Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
| Ano de defesa: | 2025 |
|---|---|
| Autor(a) principal: | |
| Orientador(a): | |
| Banca de defesa: | |
| Tipo de documento: | Dissertação |
| Tipo de acesso: | Acesso aberto |
| Idioma: | eng |
| Instituição de defesa: |
Biblioteca Digitais de Teses e Dissertações da USP
|
| Programa de Pós-Graduação: |
Não Informado pela instituição
|
| Departamento: |
Não Informado pela instituição
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| País: |
Não Informado pela instituição
|
| Palavras-chave em Português: | |
| Link de acesso: | https://www.teses.usp.br/teses/disponiveis/9/9143/tde-06022026-145313/ |
Resumo: | Leishmaniasis is a neglected tropical disease that causes significant morbidity and mortality worldwide. Current treatments are limited by toxicity, high cost, and low efficacy, reinforcing the need for safer and more selective therapeutic alternatives. Sirtuin 2 (SIR2RP1), an NAD+-dependent deacetylase, plays essential roles in the physiology and survival of protozoa of the genus Leishmania, making it a promising target for drug development. This study focuses on identifying and evaluating potential inhibitors of Leishmania SIR2RP1 using in silico methods. Known sirtuin inhibitors are systematically analyzed based on their selectivity indices (SI), therapeutic indices (TI), and drug-likeness profiles to prioritize the most promising candidates. Through this comparative analysis, N-(2-Fluorophenyl)nicotinamide (NmoF) emerges as the reference compound due to its outstanding selectivity for Leishmania sirtuins and favorable molecular properties. Based on this prioritization, a ligand-based virtual screening (LBVS) of 460,160 compounds from the Enamine Hit Locator Library (HLL-460) is carried out using ROCS/VROCS to identify novel compounds that are structurally and electrostatically similar to NmoF. This targeted screening identifies 7 new molecules with high selectivity and potential inhibitory activity against Leishmania SIR2RP1. Hits are evaluated for their ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties to assess pharmacokinetic and safety profiles. Overall, this study aims to propose new candidate compounds for development as selective anti-Leishmania agents, contributing to the search for safer and more effective treatments against leishmaniasis. |
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Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening ApproachExploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening ApproachDoenças Tropicais negligenciadasLeishmaniaSIR2RP1Sirtuína 2Triagem virtualLeishmaniasis is a neglected tropical disease that causes significant morbidity and mortality worldwide. Current treatments are limited by toxicity, high cost, and low efficacy, reinforcing the need for safer and more selective therapeutic alternatives. Sirtuin 2 (SIR2RP1), an NAD+-dependent deacetylase, plays essential roles in the physiology and survival of protozoa of the genus Leishmania, making it a promising target for drug development. This study focuses on identifying and evaluating potential inhibitors of Leishmania SIR2RP1 using in silico methods. Known sirtuin inhibitors are systematically analyzed based on their selectivity indices (SI), therapeutic indices (TI), and drug-likeness profiles to prioritize the most promising candidates. Through this comparative analysis, N-(2-Fluorophenyl)nicotinamide (NmoF) emerges as the reference compound due to its outstanding selectivity for Leishmania sirtuins and favorable molecular properties. Based on this prioritization, a ligand-based virtual screening (LBVS) of 460,160 compounds from the Enamine Hit Locator Library (HLL-460) is carried out using ROCS/VROCS to identify novel compounds that are structurally and electrostatically similar to NmoF. This targeted screening identifies 7 new molecules with high selectivity and potential inhibitory activity against Leishmania SIR2RP1. Hits are evaluated for their ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties to assess pharmacokinetic and safety profiles. Overall, this study aims to propose new candidate compounds for development as selective anti-Leishmania agents, contributing to the search for safer and more effective treatments against leishmaniasis.A leishmaniose é uma doença tropical negligenciada que causa considerável morbidade e mortalidade em escala global. Os tratamentos atualmente disponíveis apresentam limitações como toxicidade, alto custo e baixa eficácia, o que reforça a necessidade de alternativas terapêuticas mais seguras e seletivas. A sirtuína 2 (SIR2RP1), uma desacetilase dependente de NAD+, desempenha funções essenciais na fisiologia e sobrevivência de protozoários do gênero Leishmania, sendo um alvo promissor para o desenvolvimento de novos fármacos. Este estudo tem como foco a identificação e avaliação de potenciais inibidores da SIR2RP1 de Leishmania por meio de métodos in silico. Inibidores conhecidos de sirtuínas foram sistematicamente analisados com base em seus índices de seletividade (SI), índices terapêuticos (TI) e perfis de propriedades farmacológicas, visando a priorização dos candidatos mais promissores. A partir dessa análise comparativa, o composto N-(2-Fluorofenil)nicotinamida (NmoF) destacou-se como referência devido à sua seletividade marcante para sirtuínas de Leishmania e propriedades moleculares favoráveis. Com base nessa priorização, foi realizada uma triagem virtual baseada em ligantes (LBVS) de 460.160 compostos da biblioteca Enamine Hit Locator Library (HLL460) utilizando as ferramentas ROCS/VROCS, com o objetivo de identificar novos compostos estrutural e eletrostaticamente semelhantes ao NmoF. Essa triagem direcionada resultou na identificação de 7 novas moléculas com alta seletividade e potencial atividade inibitória contra a SIR2RP1 de Leishmania. Os compostos identificados foram ainda avaliados quanto às suas propriedades ADMET (absorção, distribuição, metabolismo, excreção e toxicidade), com o objetivo de prever perfis farmacocinéticos e de segurança. De modo geral, este estudo propõe novos compostos candidatos ao desenvolvimento como agentes seletivos contra Leishmania, contribuindo para a busca por tratamentos mais seguros e eficazes contra a leishmaniose.Biblioteca Digitais de Teses e Dissertações da USPTrossini, Gustavo Henrique GoulartJesus, Jullyane Gabryelly de2025-11-14info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttps://www.teses.usp.br/teses/disponiveis/9/9143/tde-06022026-145313/reponame:Biblioteca Digital de Teses e Dissertações da USPinstname:Universidade de São Paulo (USP)instacron:USPLiberar o conteúdo para acesso público.info:eu-repo/semantics/openAccesseng2026-02-11T15:19:01Zoai:teses.usp.br:tde-06022026-145313Biblioteca Digital de Teses e Dissertaçõeshttp://www.teses.usp.br/PUBhttp://www.teses.usp.br/cgi-bin/mtd2br.plvirginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.bropendoar:27212026-02-11T15:19:01Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)false |
| dc.title.none.fl_str_mv |
Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach |
| title |
Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach |
| spellingShingle |
Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach Jesus, Jullyane Gabryelly de Doenças Tropicais negligenciadas Leishmania SIR2RP1 Sirtuína 2 Triagem virtual |
| title_short |
Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach |
| title_full |
Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach |
| title_fullStr |
Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach |
| title_full_unstemmed |
Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach |
| title_sort |
Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach |
| author |
Jesus, Jullyane Gabryelly de |
| author_facet |
Jesus, Jullyane Gabryelly de |
| author_role |
author |
| dc.contributor.none.fl_str_mv |
Trossini, Gustavo Henrique Goulart |
| dc.contributor.author.fl_str_mv |
Jesus, Jullyane Gabryelly de |
| dc.subject.por.fl_str_mv |
Doenças Tropicais negligenciadas Leishmania SIR2RP1 Sirtuína 2 Triagem virtual |
| topic |
Doenças Tropicais negligenciadas Leishmania SIR2RP1 Sirtuína 2 Triagem virtual |
| description |
Leishmaniasis is a neglected tropical disease that causes significant morbidity and mortality worldwide. Current treatments are limited by toxicity, high cost, and low efficacy, reinforcing the need for safer and more selective therapeutic alternatives. Sirtuin 2 (SIR2RP1), an NAD+-dependent deacetylase, plays essential roles in the physiology and survival of protozoa of the genus Leishmania, making it a promising target for drug development. This study focuses on identifying and evaluating potential inhibitors of Leishmania SIR2RP1 using in silico methods. Known sirtuin inhibitors are systematically analyzed based on their selectivity indices (SI), therapeutic indices (TI), and drug-likeness profiles to prioritize the most promising candidates. Through this comparative analysis, N-(2-Fluorophenyl)nicotinamide (NmoF) emerges as the reference compound due to its outstanding selectivity for Leishmania sirtuins and favorable molecular properties. Based on this prioritization, a ligand-based virtual screening (LBVS) of 460,160 compounds from the Enamine Hit Locator Library (HLL-460) is carried out using ROCS/VROCS to identify novel compounds that are structurally and electrostatically similar to NmoF. This targeted screening identifies 7 new molecules with high selectivity and potential inhibitory activity against Leishmania SIR2RP1. Hits are evaluated for their ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties to assess pharmacokinetic and safety profiles. Overall, this study aims to propose new candidate compounds for development as selective anti-Leishmania agents, contributing to the search for safer and more effective treatments against leishmaniasis. |
| publishDate |
2025 |
| dc.date.none.fl_str_mv |
2025-11-14 |
| dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
| format |
masterThesis |
| status_str |
publishedVersion |
| dc.identifier.uri.fl_str_mv |
https://www.teses.usp.br/teses/disponiveis/9/9143/tde-06022026-145313/ |
| url |
https://www.teses.usp.br/teses/disponiveis/9/9143/tde-06022026-145313/ |
| dc.language.iso.fl_str_mv |
eng |
| language |
eng |
| dc.relation.none.fl_str_mv |
|
| dc.rights.driver.fl_str_mv |
Liberar o conteúdo para acesso público. info:eu-repo/semantics/openAccess |
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Liberar o conteúdo para acesso público. |
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openAccess |
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application/pdf |
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|
| dc.publisher.none.fl_str_mv |
Biblioteca Digitais de Teses e Dissertações da USP |
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Biblioteca Digitais de Teses e Dissertações da USP |
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reponame:Biblioteca Digital de Teses e Dissertações da USP instname:Universidade de São Paulo (USP) instacron:USP |
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Universidade de São Paulo (USP) |
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USP |
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USP |
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Biblioteca Digital de Teses e Dissertações da USP |
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Biblioteca Digital de Teses e Dissertações da USP |
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Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP) |
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virginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.br |
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1865492413133357056 |