Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),

Detalhes bibliográficos
Ano de defesa: 2002
Autor(a) principal: Santos, Ana Cristina Souza dos lattes
Orientador(a): Sant'Anna, Carlos Mauricio Rabello de lattes
Banca de defesa: Sant'Anna, Carlos Mauricio Rabello de, Villar, Jos? Daniel Figueroa, Albuquerque, Magaly Gir?o, Echevarria, Aurea, Costa, Jo?o Batista Neves
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal Rural do Rio de Janeiro
Programa de Pós-Graduação: Programa de P?s-Gradua??o em Qu?mica
Departamento: Instituto de Ci?ncias Exatas
País: Brasil
Palavras-chave em Português:
Área do conhecimento CNPq:
Link de acesso: https://tede.ufrrj.br/jspui/handle/jspui/4305
Resumo: The dibenzoylhydrazines (DBHs) R11-5849, Rtt-5992 (tebulienozide), and RH-2485 (metoxifenozide) are non-steroidal agonists of 20-hydroxyecdysone (20E) insect hormone, that exert their insecticide eflect by interaction with the 20E receptor (EcR). Tebul?nozide and metoxifenozide are selectively toxic to lepidopteran species. In this theoretical study, the DBHs were firstly evaluated by a comparison with the natural agonist (20E) structure. In the next step, the RH-2485 selectivity towards Lepidoptera was studied with models of EcRs of the Lepidoptera Manduca Sexta, andof the Diptera Drosophila melanojzaster. The 3D structures of both EcRs were constructed by homology modeling with the SWISS-MODEL server. The models were constructed from crystallographic coordinates of related proteins ofthe nuclear receptor super Family, which includes the human receptors of vitamin D, retinoic acid, and thyroid hormone. The initial models, aPter a previous optimization by molecular mechanics, were simplified to an internal conserved region, the receptor ligand interaction site (I,IS), identified by comparison with original template proteins. Atter this step, it was implemented a rigid docking study of 20E inside the probable ligand interaction cavity (LIC) of the models. The M. sexta and D. melanogaster LICs were defined by the amino acids that could directly interact with the ligand. The same procedure was employed [br the DBHs RH-5849 and RH-2485. In order to evaluate the interaction pattern inside the EcR LICs, the enthalpy of interaction and the geometry of the ligand/LlC complexes were studied by the semiempirical approach. The ca[culated enthalpies associated with the interaction forces between the synthetic agonists and the amino acids of the LICs are in accordance with the experimental biological activity ofthe DBHs towards Lepidoptera and Diptera. In the following step, an interaction study between the M. sexta LIC (msEcR-LIC) and 10 additional DBHs was implemented to search for correlations between calculated enttlalpy terras associated with the interaction and pLDs0 experimental values of the synthetic agonists [SMAGGHE et al., 1999]. New DBH ligands with potential pesticide activity were proposed alter identification of the important groups for the EcR agonist activity. The interaction of the new ligands (RURAL-l, RURAL-2, and RURAL-3) with the msEcR-LIC amino acids resulted in quite favorable enthalpies, as compared to the known pesticides tebufenozide and metoxifenozide.
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spelling Sant'Anna, Carlos Mauricio Rabello dexxxxxxxxxxxxxxxhttp://lattes.cnpq.br/2087099684752643Sant'Anna, Carlos Mauricio Rabello deVillar, Jos? Daniel FigueroaAlbuquerque, Magaly Gir?oEchevarria, AureaCosta, Jo?o Batista Nevesxxxxxxxxxxxxxxxxxhttp://lattes.cnpq.br/4663575610102204Santos, Ana Cristina Souza dos2020-12-29T14:34:33Z2002-10-18Santos, Ana Cristina Souza dos. Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),. 2002. [87 f.]. Tese( Programa de P?s-Gradua??o em Qu?mica) - Universidade Federal Rural do Rio de Janeiro, [Serop?dica-RJ] .https://tede.ufrrj.br/jspui/handle/jspui/4305The dibenzoylhydrazines (DBHs) R11-5849, Rtt-5992 (tebulienozide), and RH-2485 (metoxifenozide) are non-steroidal agonists of 20-hydroxyecdysone (20E) insect hormone, that exert their insecticide eflect by interaction with the 20E receptor (EcR). Tebul?nozide and metoxifenozide are selectively toxic to lepidopteran species. In this theoretical study, the DBHs were firstly evaluated by a comparison with the natural agonist (20E) structure. In the next step, the RH-2485 selectivity towards Lepidoptera was studied with models of EcRs of the Lepidoptera Manduca Sexta, andof the Diptera Drosophila melanojzaster. The 3D structures of both EcRs were constructed by homology modeling with the SWISS-MODEL server. The models were constructed from crystallographic coordinates of related proteins ofthe nuclear receptor super Family, which includes the human receptors of vitamin D, retinoic acid, and thyroid hormone. The initial models, aPter a previous optimization by molecular mechanics, were simplified to an internal conserved region, the receptor ligand interaction site (I,IS), identified by comparison with original template proteins. Atter this step, it was implemented a rigid docking study of 20E inside the probable ligand interaction cavity (LIC) of the models. The M. sexta and D. melanogaster LICs were defined by the amino acids that could directly interact with the ligand. The same procedure was employed [br the DBHs RH-5849 and RH-2485. In order to evaluate the interaction pattern inside the EcR LICs, the enthalpy of interaction and the geometry of the ligand/LlC complexes were studied by the semiempirical approach. The ca[culated enthalpies associated with the interaction forces between the synthetic agonists and the amino acids of the LICs are in accordance with the experimental biological activity ofthe DBHs towards Lepidoptera and Diptera. In the following step, an interaction study between the M. sexta LIC (msEcR-LIC) and 10 additional DBHs was implemented to search for correlations between calculated enttlalpy terras associated with the interaction and pLDs0 experimental values of the synthetic agonists [SMAGGHE et al., 1999]. New DBH ligands with potential pesticide activity were proposed alter identification of the important groups for the EcR agonist activity. The interaction of the new ligands (RURAL-l, RURAL-2, and RURAL-3) with the msEcR-LIC amino acids resulted in quite favorable enthalpies, as compared to the known pesticides tebufenozide and metoxifenozide.As dibenzoilidrazinas RH-5849, RH-5992 e RH-2485 s?o agonista n?o esteroidais de 20-hidroxiecdisona (20E) e exerce seu efeito inseticida atrav?s da intera??o com o receptor de 20E (EcR). No entanto RH-5992 e RH-2485 s?o seletivamente t?xicos para lepid?pteros. O estudo da seletividade das DBHs RH-5992 e RH-2485 para lepid?ptero envolveu a avalia??o dos modelos do EcR de Manduca Sexta, um lepid?ptero, e o EcR de Drosophila melanogaster, um d?ptero, cujas estruturas 3D foram constru?das atrav?s de modelagem por homologia. Os modelos gerados por homologia para os EcRs das duas esp?cies de insetos foram constru?dos a partir de estruturas cristalogr?ficas de prote?nas pertencentes a supertiam?lia de receptores nucleares esteroidais, que incluem o receptores humano de ?cido retn?ico, vitamina D e o do horm?nio da tir?ide. Os modelos resultantes do alinhamento m?ltiplo entre as prote?nas apresentaram boa correla??o entre as estruturas moldes e as prote?nas-alvo, com aspecto bastante similar, sendo as mais importantes diferen?as relatadas para a seq??ncia terminal. A op??o pelo estudo a partir do modelo inicial foi baseado no foco do trabalho, que s? limita ? CIL, regi?o interna da prote?na, identiticada atrav?s das prote?nas moldes utilizadas e que s?o consideradas regi?es conservadas. Ap?s proposi??o do s?tio de intera??o com o ligante (SIL) dos EcRs modelados, foi realizada uma avalia??o pr?via dos modelos atrav?s do atracamento de 20E na poss?vel cavidade de intera??o com o ligante (CIL). As CILs de M. sexta e D. melanogaster foram definidas pelos amino?cidos que realmente poderiam interagir com o ligante. O mesmo procedimento foi envolvido com as DBHs. Para avaliar as diferen?as de intera??es nas CILs dos EcRs foram, consideradas a energia de intera??o e a geometria entre agonistas (ligantes) e as CILs, com o prop?sito de explicar a atividade e seletividade dessas mol?culas ti'ente ao receptor. Os c?lculos de entalpia associado com as for?as de intera??o entre os agonistas sint?ticos e os amino?cidos nos modelos das CILs revelaram resultados concordantes com a atividade biol?gica das DBHs para as esp?cies Lepid?ptera e D?ptera. O estudo da intera??o cavidade/ligante incluiu outras diferentes DBHs, atrav?s da busca de correla??es entre os diferentes termos de energia envolvidos na intera??o no modelo da cavidade de intera??o do receptor de ecdister?ide de M. sexta (msEcR-CIL) e os valores de pLD50 dos respectivos agonistas [SMAGGHE et al., 1999]. Novos ligames com poss?vel potencial pesticida foram constru?dos ap?s a identifica??o de grupos funcionais importantes para a atividade agonista de 20E. Os resultados de entalpia associado com as for?as de intera??o entre os novos ligantes (RURAL-l, RURAL-2, RURAL-3) e os amino?cidos nos modelos das CILs revelaram resultados significativos, comparado aos resultados do complexo entre RH-2485 e a CIL do EcR de M. sexta (msEcR-CIL).Submitted by Celso Magalhaes (celsomagalhaes@ufrrj.br) on 2020-12-29T14:34:33Z No. of bitstreams: 1 2002 - Ana Cristina Souza dos Santos.pdf: 7125057 bytes, checksum: 0bb48cd47b0ff5d2f07806407117ccbb (MD5)Made available in DSpace on 2020-12-29T14:34:33Z (GMT). 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dc.title.por.fl_str_mv Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),
dc.title.alternative.por.fl_str_mv ...
title Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),
spellingShingle Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),
Santos, Ana Cristina Souza dos
Qu?mica
Qu?mica
title_short Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),
title_full Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),
title_fullStr Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),
title_full_unstemmed Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),
title_sort Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),
author Santos, Ana Cristina Souza dos
author_facet Santos, Ana Cristina Souza dos
author_role author
dc.contributor.advisor1.fl_str_mv Sant'Anna, Carlos Mauricio Rabello de
dc.contributor.advisor1ID.fl_str_mv xxxxxxxxxxxxxxx
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/2087099684752643
dc.contributor.referee1.fl_str_mv Sant'Anna, Carlos Mauricio Rabello de
dc.contributor.referee2.fl_str_mv Villar, Jos? Daniel Figueroa
dc.contributor.referee3.fl_str_mv Albuquerque, Magaly Gir?o
dc.contributor.referee4.fl_str_mv Echevarria, Aurea
dc.contributor.referee5.fl_str_mv Costa, Jo?o Batista Neves
dc.contributor.authorID.fl_str_mv xxxxxxxxxxxxxxxxx
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/4663575610102204
dc.contributor.author.fl_str_mv Santos, Ana Cristina Souza dos
contributor_str_mv Sant'Anna, Carlos Mauricio Rabello de
Sant'Anna, Carlos Mauricio Rabello de
Villar, Jos? Daniel Figueroa
Albuquerque, Magaly Gir?o
Echevarria, Aurea
Costa, Jo?o Batista Neves
dc.subject.por.fl_str_mv Qu?mica
topic Qu?mica
Qu?mica
dc.subject.cnpq.fl_str_mv Qu?mica
description The dibenzoylhydrazines (DBHs) R11-5849, Rtt-5992 (tebulienozide), and RH-2485 (metoxifenozide) are non-steroidal agonists of 20-hydroxyecdysone (20E) insect hormone, that exert their insecticide eflect by interaction with the 20E receptor (EcR). Tebul?nozide and metoxifenozide are selectively toxic to lepidopteran species. In this theoretical study, the DBHs were firstly evaluated by a comparison with the natural agonist (20E) structure. In the next step, the RH-2485 selectivity towards Lepidoptera was studied with models of EcRs of the Lepidoptera Manduca Sexta, andof the Diptera Drosophila melanojzaster. The 3D structures of both EcRs were constructed by homology modeling with the SWISS-MODEL server. The models were constructed from crystallographic coordinates of related proteins ofthe nuclear receptor super Family, which includes the human receptors of vitamin D, retinoic acid, and thyroid hormone. The initial models, aPter a previous optimization by molecular mechanics, were simplified to an internal conserved region, the receptor ligand interaction site (I,IS), identified by comparison with original template proteins. Atter this step, it was implemented a rigid docking study of 20E inside the probable ligand interaction cavity (LIC) of the models. The M. sexta and D. melanogaster LICs were defined by the amino acids that could directly interact with the ligand. The same procedure was employed [br the DBHs RH-5849 and RH-2485. In order to evaluate the interaction pattern inside the EcR LICs, the enthalpy of interaction and the geometry of the ligand/LlC complexes were studied by the semiempirical approach. The ca[culated enthalpies associated with the interaction forces between the synthetic agonists and the amino acids of the LICs are in accordance with the experimental biological activity ofthe DBHs towards Lepidoptera and Diptera. In the following step, an interaction study between the M. sexta LIC (msEcR-LIC) and 10 additional DBHs was implemented to search for correlations between calculated enttlalpy terras associated with the interaction and pLDs0 experimental values of the synthetic agonists [SMAGGHE et al., 1999]. New DBH ligands with potential pesticide activity were proposed alter identification of the important groups for the EcR agonist activity. The interaction of the new ligands (RURAL-l, RURAL-2, and RURAL-3) with the msEcR-LIC amino acids resulted in quite favorable enthalpies, as compared to the known pesticides tebufenozide and metoxifenozide.
publishDate 2002
dc.date.issued.fl_str_mv 2002-10-18
dc.date.accessioned.fl_str_mv 2020-12-29T14:34:33Z
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dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv Santos, Ana Cristina Souza dos. Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),. 2002. [87 f.]. Tese( Programa de P?s-Gradua??o em Qu?mica) - Universidade Federal Rural do Rio de Janeiro, [Serop?dica-RJ] .
dc.identifier.uri.fl_str_mv https://tede.ufrrj.br/jspui/handle/jspui/4305
identifier_str_mv Santos, Ana Cristina Souza dos. Estudo semi-emp?rico da intera??o de 20-hidroxiecdisona e seus agonistas sint?ticos com modelos de homologia de receptores de ecdister?ide (EcR),. 2002. [87 f.]. Tese( Programa de P?s-Gradua??o em Qu?mica) - Universidade Federal Rural do Rio de Janeiro, [Serop?dica-RJ] .
url https://tede.ufrrj.br/jspui/handle/jspui/4305
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dc.publisher.none.fl_str_mv Universidade Federal Rural do Rio de Janeiro
dc.publisher.program.fl_str_mv Programa de P?s-Gradua??o em Qu?mica
dc.publisher.initials.fl_str_mv UFRRJ
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Instituto de Ci?ncias Exatas
publisher.none.fl_str_mv Universidade Federal Rural do Rio de Janeiro
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