Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach

Detalhes bibliográficos
Ano de defesa: 2025
Autor(a) principal: Jesus, Jullyane Gabryelly de
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: eng
Instituição de defesa: Biblioteca Digitais de Teses e Dissertações da USP
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: https://www.teses.usp.br/teses/disponiveis/9/9143/tde-06022026-145313/
Resumo: Leishmaniasis is a neglected tropical disease that causes significant morbidity and mortality worldwide. Current treatments are limited by toxicity, high cost, and low efficacy, reinforcing the need for safer and more selective therapeutic alternatives. Sirtuin 2 (SIR2RP1), an NAD+-dependent deacetylase, plays essential roles in the physiology and survival of protozoa of the genus Leishmania, making it a promising target for drug development. This study focuses on identifying and evaluating potential inhibitors of Leishmania SIR2RP1 using in silico methods. Known sirtuin inhibitors are systematically analyzed based on their selectivity indices (SI), therapeutic indices (TI), and drug-likeness profiles to prioritize the most promising candidates. Through this comparative analysis, N-(2-Fluorophenyl)nicotinamide (NmoF) emerges as the reference compound due to its outstanding selectivity for Leishmania sirtuins and favorable molecular properties. Based on this prioritization, a ligand-based virtual screening (LBVS) of 460,160 compounds from the Enamine Hit Locator Library (HLL-460) is carried out using ROCS/VROCS to identify novel compounds that are structurally and electrostatically similar to NmoF. This targeted screening identifies 7 new molecules with high selectivity and potential inhibitory activity against Leishmania SIR2RP1. Hits are evaluated for their ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties to assess pharmacokinetic and safety profiles. Overall, this study aims to propose new candidate compounds for development as selective anti-Leishmania agents, contributing to the search for safer and more effective treatments against leishmaniasis.
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spelling Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening ApproachExploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening ApproachDoenças Tropicais negligenciadasLeishmaniaSIR2RP1Sirtuína 2Triagem virtualLeishmaniasis is a neglected tropical disease that causes significant morbidity and mortality worldwide. Current treatments are limited by toxicity, high cost, and low efficacy, reinforcing the need for safer and more selective therapeutic alternatives. Sirtuin 2 (SIR2RP1), an NAD+-dependent deacetylase, plays essential roles in the physiology and survival of protozoa of the genus Leishmania, making it a promising target for drug development. This study focuses on identifying and evaluating potential inhibitors of Leishmania SIR2RP1 using in silico methods. Known sirtuin inhibitors are systematically analyzed based on their selectivity indices (SI), therapeutic indices (TI), and drug-likeness profiles to prioritize the most promising candidates. Through this comparative analysis, N-(2-Fluorophenyl)nicotinamide (NmoF) emerges as the reference compound due to its outstanding selectivity for Leishmania sirtuins and favorable molecular properties. Based on this prioritization, a ligand-based virtual screening (LBVS) of 460,160 compounds from the Enamine Hit Locator Library (HLL-460) is carried out using ROCS/VROCS to identify novel compounds that are structurally and electrostatically similar to NmoF. This targeted screening identifies 7 new molecules with high selectivity and potential inhibitory activity against Leishmania SIR2RP1. Hits are evaluated for their ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties to assess pharmacokinetic and safety profiles. Overall, this study aims to propose new candidate compounds for development as selective anti-Leishmania agents, contributing to the search for safer and more effective treatments against leishmaniasis.A leishmaniose é uma doença tropical negligenciada que causa considerável morbidade e mortalidade em escala global. Os tratamentos atualmente disponíveis apresentam limitações como toxicidade, alto custo e baixa eficácia, o que reforça a necessidade de alternativas terapêuticas mais seguras e seletivas. A sirtuína 2 (SIR2RP1), uma desacetilase dependente de NAD+, desempenha funções essenciais na fisiologia e sobrevivência de protozoários do gênero Leishmania, sendo um alvo promissor para o desenvolvimento de novos fármacos. Este estudo tem como foco a identificação e avaliação de potenciais inibidores da SIR2RP1 de Leishmania por meio de métodos in silico. Inibidores conhecidos de sirtuínas foram sistematicamente analisados com base em seus índices de seletividade (SI), índices terapêuticos (TI) e perfis de propriedades farmacológicas, visando a priorização dos candidatos mais promissores. A partir dessa análise comparativa, o composto N-(2-Fluorofenil)nicotinamida (NmoF) destacou-se como referência devido à sua seletividade marcante para sirtuínas de Leishmania e propriedades moleculares favoráveis. Com base nessa priorização, foi realizada uma triagem virtual baseada em ligantes (LBVS) de 460.160 compostos da biblioteca Enamine Hit Locator Library (HLL460) utilizando as ferramentas ROCS/VROCS, com o objetivo de identificar novos compostos estrutural e eletrostaticamente semelhantes ao NmoF. Essa triagem direcionada resultou na identificação de 7 novas moléculas com alta seletividade e potencial atividade inibitória contra a SIR2RP1 de Leishmania. Os compostos identificados foram ainda avaliados quanto às suas propriedades ADMET (absorção, distribuição, metabolismo, excreção e toxicidade), com o objetivo de prever perfis farmacocinéticos e de segurança. De modo geral, este estudo propõe novos compostos candidatos ao desenvolvimento como agentes seletivos contra Leishmania, contribuindo para a busca por tratamentos mais seguros e eficazes contra a leishmaniose.Biblioteca Digitais de Teses e Dissertações da USPTrossini, Gustavo Henrique GoulartJesus, Jullyane Gabryelly de2025-11-14info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttps://www.teses.usp.br/teses/disponiveis/9/9143/tde-06022026-145313/reponame:Biblioteca Digital de Teses e Dissertações da USPinstname:Universidade de São Paulo (USP)instacron:USPLiberar o conteúdo para acesso público.info:eu-repo/semantics/openAccesseng2026-02-11T15:19:01Zoai:teses.usp.br:tde-06022026-145313Biblioteca Digital de Teses e Dissertaçõeshttp://www.teses.usp.br/PUBhttp://www.teses.usp.br/cgi-bin/mtd2br.plvirginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.bropendoar:27212026-02-11T15:19:01Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
title Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
spellingShingle Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
Jesus, Jullyane Gabryelly de
Doenças Tropicais negligenciadas
Leishmania
SIR2RP1
Sirtuína 2
Triagem virtual
title_short Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
title_full Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
title_fullStr Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
title_full_unstemmed Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
title_sort Exploring Sirtuin 2 Inhibitors as Anti-Leishmanial Therapy Candidates: A Virtual Screening Approach
author Jesus, Jullyane Gabryelly de
author_facet Jesus, Jullyane Gabryelly de
author_role author
dc.contributor.none.fl_str_mv Trossini, Gustavo Henrique Goulart
dc.contributor.author.fl_str_mv Jesus, Jullyane Gabryelly de
dc.subject.por.fl_str_mv Doenças Tropicais negligenciadas
Leishmania
SIR2RP1
Sirtuína 2
Triagem virtual
topic Doenças Tropicais negligenciadas
Leishmania
SIR2RP1
Sirtuína 2
Triagem virtual
description Leishmaniasis is a neglected tropical disease that causes significant morbidity and mortality worldwide. Current treatments are limited by toxicity, high cost, and low efficacy, reinforcing the need for safer and more selective therapeutic alternatives. Sirtuin 2 (SIR2RP1), an NAD+-dependent deacetylase, plays essential roles in the physiology and survival of protozoa of the genus Leishmania, making it a promising target for drug development. This study focuses on identifying and evaluating potential inhibitors of Leishmania SIR2RP1 using in silico methods. Known sirtuin inhibitors are systematically analyzed based on their selectivity indices (SI), therapeutic indices (TI), and drug-likeness profiles to prioritize the most promising candidates. Through this comparative analysis, N-(2-Fluorophenyl)nicotinamide (NmoF) emerges as the reference compound due to its outstanding selectivity for Leishmania sirtuins and favorable molecular properties. Based on this prioritization, a ligand-based virtual screening (LBVS) of 460,160 compounds from the Enamine Hit Locator Library (HLL-460) is carried out using ROCS/VROCS to identify novel compounds that are structurally and electrostatically similar to NmoF. This targeted screening identifies 7 new molecules with high selectivity and potential inhibitory activity against Leishmania SIR2RP1. Hits are evaluated for their ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties to assess pharmacokinetic and safety profiles. Overall, this study aims to propose new candidate compounds for development as selective anti-Leishmania agents, contributing to the search for safer and more effective treatments against leishmaniasis.
publishDate 2025
dc.date.none.fl_str_mv 2025-11-14
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.teses.usp.br/teses/disponiveis/9/9143/tde-06022026-145313/
url https://www.teses.usp.br/teses/disponiveis/9/9143/tde-06022026-145313/
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv
dc.rights.driver.fl_str_mv Liberar o conteúdo para acesso público.
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Liberar o conteúdo para acesso público.
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
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dc.publisher.none.fl_str_mv Biblioteca Digitais de Teses e Dissertações da USP
publisher.none.fl_str_mv Biblioteca Digitais de Teses e Dissertações da USP
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reponame:Biblioteca Digital de Teses e Dissertações da USP
instname:Universidade de São Paulo (USP)
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instname_str Universidade de São Paulo (USP)
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institution USP
reponame_str Biblioteca Digital de Teses e Dissertações da USP
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