Digital de Teses e Dissertações da USP
repository.name.fl_str_mv Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)
repository.mail.fl_str_mv virginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.br
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