Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA
| Ano de defesa: | 2024 |
|---|---|
| Autor(a) principal: | |
| Orientador(a): | |
| Banca de defesa: | |
| Tipo de documento: | Tese |
| Tipo de acesso: | Acesso aberto |
| Idioma: | por |
| Instituição de defesa: |
Universidade Federal de São Carlos
Câmpus São Carlos |
| Programa de Pós-Graduação: |
Programa de Pós-Graduação em Biotecnologia - PPGBiotec
|
| Departamento: |
Não Informado pela instituição
|
| País: |
Não Informado pela instituição
|
| Palavras-chave em Português: | |
| Palavras-chave em Inglês: | |
| Área do conhecimento CNPq: | |
| Link de acesso: | https://repositorio.ufscar.br/handle/20.500.14289/21086 |
Resumo: | In the present work, the binding mode and molecular interactions between thyroid hormones (T4, T3 and the positional isomers of T3 – T3IP) and the transporter protein (HSA) were investigated. T4 has 4 iodine atoms and T3 has 3. Analysis of the crystallographic structures of the T4-HSA complexes (1HK1,1HK2-R218H, 1HK3-R218P - with fatty acids and 1HK4, 1HK5-R218H- without fatty acids) was carried out. The knowledge acquired was used in the study of molecular docking to understand T3 since there is no crystallographic structure of HSA with T3, with T3 being the active form of thyroid hormone in target cells. It was observed that HSA is capable of differentiating T4 from T3. Another important point was to study 3 cases of HSA-T4 and HSA-T3 complexes, R128, R218H, R218P and explain the difference in HSA-hormonal ligand affinity. In the case of the T3 ligand, which has 3 iodine atoms, with a specific position, 4 positional isomers, T3IP, were evaluated. Docking studies showed that these compounds are different compared to HSA. The presence of fatty acids in the crystallographic complexes of the native protein and R218H mutant protein affected the availability of binding sites, limiting the interaction with T4 to a single site (Cleft). The analysis of T3 positional isomers (T3IP) showed that the structural flexibility of the ligands is an important factor in determining interactions with HSA. The findings of this study can be applied in the development of therapeutic strategies aimed at transporting thyroid hormones in conditions of genetic mutations or metabolic disorders. Detailed understanding of the differences in affinity between T3 and T4 and the influence of mutations in HSA provides a solid basis for future research focused on modulating the bioavailability of these hormones. The results presented here serve as a starting point for experimental investigations that can validate the trends observed in silico studies and explore new applications in the field of endocrinology and biotechnology. |
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Barbosa, Elisa GuimarãesCaracelli, Ignezhttp://lattes.cnpq.br/8956527354576143Freire, Thales Souzahttp://lattes.cnpq.br/0320608221793070http://lattes.cnpq.br/71398391058512512024-11-29T19:30:54Z2024-11-29T19:30:54Z2024-11-06BARBOSA, Elisa Guimarães. Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA. 2024. Tese (Doutorado em Biotecnologia) – Universidade Federal de São Carlos, São Carlos, 2024. Disponível em: https://repositorio.ufscar.br/handle/20.500.14289/21086.https://repositorio.ufscar.br/handle/20.500.14289/21086In the present work, the binding mode and molecular interactions between thyroid hormones (T4, T3 and the positional isomers of T3 – T3IP) and the transporter protein (HSA) were investigated. T4 has 4 iodine atoms and T3 has 3. Analysis of the crystallographic structures of the T4-HSA complexes (1HK1,1HK2-R218H, 1HK3-R218P - with fatty acids and 1HK4, 1HK5-R218H- without fatty acids) was carried out. The knowledge acquired was used in the study of molecular docking to understand T3 since there is no crystallographic structure of HSA with T3, with T3 being the active form of thyroid hormone in target cells. It was observed that HSA is capable of differentiating T4 from T3. Another important point was to study 3 cases of HSA-T4 and HSA-T3 complexes, R128, R218H, R218P and explain the difference in HSA-hormonal ligand affinity. In the case of the T3 ligand, which has 3 iodine atoms, with a specific position, 4 positional isomers, T3IP, were evaluated. Docking studies showed that these compounds are different compared to HSA. The presence of fatty acids in the crystallographic complexes of the native protein and R218H mutant protein affected the availability of binding sites, limiting the interaction with T4 to a single site (Cleft). The analysis of T3 positional isomers (T3IP) showed that the structural flexibility of the ligands is an important factor in determining interactions with HSA. The findings of this study can be applied in the development of therapeutic strategies aimed at transporting thyroid hormones in conditions of genetic mutations or metabolic disorders. Detailed understanding of the differences in affinity between T3 and T4 and the influence of mutations in HSA provides a solid basis for future research focused on modulating the bioavailability of these hormones. The results presented here serve as a starting point for experimental investigations that can validate the trends observed in silico studies and explore new applications in the field of endocrinology and biotechnology.No presente trabalho, foram investigados os modos de ligação e as interações moleculares entre os hormônios tireoidianos (T4, T3 e os isômeros posicionais do T3 – T3IP) e a proteína transportadora (HSA). O T4 possui 4 átomos de iodo e o T3 possui 3. Foi realizada a análise das estruturas cristalográficas dos complexos T4-HSA (1HK1,1HK2 R218H, 1HK3-R218P - com ácidos graxos e 1HK4, 1HK5-R218H- sem ácidos graxos). O conhecimento adquirido foi utilizado no estudo do docking molecular para entender o comportamento do T3, uma vez que não há estrutura cristalográfica do HSA com o T3, sendo que o T3 é a forma ativa do hormônio tireoidiano nas células-alvo. Foi observado que o HSA é capaz de diferenciar o T4 do T3. Outro ponto importante foi estudar 3 casos de complexos HSA-T4 e HSA-T3, com R128, R218H, R218P e explicar a diferença na afinidade HSA-ligante hormonal. No caso do ligante T3, que possui 3 átomos de iodo, com posição específica, foram avaliados 4 isômeros posicionais, T3IP. Estudos de docking mostraram que esses compostos apresentam comportamentos diferentes com a HSA. A presença de ácidos graxos nos complexos cristalográficos da proteína nativa e da proteína mutante R218H afetou a disponibilidade de sítios de ligação, limitando a interação com T4 a um único sítio (Cleft). A análise dos isômeros posicionais de T3 (T3IP) mostrou que a flexibilidade estrutural dos ligantes é um fator importante na determinação das interações com HSA. Os achados deste estudo podem ser aplicados no desenvolvimento de estratégias terapêuticas voltadas ao transporte de hormônios tireoidianos em condições de mutações genéticas ou distúrbios metabólicos. A compreensão detalhada das diferenças de afinidade entre T3 e T4 e a influência de mutações na HSA fornecem uma base sólida para futuras pesquisas focadas na modulação da biodisponibilidade desses hormônios. Os resultados apresentados aqui servem como ponto de partida para investigações experimentais que possam validar as tendências observadas nos estudos in silico e explorar novas aplicações no campo da endocrinologia e biotecnologia.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Processo nº 88887.466925/2019-00porUniversidade Federal de São CarlosCâmpus São CarlosPrograma de Pós-Graduação em Biotecnologia - PPGBiotecUFSCarAttribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAlbumina Sérica Humana (HSA)Dinâmica molecularInterações proteína liganteHormônios tireoidianosAlbumin Serum Human (HSA)Molecular dynamicsProtein-ligand interactionsThyroid hormonesCIENCIAS BIOLOGICAS::BIOFISICAEstudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSAIn silico studies of the binding modes of thyroid hormones T3 and T4 with the HSA Human Serum Albumin Transport Proteininfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisreponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARTEXTTeseFinalElisa.pdf.txtTeseFinalElisa.pdf.txtExtracted texttext/plain104253https://repositorio.ufscar.br/bitstreams/6ef72a9b-ed99-49a0-9875-3b083b8b9521/downloada20c076e48782b119572874f2fda3d85MD53falseAnonymousREADTHUMBNAILTeseFinalElisa.pdf.jpgTeseFinalElisa.pdf.jpgGenerated Thumbnailimage/jpeg6614https://repositorio.ufscar.br/bitstreams/16c34b6f-0185-498f-bc6d-6c08628bf416/download50b7dd6166c8b42caccaf4f1ca253406MD54falseAnonymousREADORIGINALTeseFinalElisa.pdfTeseFinalElisa.pdfTeseapplication/pdf16194077https://repositorio.ufscar.br/bitstreams/a5f2fc45-40c3-4bc9-83d0-369c3c641f3e/download2b6f71401c9585a0c0427d99a722b4f1MD51trueAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8810https://repositorio.ufscar.br/bitstreams/d4667970-63dd-47cb-8b51-dc78086c04bb/downloadf337d95da1fce0a22c77480e5e9a7aecMD52falseAnonymousREAD20.500.14289/210862025-02-06 04:16:14.787http://creativecommons.org/licenses/by-nc-nd/3.0/br/Attribution-NonCommercial-NoDerivs 3.0 Brazilopen.accessoai:repositorio.ufscar.br:20.500.14289/21086https://repositorio.ufscar.brRepositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestrepositorio.sibi@ufscar.bropendoar:43222025-02-06T07:16:14Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false |
| dc.title.por.fl_str_mv |
Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA |
| dc.title.alternative.eng.fl_str_mv |
In silico studies of the binding modes of thyroid hormones T3 and T4 with the HSA Human Serum Albumin Transport Protein |
| title |
Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA |
| spellingShingle |
Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA Barbosa, Elisa Guimarães Albumina Sérica Humana (HSA) Dinâmica molecular Interações proteína ligante Hormônios tireoidianos Albumin Serum Human (HSA) Molecular dynamics Protein-ligand interactions Thyroid hormones CIENCIAS BIOLOGICAS::BIOFISICA |
| title_short |
Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA |
| title_full |
Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA |
| title_fullStr |
Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA |
| title_full_unstemmed |
Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA |
| title_sort |
Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA |
| author |
Barbosa, Elisa Guimarães |
| author_facet |
Barbosa, Elisa Guimarães |
| author_role |
author |
| dc.contributor.authorlattes.por.fl_str_mv |
http://lattes.cnpq.br/7139839105851251 |
| dc.contributor.author.fl_str_mv |
Barbosa, Elisa Guimarães |
| dc.contributor.advisor1.fl_str_mv |
Caracelli, Ignez |
| dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/8956527354576143 |
| dc.contributor.advisor-co1.fl_str_mv |
Freire, Thales Souza |
| dc.contributor.advisor-co1Lattes.fl_str_mv |
http://lattes.cnpq.br/0320608221793070 |
| contributor_str_mv |
Caracelli, Ignez Freire, Thales Souza |
| dc.subject.por.fl_str_mv |
Albumina Sérica Humana (HSA) Dinâmica molecular Interações proteína ligante Hormônios tireoidianos |
| topic |
Albumina Sérica Humana (HSA) Dinâmica molecular Interações proteína ligante Hormônios tireoidianos Albumin Serum Human (HSA) Molecular dynamics Protein-ligand interactions Thyroid hormones CIENCIAS BIOLOGICAS::BIOFISICA |
| dc.subject.eng.fl_str_mv |
Albumin Serum Human (HSA) Molecular dynamics Protein-ligand interactions Thyroid hormones |
| dc.subject.cnpq.fl_str_mv |
CIENCIAS BIOLOGICAS::BIOFISICA |
| description |
In the present work, the binding mode and molecular interactions between thyroid hormones (T4, T3 and the positional isomers of T3 – T3IP) and the transporter protein (HSA) were investigated. T4 has 4 iodine atoms and T3 has 3. Analysis of the crystallographic structures of the T4-HSA complexes (1HK1,1HK2-R218H, 1HK3-R218P - with fatty acids and 1HK4, 1HK5-R218H- without fatty acids) was carried out. The knowledge acquired was used in the study of molecular docking to understand T3 since there is no crystallographic structure of HSA with T3, with T3 being the active form of thyroid hormone in target cells. It was observed that HSA is capable of differentiating T4 from T3. Another important point was to study 3 cases of HSA-T4 and HSA-T3 complexes, R128, R218H, R218P and explain the difference in HSA-hormonal ligand affinity. In the case of the T3 ligand, which has 3 iodine atoms, with a specific position, 4 positional isomers, T3IP, were evaluated. Docking studies showed that these compounds are different compared to HSA. The presence of fatty acids in the crystallographic complexes of the native protein and R218H mutant protein affected the availability of binding sites, limiting the interaction with T4 to a single site (Cleft). The analysis of T3 positional isomers (T3IP) showed that the structural flexibility of the ligands is an important factor in determining interactions with HSA. The findings of this study can be applied in the development of therapeutic strategies aimed at transporting thyroid hormones in conditions of genetic mutations or metabolic disorders. Detailed understanding of the differences in affinity between T3 and T4 and the influence of mutations in HSA provides a solid basis for future research focused on modulating the bioavailability of these hormones. The results presented here serve as a starting point for experimental investigations that can validate the trends observed in silico studies and explore new applications in the field of endocrinology and biotechnology. |
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2024 |
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2024-11-29T19:30:54Z |
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2024-11-29T19:30:54Z |
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2024-11-06 |
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BARBOSA, Elisa Guimarães. Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA. 2024. Tese (Doutorado em Biotecnologia) – Universidade Federal de São Carlos, São Carlos, 2024. Disponível em: https://repositorio.ufscar.br/handle/20.500.14289/21086. |
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https://repositorio.ufscar.br/handle/20.500.14289/21086 |
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BARBOSA, Elisa Guimarães. Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA. 2024. Tese (Doutorado em Biotecnologia) – Universidade Federal de São Carlos, São Carlos, 2024. Disponível em: https://repositorio.ufscar.br/handle/20.500.14289/21086. |
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Universidade Federal de São Carlos Câmpus São Carlos |
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