Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA

Detalhes bibliográficos
Ano de defesa: 2024
Autor(a) principal: Barbosa, Elisa Guimarães
Orientador(a): Caracelli, Ignez lattes
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de São Carlos
Câmpus São Carlos
Programa de Pós-Graduação: Programa de Pós-Graduação em Biotecnologia - PPGBiotec
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: https://repositorio.ufscar.br/handle/20.500.14289/21086
Resumo: In the present work, the binding mode and molecular interactions between thyroid hormones (T4, T3 and the positional isomers of T3 – T3IP) and the transporter protein (HSA) were investigated. T4 has 4 iodine atoms and T3 has 3. Analysis of the crystallographic structures of the T4-HSA complexes (1HK1,1HK2-R218H, 1HK3-R218P - with fatty acids and 1HK4, 1HK5-R218H- without fatty acids) was carried out. The knowledge acquired was used in the study of molecular docking to understand T3 since there is no crystallographic structure of HSA with T3, with T3 being the active form of thyroid hormone in target cells. It was observed that HSA is capable of differentiating T4 from T3. Another important point was to study 3 cases of HSA-T4 and HSA-T3 complexes, R128, R218H, R218P and explain the difference in HSA-hormonal ligand affinity. In the case of the T3 ligand, which has 3 iodine atoms, with a specific position, 4 positional isomers, T3IP, were evaluated. Docking studies showed that these compounds are different compared to HSA. The presence of fatty acids in the crystallographic complexes of the native protein and R218H mutant protein affected the availability of binding sites, limiting the interaction with T4 to a single site (Cleft). The analysis of T3 positional isomers (T3IP) showed that the structural flexibility of the ligands is an important factor in determining interactions with HSA. The findings of this study can be applied in the development of therapeutic strategies aimed at transporting thyroid hormones in conditions of genetic mutations or metabolic disorders. Detailed understanding of the differences in affinity between T3 and T4 and the influence of mutations in HSA provides a solid basis for future research focused on modulating the bioavailability of these hormones. The results presented here serve as a starting point for experimental investigations that can validate the trends observed in silico studies and explore new applications in the field of endocrinology and biotechnology.
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spelling Barbosa, Elisa GuimarãesCaracelli, Ignezhttp://lattes.cnpq.br/8956527354576143Freire, Thales Souzahttp://lattes.cnpq.br/0320608221793070http://lattes.cnpq.br/71398391058512512024-11-29T19:30:54Z2024-11-29T19:30:54Z2024-11-06BARBOSA, Elisa Guimarães. Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA. 2024. Tese (Doutorado em Biotecnologia) – Universidade Federal de São Carlos, São Carlos, 2024. Disponível em: https://repositorio.ufscar.br/handle/20.500.14289/21086.https://repositorio.ufscar.br/handle/20.500.14289/21086In the present work, the binding mode and molecular interactions between thyroid hormones (T4, T3 and the positional isomers of T3 – T3IP) and the transporter protein (HSA) were investigated. T4 has 4 iodine atoms and T3 has 3. Analysis of the crystallographic structures of the T4-HSA complexes (1HK1,1HK2-R218H, 1HK3-R218P - with fatty acids and 1HK4, 1HK5-R218H- without fatty acids) was carried out. The knowledge acquired was used in the study of molecular docking to understand T3 since there is no crystallographic structure of HSA with T3, with T3 being the active form of thyroid hormone in target cells. It was observed that HSA is capable of differentiating T4 from T3. Another important point was to study 3 cases of HSA-T4 and HSA-T3 complexes, R128, R218H, R218P and explain the difference in HSA-hormonal ligand affinity. In the case of the T3 ligand, which has 3 iodine atoms, with a specific position, 4 positional isomers, T3IP, were evaluated. Docking studies showed that these compounds are different compared to HSA. The presence of fatty acids in the crystallographic complexes of the native protein and R218H mutant protein affected the availability of binding sites, limiting the interaction with T4 to a single site (Cleft). The analysis of T3 positional isomers (T3IP) showed that the structural flexibility of the ligands is an important factor in determining interactions with HSA. The findings of this study can be applied in the development of therapeutic strategies aimed at transporting thyroid hormones in conditions of genetic mutations or metabolic disorders. Detailed understanding of the differences in affinity between T3 and T4 and the influence of mutations in HSA provides a solid basis for future research focused on modulating the bioavailability of these hormones. The results presented here serve as a starting point for experimental investigations that can validate the trends observed in silico studies and explore new applications in the field of endocrinology and biotechnology.No presente trabalho, foram investigados os modos de ligação e as interações moleculares entre os hormônios tireoidianos (T4, T3 e os isômeros posicionais do T3 – T3IP) e a proteína transportadora (HSA). O T4 possui 4 átomos de iodo e o T3 possui 3. Foi realizada a análise das estruturas cristalográficas dos complexos T4-HSA (1HK1,1HK2 R218H, 1HK3-R218P - com ácidos graxos e 1HK4, 1HK5-R218H- sem ácidos graxos). O conhecimento adquirido foi utilizado no estudo do docking molecular para entender o comportamento do T3, uma vez que não há estrutura cristalográfica do HSA com o T3, sendo que o T3 é a forma ativa do hormônio tireoidiano nas células-alvo. Foi observado que o HSA é capaz de diferenciar o T4 do T3. Outro ponto importante foi estudar 3 casos de complexos HSA-T4 e HSA-T3, com R128, R218H, R218P e explicar a diferença na afinidade HSA-ligante hormonal. No caso do ligante T3, que possui 3 átomos de iodo, com posição específica, foram avaliados 4 isômeros posicionais, T3IP. Estudos de docking mostraram que esses compostos apresentam comportamentos diferentes com a HSA. A presença de ácidos graxos nos complexos cristalográficos da proteína nativa e da proteína mutante R218H afetou a disponibilidade de sítios de ligação, limitando a interação com T4 a um único sítio (Cleft). A análise dos isômeros posicionais de T3 (T3IP) mostrou que a flexibilidade estrutural dos ligantes é um fator importante na determinação das interações com HSA. Os achados deste estudo podem ser aplicados no desenvolvimento de estratégias terapêuticas voltadas ao transporte de hormônios tireoidianos em condições de mutações genéticas ou distúrbios metabólicos. A compreensão detalhada das diferenças de afinidade entre T3 e T4 e a influência de mutações na HSA fornecem uma base sólida para futuras pesquisas focadas na modulação da biodisponibilidade desses hormônios. Os resultados apresentados aqui servem como ponto de partida para investigações experimentais que possam validar as tendências observadas nos estudos in silico e explorar novas aplicações no campo da endocrinologia e biotecnologia.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Processo nº 88887.466925/2019-00porUniversidade Federal de São CarlosCâmpus São CarlosPrograma de Pós-Graduação em Biotecnologia - PPGBiotecUFSCarAttribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAlbumina Sérica Humana (HSA)Dinâmica molecularInterações proteína liganteHormônios tireoidianosAlbumin Serum Human (HSA)Molecular dynamicsProtein-ligand interactionsThyroid hormonesCIENCIAS BIOLOGICAS::BIOFISICAEstudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSAIn silico studies of the binding modes of thyroid hormones T3 and T4 with the HSA Human Serum Albumin Transport Proteininfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisreponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARTEXTTeseFinalElisa.pdf.txtTeseFinalElisa.pdf.txtExtracted texttext/plain104253https://repositorio.ufscar.br/bitstreams/6ef72a9b-ed99-49a0-9875-3b083b8b9521/downloada20c076e48782b119572874f2fda3d85MD53falseAnonymousREADTHUMBNAILTeseFinalElisa.pdf.jpgTeseFinalElisa.pdf.jpgGenerated Thumbnailimage/jpeg6614https://repositorio.ufscar.br/bitstreams/16c34b6f-0185-498f-bc6d-6c08628bf416/download50b7dd6166c8b42caccaf4f1ca253406MD54falseAnonymousREADORIGINALTeseFinalElisa.pdfTeseFinalElisa.pdfTeseapplication/pdf16194077https://repositorio.ufscar.br/bitstreams/a5f2fc45-40c3-4bc9-83d0-369c3c641f3e/download2b6f71401c9585a0c0427d99a722b4f1MD51trueAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8810https://repositorio.ufscar.br/bitstreams/d4667970-63dd-47cb-8b51-dc78086c04bb/downloadf337d95da1fce0a22c77480e5e9a7aecMD52falseAnonymousREAD20.500.14289/210862025-02-06 04:16:14.787http://creativecommons.org/licenses/by-nc-nd/3.0/br/Attribution-NonCommercial-NoDerivs 3.0 Brazilopen.accessoai:repositorio.ufscar.br:20.500.14289/21086https://repositorio.ufscar.brRepositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestrepositorio.sibi@ufscar.bropendoar:43222025-02-06T07:16:14Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false
dc.title.por.fl_str_mv Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA
dc.title.alternative.eng.fl_str_mv In silico studies of the binding modes of thyroid hormones T3 and T4 with the HSA Human Serum Albumin Transport Protein
title Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA
spellingShingle Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA
Barbosa, Elisa Guimarães
Albumina Sérica Humana (HSA)
Dinâmica molecular
Interações proteína ligante
Hormônios tireoidianos
Albumin Serum Human (HSA)
Molecular dynamics
Protein-ligand interactions
Thyroid hormones
CIENCIAS BIOLOGICAS::BIOFISICA
title_short Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA
title_full Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA
title_fullStr Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA
title_full_unstemmed Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA
title_sort Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA
author Barbosa, Elisa Guimarães
author_facet Barbosa, Elisa Guimarães
author_role author
dc.contributor.authorlattes.por.fl_str_mv http://lattes.cnpq.br/7139839105851251
dc.contributor.author.fl_str_mv Barbosa, Elisa Guimarães
dc.contributor.advisor1.fl_str_mv Caracelli, Ignez
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/8956527354576143
dc.contributor.advisor-co1.fl_str_mv Freire, Thales Souza
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/0320608221793070
contributor_str_mv Caracelli, Ignez
Freire, Thales Souza
dc.subject.por.fl_str_mv Albumina Sérica Humana (HSA)
Dinâmica molecular
Interações proteína ligante
Hormônios tireoidianos
topic Albumina Sérica Humana (HSA)
Dinâmica molecular
Interações proteína ligante
Hormônios tireoidianos
Albumin Serum Human (HSA)
Molecular dynamics
Protein-ligand interactions
Thyroid hormones
CIENCIAS BIOLOGICAS::BIOFISICA
dc.subject.eng.fl_str_mv Albumin Serum Human (HSA)
Molecular dynamics
Protein-ligand interactions
Thyroid hormones
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::BIOFISICA
description In the present work, the binding mode and molecular interactions between thyroid hormones (T4, T3 and the positional isomers of T3 – T3IP) and the transporter protein (HSA) were investigated. T4 has 4 iodine atoms and T3 has 3. Analysis of the crystallographic structures of the T4-HSA complexes (1HK1,1HK2-R218H, 1HK3-R218P - with fatty acids and 1HK4, 1HK5-R218H- without fatty acids) was carried out. The knowledge acquired was used in the study of molecular docking to understand T3 since there is no crystallographic structure of HSA with T3, with T3 being the active form of thyroid hormone in target cells. It was observed that HSA is capable of differentiating T4 from T3. Another important point was to study 3 cases of HSA-T4 and HSA-T3 complexes, R128, R218H, R218P and explain the difference in HSA-hormonal ligand affinity. In the case of the T3 ligand, which has 3 iodine atoms, with a specific position, 4 positional isomers, T3IP, were evaluated. Docking studies showed that these compounds are different compared to HSA. The presence of fatty acids in the crystallographic complexes of the native protein and R218H mutant protein affected the availability of binding sites, limiting the interaction with T4 to a single site (Cleft). The analysis of T3 positional isomers (T3IP) showed that the structural flexibility of the ligands is an important factor in determining interactions with HSA. The findings of this study can be applied in the development of therapeutic strategies aimed at transporting thyroid hormones in conditions of genetic mutations or metabolic disorders. Detailed understanding of the differences in affinity between T3 and T4 and the influence of mutations in HSA provides a solid basis for future research focused on modulating the bioavailability of these hormones. The results presented here serve as a starting point for experimental investigations that can validate the trends observed in silico studies and explore new applications in the field of endocrinology and biotechnology.
publishDate 2024
dc.date.accessioned.fl_str_mv 2024-11-29T19:30:54Z
dc.date.available.fl_str_mv 2024-11-29T19:30:54Z
dc.date.issued.fl_str_mv 2024-11-06
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dc.identifier.citation.fl_str_mv BARBOSA, Elisa Guimarães. Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA. 2024. Tese (Doutorado em Biotecnologia) – Universidade Federal de São Carlos, São Carlos, 2024. Disponível em: https://repositorio.ufscar.br/handle/20.500.14289/21086.
dc.identifier.uri.fl_str_mv https://repositorio.ufscar.br/handle/20.500.14289/21086
identifier_str_mv BARBOSA, Elisa Guimarães. Estudos in silico dos modos de ligação dos hormônios tireoidianos T3 e T4 com a Proteína Transportadora Albumina Sérica Humana HSA. 2024. Tese (Doutorado em Biotecnologia) – Universidade Federal de São Carlos, São Carlos, 2024. Disponível em: https://repositorio.ufscar.br/handle/20.500.14289/21086.
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rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
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dc.publisher.none.fl_str_mv Universidade Federal de São Carlos
Câmpus São Carlos
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Biotecnologia - PPGBiotec
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