Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic models
| Ano de defesa: | 2026 |
|---|---|
| Autor(a) principal: | |
| Orientador(a): | |
| Banca de defesa: | |
| Tipo de documento: | Dissertação |
| Tipo de acesso: | Acesso aberto |
| Idioma: | eng |
| Instituição de defesa: |
Biblioteca Digitais de Teses e Dissertações da USP
|
| Programa de Pós-Graduação: |
Não Informado pela instituição
|
| Departamento: |
Não Informado pela instituição
|
| País: |
Não Informado pela instituição
|
| Palavras-chave em Português: | |
| Link de acesso: | https://www.teses.usp.br/teses/disponiveis/18/18152/tde-10032026-141324/ |
Resumo: | Magnetic resonance imaging is a technique capable of producing high-quality images of the human body, being the gold standard in medical imaging for many parts of the body, specially for soft tissues like the brain. Also, it does not expose the patient to ionizing radiation like in X-rays and CT-scans. MRI scans, however, are more expensive and have longer acquisition times when compared to the other methods. Leveraging the MRI technology, it is also possible to obtain images that provide information like the diffusion of water molecules in the brain (diffusion MRI), which can be very useful for detecting earlier strokes and making diagnostics of diseases such as migraine. Diffusion MRI, however, needs to acquire images in many diffusion gradient directions, which take a long time to acquire, on the order of several minutes to more than an hour. To reduce this acquisition time, it is possible to reduce the resolution of the image acquired or reduce the number of diffusion gradient directions. On recent years, deep learning techniques have shown great results on improving the quality of diffusion magnetic resonance imaging with less resolution or less diffusion gradient directions. Based on that, this work proposes a novel method of improving the quality of diffusion MRI with less diffusion gradient directions acquired, by performing angular super-resolution through the use of a super-resolution neural network. The super-resolution neural network used in this work is of the class diffusion models, a class of generative neural-networks that in recent years have been showing outstanding results in the super-resolution task in many applications, and also in many other tasks like denoising and segmentation in medical imaging and even more specifically in MRI. The proposed method was able to improve diffusion metrics obtained with few diffusion gradient directions (8 directions- 6 DWIs + 2 b0s). As diffusion tensor imaging (DTI) was used, fractional anisotropy is the metric most sensitive to number of directions, and in this metric it improved both visually and on the evaluation metrics proposed (SSIM increased from 0.7182 to 0.8028, PSNR from 16.19 to 19.52, the difference in the median values decreased from 46.42% to 14.54%, and ratio of voxels with statistical difference in TBSS reduced from 58.17% to 53.77%). However, the approach also incurs high computational cost and, due to potential generative-AI hallucinations, is best suited for applications that rely on summary statistics rather than direct image interpretation. |
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Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic modelsSuper-resolução angular em ressonância magnética ponderada por difusão utilizando modelos probabilísticos de difusãoangular super-resolutiondiffusion modelsdiffusion MRIdiminuição do tempo de aquisiçãomagnetic resonance imagingmodelos probabilísticos de difusãoredes neurais de super-resoluçãoreduce acquisition timeressonância magnéticaRM de difusãosuper-resolução angularsuper-resolution neural networksMagnetic resonance imaging is a technique capable of producing high-quality images of the human body, being the gold standard in medical imaging for many parts of the body, specially for soft tissues like the brain. Also, it does not expose the patient to ionizing radiation like in X-rays and CT-scans. MRI scans, however, are more expensive and have longer acquisition times when compared to the other methods. Leveraging the MRI technology, it is also possible to obtain images that provide information like the diffusion of water molecules in the brain (diffusion MRI), which can be very useful for detecting earlier strokes and making diagnostics of diseases such as migraine. Diffusion MRI, however, needs to acquire images in many diffusion gradient directions, which take a long time to acquire, on the order of several minutes to more than an hour. To reduce this acquisition time, it is possible to reduce the resolution of the image acquired or reduce the number of diffusion gradient directions. On recent years, deep learning techniques have shown great results on improving the quality of diffusion magnetic resonance imaging with less resolution or less diffusion gradient directions. Based on that, this work proposes a novel method of improving the quality of diffusion MRI with less diffusion gradient directions acquired, by performing angular super-resolution through the use of a super-resolution neural network. The super-resolution neural network used in this work is of the class diffusion models, a class of generative neural-networks that in recent years have been showing outstanding results in the super-resolution task in many applications, and also in many other tasks like denoising and segmentation in medical imaging and even more specifically in MRI. The proposed method was able to improve diffusion metrics obtained with few diffusion gradient directions (8 directions- 6 DWIs + 2 b0s). As diffusion tensor imaging (DTI) was used, fractional anisotropy is the metric most sensitive to number of directions, and in this metric it improved both visually and on the evaluation metrics proposed (SSIM increased from 0.7182 to 0.8028, PSNR from 16.19 to 19.52, the difference in the median values decreased from 46.42% to 14.54%, and ratio of voxels with statistical difference in TBSS reduced from 58.17% to 53.77%). However, the approach also incurs high computational cost and, due to potential generative-AI hallucinations, is best suited for applications that rely on summary statistics rather than direct image interpretation.A ressonância magnética (RM) é uma técnica capaz de produzir imagens de alta qualidade do corpo humano, sendo considerada o padrão ouro em imagem médica para muitas partes do corpo, especialmente para tecidos moles como o cérebro. Além disso, ela não expõe o paciente à radiação ionizante, como ocorre em raios-X e tomografias computadorizadas. No entanto, os exames de RM são mais caros e têm tempos de aquisição mais longos. Fazendo uso da tecnologia de RM também é possível obter imagens que fornecem informações como a difusão de moléculas de água no cérebro (RM de difusão), o que pode ser muito útil na detecção rápida de derrame e até no diagnóstico de doenças. No entanto, a RM de difusão requer a aquisição de imagens em muitas direções de gradiente de difusão, o que leva muito tempo, na ordem de vários minutos a mais de uma hora. Para diminuir esse tempo de aquisição, é possível reduzir a resolução da imagem adquirida ou o número de direções de gradiente de difusão. Nos últimos anos, técnicas de aprendizado profundo têm mostrado bons resultados na melhoria da qualidade da RM de difusão com menor resolução ou menos direções de gradiente de difusão. Com base nisso, este trabalho propõe um método para melhorar a qualidade da RM de difusão com menos direções de gradiente de difusão adquiridas, através do uso de uma rede neural de super-resolução. A rede neural de super-resolução utilizada neste trabalho é a classe dos modelos de difusão, uma classe de redes neurais generativas que nos últimos anos têm mostrado resultados excepcionais na tarefa de super-resolução em muitas aplicações, incluindo na área médica. O método proposto foi capaz de melhorar as métricas de difusão obtidas com poucas direções de gradiente de difusão (8 direções- 6 DWIs + 2 b0s). Como foi utilizada a imagem por tensor de difusão, a anisotropia fracionada é a métrica mais sensível ao número de direções, e nesta métrica houve melhoria tanto visualmente, quanto nas métricas de avaliação propostas (SSIM aumentou de 0.7182 para 0.8028, PSNR de 16.19 para 19.52, a diferença nos valores da mediana diminuiram de 46.42% para 14.54%, e a proporção de voxels com diferença estatística no TBSS reduziu de 58.17% para 53.77%). No entanto, a abordagem também incorre em alto custo computacional e, devido a potenciais alucinações de IA generativa, é mais adequada para aplicações que dependem de valores estatísticos ao invés de interpretação visual das imagens.Biblioteca Digitais de Teses e Dissertações da USPVieira, Marcelo Andrade da CostaÁvila, André Riesco de2026-01-16info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttps://www.teses.usp.br/teses/disponiveis/18/18152/tde-10032026-141324/reponame:Biblioteca Digital de Teses e Dissertações da USPinstname:Universidade de São Paulo (USP)instacron:USPLiberar o conteúdo para acesso público.info:eu-repo/semantics/openAccesseng2026-03-18T12:03:02Zoai:teses.usp.br:tde-10032026-141324Biblioteca Digital de Teses e Dissertaçõeshttp://www.teses.usp.br/PUBhttp://www.teses.usp.br/cgi-bin/mtd2br.plvirginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.bropendoar:27212026-03-18T12:03:02Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)false |
| dc.title.none.fl_str_mv |
Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic models Super-resolução angular em ressonância magnética ponderada por difusão utilizando modelos probabilísticos de difusão |
| title |
Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic models |
| spellingShingle |
Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic models Ávila, André Riesco de angular super-resolution diffusion models diffusion MRI diminuição do tempo de aquisição magnetic resonance imaging modelos probabilísticos de difusão redes neurais de super-resolução reduce acquisition time ressonância magnética RM de difusão super-resolução angular super-resolution neural networks |
| title_short |
Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic models |
| title_full |
Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic models |
| title_fullStr |
Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic models |
| title_full_unstemmed |
Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic models |
| title_sort |
Angular super-resolution in diffusion-weighted magnetic resonance imaging using diffusion probabilistic models |
| author |
Ávila, André Riesco de |
| author_facet |
Ávila, André Riesco de |
| author_role |
author |
| dc.contributor.none.fl_str_mv |
Vieira, Marcelo Andrade da Costa |
| dc.contributor.author.fl_str_mv |
Ávila, André Riesco de |
| dc.subject.por.fl_str_mv |
angular super-resolution diffusion models diffusion MRI diminuição do tempo de aquisição magnetic resonance imaging modelos probabilísticos de difusão redes neurais de super-resolução reduce acquisition time ressonância magnética RM de difusão super-resolução angular super-resolution neural networks |
| topic |
angular super-resolution diffusion models diffusion MRI diminuição do tempo de aquisição magnetic resonance imaging modelos probabilísticos de difusão redes neurais de super-resolução reduce acquisition time ressonância magnética RM de difusão super-resolução angular super-resolution neural networks |
| description |
Magnetic resonance imaging is a technique capable of producing high-quality images of the human body, being the gold standard in medical imaging for many parts of the body, specially for soft tissues like the brain. Also, it does not expose the patient to ionizing radiation like in X-rays and CT-scans. MRI scans, however, are more expensive and have longer acquisition times when compared to the other methods. Leveraging the MRI technology, it is also possible to obtain images that provide information like the diffusion of water molecules in the brain (diffusion MRI), which can be very useful for detecting earlier strokes and making diagnostics of diseases such as migraine. Diffusion MRI, however, needs to acquire images in many diffusion gradient directions, which take a long time to acquire, on the order of several minutes to more than an hour. To reduce this acquisition time, it is possible to reduce the resolution of the image acquired or reduce the number of diffusion gradient directions. On recent years, deep learning techniques have shown great results on improving the quality of diffusion magnetic resonance imaging with less resolution or less diffusion gradient directions. Based on that, this work proposes a novel method of improving the quality of diffusion MRI with less diffusion gradient directions acquired, by performing angular super-resolution through the use of a super-resolution neural network. The super-resolution neural network used in this work is of the class diffusion models, a class of generative neural-networks that in recent years have been showing outstanding results in the super-resolution task in many applications, and also in many other tasks like denoising and segmentation in medical imaging and even more specifically in MRI. The proposed method was able to improve diffusion metrics obtained with few diffusion gradient directions (8 directions- 6 DWIs + 2 b0s). As diffusion tensor imaging (DTI) was used, fractional anisotropy is the metric most sensitive to number of directions, and in this metric it improved both visually and on the evaluation metrics proposed (SSIM increased from 0.7182 to 0.8028, PSNR from 16.19 to 19.52, the difference in the median values decreased from 46.42% to 14.54%, and ratio of voxels with statistical difference in TBSS reduced from 58.17% to 53.77%). However, the approach also incurs high computational cost and, due to potential generative-AI hallucinations, is best suited for applications that rely on summary statistics rather than direct image interpretation. |
| publishDate |
2026 |
| dc.date.none.fl_str_mv |
2026-01-16 |
| dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
| format |
masterThesis |
| status_str |
publishedVersion |
| dc.identifier.uri.fl_str_mv |
https://www.teses.usp.br/teses/disponiveis/18/18152/tde-10032026-141324/ |
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https://www.teses.usp.br/teses/disponiveis/18/18152/tde-10032026-141324/ |
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eng |
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eng |
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|
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Liberar o conteúdo para acesso público. info:eu-repo/semantics/openAccess |
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Liberar o conteúdo para acesso público. |
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openAccess |
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application/pdf |
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|
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Biblioteca Digitais de Teses e Dissertações da USP |
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Biblioteca Digitais de Teses e Dissertações da USP |
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reponame:Biblioteca Digital de Teses e Dissertações da USP instname:Universidade de São Paulo (USP) instacron:USP |
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Universidade de São Paulo (USP) |
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USP |
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USP |
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Biblioteca Digital de Teses e Dissertações da USP |
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Biblioteca Digital de Teses e Dissertações da USP |
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Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP) |
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virginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.br |
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