Amidas aromáticas como modelos supramoleculares: de polimorfos a cocristais

Detalhes bibliográficos
Ano de defesa: 2022
Autor(a) principal: Pagliari, Anderson Berti lattes
Orientador(a): Bonacorso, Helio Gauze lattes
Banca de defesa: Tirloni, Bárbara, Fiss, Gabriela Fehn, Ducati, Lucas Colucci, Zanatta, Nilo
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Santa Maria
Centro de Ciências Naturais e Exatas
Programa de Pós-Graduação: Programa de Pós-Graduação em Química
Departamento: Química
País: Brasil
Palavras-chave em Português:
Palavras-chave em Inglês:
Área do conhecimento CNPq:
Link de acesso: http://repositorio.ufsm.br/handle/1/25868
Resumo: This work explores using aromatic amides as models for understanding the characteristics of packing in the solid-state arising from structural changes. These models were adopted for their molecular simplicity, allowing the restriction of packing effects and behaviors, with great relevance in the pharmaceutical industry. Results of interactions dispute, flexibility, topology, and summation of interactions modulate and compete with each other at the supramolecular level. This work aims to study the causes and consequences of these changes. Events in the solid-state with self-organized systems (self-associated or heteroassociated) are evaluated by studying the crystallization mechanisms of cocrystals, solvates, and polymorphs. Thus, supramolecular clustering was used as a demarcation in conjunction with theoretical and experimental tools to support the data presented. Crystallization mechanisms were also proposed. A scope of molecules containing only amides and phenyl/perfluorfenyl rings reveals a complementarity between NH···O=C and interactions ···, as could be observed in the formation of a new cocrystal. Aromatic rings similar in their atoms tend to make interactions ··· within the formed ribbons and CH(F)··· interactions between them; however, in the complementary presence of phenyl/perfluorfenyl, only ··· it was observed. This complementarity between aromatic rings also gave rise to a strong hydrogen bond of −11,21 kcal mol−1, more energetic than those found in similar cocrystals. Structural modifications in isoxazole-containing benzamides showed that each change led to changes in crystal packing. Amide and isoxazole tend to form NH···Nisox interactions via closed dimers. This case is not observed when exchanging the heterocycle (furan). Bulky groups such as tert-butyl and the absence of NH at the amide site also favor CH··· interactions and stacking, increasing the role of topology in these systems. Aromatic bisamides containing isoxazole have led to polymorphs and solvates. A key point for forming the polymorphs was the energetic similarity between the amide-amide and amide-isoxazole nuclei, which alternate with each other with a change in packing. The presence of DMSO in the medium provided sufficient energy and topology so that there was no competition with self-association, leading to the formation of a solvate. Thus, polymorphs are attributed to energy balance and conformational flexibility. This knowledge can be used to design new solids with desirable properties and characteristics.
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spelling 2022-08-11T15:10:50Z2022-08-11T15:10:50Z2022-05-06http://repositorio.ufsm.br/handle/1/25868This work explores using aromatic amides as models for understanding the characteristics of packing in the solid-state arising from structural changes. These models were adopted for their molecular simplicity, allowing the restriction of packing effects and behaviors, with great relevance in the pharmaceutical industry. Results of interactions dispute, flexibility, topology, and summation of interactions modulate and compete with each other at the supramolecular level. This work aims to study the causes and consequences of these changes. Events in the solid-state with self-organized systems (self-associated or heteroassociated) are evaluated by studying the crystallization mechanisms of cocrystals, solvates, and polymorphs. Thus, supramolecular clustering was used as a demarcation in conjunction with theoretical and experimental tools to support the data presented. Crystallization mechanisms were also proposed. A scope of molecules containing only amides and phenyl/perfluorfenyl rings reveals a complementarity between NH···O=C and interactions ···, as could be observed in the formation of a new cocrystal. Aromatic rings similar in their atoms tend to make interactions ··· within the formed ribbons and CH(F)··· interactions between them; however, in the complementary presence of phenyl/perfluorfenyl, only ··· it was observed. This complementarity between aromatic rings also gave rise to a strong hydrogen bond of −11,21 kcal mol−1, more energetic than those found in similar cocrystals. Structural modifications in isoxazole-containing benzamides showed that each change led to changes in crystal packing. Amide and isoxazole tend to form NH···Nisox interactions via closed dimers. This case is not observed when exchanging the heterocycle (furan). Bulky groups such as tert-butyl and the absence of NH at the amide site also favor CH··· interactions and stacking, increasing the role of topology in these systems. Aromatic bisamides containing isoxazole have led to polymorphs and solvates. A key point for forming the polymorphs was the energetic similarity between the amide-amide and amide-isoxazole nuclei, which alternate with each other with a change in packing. The presence of DMSO in the medium provided sufficient energy and topology so that there was no competition with self-association, leading to the formation of a solvate. Thus, polymorphs are attributed to energy balance and conformational flexibility. This knowledge can be used to design new solids with desirable properties and characteristics.Este trabalho explora a utilização de amidas aromáticas como modelos para compreensão das características de empacotamentos no estado sólido decorrentes de mudanças estruturais. Adotou-se estes modelos pela sua simplicidade molecular, possibilitando a restrição de efeitos e comportamentos no empacotamento, com grande relevância na indústria farmacêutica. Resultados de disputa entre interações, flexibilidade, topologia, e somatório de interações que modulam e competem entre si no âmbito supramolecular. Estudar as causas e consequências dessas mudanças é o objetivo deste trabalho. São avaliados eventos no estado sólido com sistemas auto-organizados (autoassociados ou heteroassociados) através de estudo de mecanismos de cristalização de cocristais, solvatos e polimorfos. Assim, utilizou-se o cluster supramolecular como demarcação, em conjunto com ferramentas teóricas e experimentais para suportar os dados apresentados. Mecanismos de cristalização também foram propostos. Um escopo de moléculas contendo apenas amidas e anéis fenil/perfluorfenil revelam uma complementaridade entre NH···O=C e interações ···, como pôde ser observado na formação de um novo cocristal. Os anéis aromáticos semelhantes em seus átomos têm uma tendência de fazerem interações ··· dentro das fitas formadas e CH(F)··· entre elas, contudo, na presença complementar de fenil/perfluorfenil, somente ··· foi observada. Esta complementariedade entre anéis aromáticos também fez surgir uma forte ligação de hidrogênio de −11,21 kcal mol−1, mais energéticas que as encontradas em cocristais semelhantes. Modificações estruturais em benzamidas contendo isoxazol mostraram cada alterações levaram a mudanças nos empacotamentos cristalinos. Amida e isoxazol tendem a formar interações NH···Nisox através de dímeros fechados, caso que não é observado ao trocar o heterociclo (furano). Grupos volumosos como tert-butil e ausência de NH no sítio da amida também favorecem interações CH··· e empilhamentos, aumentando o papel da topologia nesses sistemas. Bisamidas aromáticas contendo isoxazol levaram a obtenção de polimorfos e solvato. Um ponto-chave para a formação dos polimorfos foi a similaridade energética entre os núcleos amida-amida e amida-isoxazol, que se alternam entre si com mudança no empacotamento. A presença de DMSO no meio forneceu energia e topologia suficientes para que não houvesse competição com a autoassociação, levando à formação de um solvato. Assim, atribui-se a obtenção de polimorfos pelo equilíbrio energéticos e flexibilidade conformacional. O emprego destes conhecimentos pode ser utilizado para a projeção de novos sólidos com propriedades e características desejáveis.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESporUniversidade Federal de Santa MariaCentro de Ciências Naturais e ExatasPrograma de Pós-Graduação em QuímicaUFSMBrasilQuímicaAttribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessAmidasPolimorfosCocristaisQuímica supramolecularMecanismo de cristalizaçãoMecanismo de cristalizaçãoAmidesPolymorphsCocrystalsSupramolecular chemistryCrystallization mechanismCNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICAAmidas aromáticas como modelos supramoleculares: de polimorfos a cocristaisAromatic amides as supramolecular models: from polymorphs to cocrystalsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisBonacorso, Helio Gauzehttp://lattes.cnpq.br/7275608974248322Hörner, ManfredoTirloni, BárbaraFiss, Gabriela FehnDucati, Lucas ColucciZanatta, Nilohttp://lattes.cnpq.br/1160858609160308Pagliari, Anderson Berti10060000000060060060060060060060060006c852ad-d805-43c3-99d6-93a6a86f507c8c03bba8-b5a6-481f-a86e-57c37bd7264294410729-368d-4f5b-a6a4-f548b928abe9d616ae6f-f10b-4b8d-8598-c36995251939dea8c68c-cf04-46ff-bbf0-a9d1fe9003b816df9b2c-7c1c-4e0f-8caa-fd5fc8b15d72db72aa79-2ac0-4a18-90a9-823ea140938areponame:Biblioteca Digital de Teses e Dissertações do UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSMLICENSElicense.txtlicense.txttext/plain; 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dc.title.por.fl_str_mv Amidas aromáticas como modelos supramoleculares: de polimorfos a cocristais
dc.title.alternative.eng.fl_str_mv Aromatic amides as supramolecular models: from polymorphs to cocrystals
title Amidas aromáticas como modelos supramoleculares: de polimorfos a cocristais
spellingShingle Amidas aromáticas como modelos supramoleculares: de polimorfos a cocristais
Pagliari, Anderson Berti
Amidas
Polimorfos
Cocristais
Química supramolecular
Mecanismo de cristalização
Mecanismo de cristalização
Amides
Polymorphs
Cocrystals
Supramolecular chemistry
Crystallization mechanism
CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA
title_short Amidas aromáticas como modelos supramoleculares: de polimorfos a cocristais
title_full Amidas aromáticas como modelos supramoleculares: de polimorfos a cocristais
title_fullStr Amidas aromáticas como modelos supramoleculares: de polimorfos a cocristais
title_full_unstemmed Amidas aromáticas como modelos supramoleculares: de polimorfos a cocristais
title_sort Amidas aromáticas como modelos supramoleculares: de polimorfos a cocristais
author Pagliari, Anderson Berti
author_facet Pagliari, Anderson Berti
author_role author
dc.contributor.advisor1.fl_str_mv Bonacorso, Helio Gauze
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/7275608974248322
dc.contributor.advisor-co1.fl_str_mv Hörner, Manfredo
dc.contributor.referee1.fl_str_mv Tirloni, Bárbara
dc.contributor.referee2.fl_str_mv Fiss, Gabriela Fehn
dc.contributor.referee3.fl_str_mv Ducati, Lucas Colucci
dc.contributor.referee4.fl_str_mv Zanatta, Nilo
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/1160858609160308
dc.contributor.author.fl_str_mv Pagliari, Anderson Berti
contributor_str_mv Bonacorso, Helio Gauze
Hörner, Manfredo
Tirloni, Bárbara
Fiss, Gabriela Fehn
Ducati, Lucas Colucci
Zanatta, Nilo
dc.subject.por.fl_str_mv Amidas
Polimorfos
Cocristais
Química supramolecular
Mecanismo de cristalização
Mecanismo de cristalização
topic Amidas
Polimorfos
Cocristais
Química supramolecular
Mecanismo de cristalização
Mecanismo de cristalização
Amides
Polymorphs
Cocrystals
Supramolecular chemistry
Crystallization mechanism
CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA
dc.subject.eng.fl_str_mv Amides
Polymorphs
Cocrystals
Supramolecular chemistry
Crystallization mechanism
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA
description This work explores using aromatic amides as models for understanding the characteristics of packing in the solid-state arising from structural changes. These models were adopted for their molecular simplicity, allowing the restriction of packing effects and behaviors, with great relevance in the pharmaceutical industry. Results of interactions dispute, flexibility, topology, and summation of interactions modulate and compete with each other at the supramolecular level. This work aims to study the causes and consequences of these changes. Events in the solid-state with self-organized systems (self-associated or heteroassociated) are evaluated by studying the crystallization mechanisms of cocrystals, solvates, and polymorphs. Thus, supramolecular clustering was used as a demarcation in conjunction with theoretical and experimental tools to support the data presented. Crystallization mechanisms were also proposed. A scope of molecules containing only amides and phenyl/perfluorfenyl rings reveals a complementarity between NH···O=C and interactions ···, as could be observed in the formation of a new cocrystal. Aromatic rings similar in their atoms tend to make interactions ··· within the formed ribbons and CH(F)··· interactions between them; however, in the complementary presence of phenyl/perfluorfenyl, only ··· it was observed. This complementarity between aromatic rings also gave rise to a strong hydrogen bond of −11,21 kcal mol−1, more energetic than those found in similar cocrystals. Structural modifications in isoxazole-containing benzamides showed that each change led to changes in crystal packing. Amide and isoxazole tend to form NH···Nisox interactions via closed dimers. This case is not observed when exchanging the heterocycle (furan). Bulky groups such as tert-butyl and the absence of NH at the amide site also favor CH··· interactions and stacking, increasing the role of topology in these systems. Aromatic bisamides containing isoxazole have led to polymorphs and solvates. A key point for forming the polymorphs was the energetic similarity between the amide-amide and amide-isoxazole nuclei, which alternate with each other with a change in packing. The presence of DMSO in the medium provided sufficient energy and topology so that there was no competition with self-association, leading to the formation of a solvate. Thus, polymorphs are attributed to energy balance and conformational flexibility. This knowledge can be used to design new solids with desirable properties and characteristics.
publishDate 2022
dc.date.accessioned.fl_str_mv 2022-08-11T15:10:50Z
dc.date.available.fl_str_mv 2022-08-11T15:10:50Z
dc.date.issued.fl_str_mv 2022-05-06
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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url http://repositorio.ufsm.br/handle/1/25868
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rights_invalid_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
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dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
Centro de Ciências Naturais e Exatas
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Química
dc.publisher.initials.fl_str_mv UFSM
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Química
publisher.none.fl_str_mv Universidade Federal de Santa Maria
Centro de Ciências Naturais e Exatas
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