Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains

Detalhes bibliográficos
Ano de defesa: 2016
Autor(a) principal: Duarte, Christiane Eliza Motta
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: eng
Instituição de defesa: Universidade Federal de Viçosa
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: http://www.locus.ufv.br/handle/123456789/9366
Resumo: Lectins are involved in a wide range of biological mechanisms, including act as immunomodulatory agent able to activate the innate immunity. We purified and characterized a new lectin from cauliflower (Brassica oleracea ssp. botrytis - BOL) by three sequential chromatographic steps and confirmed the purity by SDS-PAGE. Additionally, we evaluated the role of the lectin in innate immunity by a phagocytosis assay, production of H 2 O 2 and NO. BOL was characterized as a non-glycosylated protein with a molecular mass of ~34 kDa in SDS-PAGE. To optimize the process of the lectin obtaining and allow further study of their structure and function, the molecular cloning and heterologous expression of BOL were carried out. Using total RNA extracted from cauliflower seedlings a Bol coding cDNA sequence of 1053 bp was isolated. Bioinformatics tools were used to determine a promoter sequence of 1000 bp of Bol which revealed several key cis-regulatory elements known to be involved in various plant stresses. Comparative expression analysis of tissue specific Bol demonstrated the highest transcript levels in leaves, as compared to stem and root tissues. Analysis of amino acid sequence and alignment with deduced homologous proteins allowed us to determine that the mature protein comprises 301 amino acids. Predicted three-dimensional structure confirmed that this lectin had an overall dome-like structure with two MATH-domains. This is the first report of isolation, cloning and bacterial expression of a lectin with MATH-domains and may be of significant interest to understand the regulatory role of this protein as immunostimulatory agent as well as to the physiology of the plant itself.
id UFV_40b536f83be6665ecdf6d2da640f6c87
oai_identifier_str oai:locus.ufv.br:123456789/9366
network_acronym_str UFV
network_name_str LOCUS Repositório Institucional da UFV
repository_id_str
spelling Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domainsLectina de Brassica oleracea: Isolamento, caracterização e avaliação funcional da primeira lectina com domínios MATHLectinasProteínasBrassica oleraceaBiologia GeralLectins are involved in a wide range of biological mechanisms, including act as immunomodulatory agent able to activate the innate immunity. We purified and characterized a new lectin from cauliflower (Brassica oleracea ssp. botrytis - BOL) by three sequential chromatographic steps and confirmed the purity by SDS-PAGE. Additionally, we evaluated the role of the lectin in innate immunity by a phagocytosis assay, production of H 2 O 2 and NO. BOL was characterized as a non-glycosylated protein with a molecular mass of ~34 kDa in SDS-PAGE. To optimize the process of the lectin obtaining and allow further study of their structure and function, the molecular cloning and heterologous expression of BOL were carried out. Using total RNA extracted from cauliflower seedlings a Bol coding cDNA sequence of 1053 bp was isolated. Bioinformatics tools were used to determine a promoter sequence of 1000 bp of Bol which revealed several key cis-regulatory elements known to be involved in various plant stresses. Comparative expression analysis of tissue specific Bol demonstrated the highest transcript levels in leaves, as compared to stem and root tissues. Analysis of amino acid sequence and alignment with deduced homologous proteins allowed us to determine that the mature protein comprises 301 amino acids. Predicted three-dimensional structure confirmed that this lectin had an overall dome-like structure with two MATH-domains. This is the first report of isolation, cloning and bacterial expression of a lectin with MATH-domains and may be of significant interest to understand the regulatory role of this protein as immunostimulatory agent as well as to the physiology of the plant itself.Lectinas estão envolvidas em uma ampla variedade de processos biológicos, inclusive atuando como agentes imunomoduladores capazes de ativar a imunidade inata. Nós purificamos e caracterizamos uma nova lectina de couve-flor (Brassica oleracea ssp. botrytis – BOL) através de três etapas sequenciais de cromatografia, cuja pureza foi confirmada por SDS-PAGE. Além disso, avaliamos o papel dessa lectina na imunidade inata por meio de um ensaio de fagocitose, produção de H 2 O 2 e NO. BOL foi caracterizada como uma proteína não glicosilada com uma massa molecular de ~ 34 kDa em SDS-PAGE. Para otimizar o processo de obtenção da lectina e possibilitar um estudo mais aprofundado de sua estrutura e função, realizou-se a clonagem molecular e expressão heteróloga de BOL. Para isso utilizamos RNA total extraído de plântulas de couve-flor e isolamos a sequência de 1053 pb do cDNA codificante. Ferramentas de bioinformática foram utilizadas para determinar a sequência promotora de 1000 pb de Bol, a qual revelou vários elementos cis-regulatórios conhecidos por estarem envolvidos em várias condições de estresse na planta. A análise comparativa tecido-específica da expressão de Bol demonstrou níveis mais elevados do transcrito nas folhas, em comparação aos tecidos do caule e da raiz. A análise da sequência de aminoácidos e o alinhamento com proteínas homólogas deduzidas nos permitiu determinar que a proteína madura é constituída por 301 aminoácidos. A estrutura tridimensional predita confirmou que esta lectina apresenta uma estrutura em forma de cúpula com dois domínios MATH. Este é o primeiro relato do isolamento, clonagem e expressão bacteriana de uma lectina com domínios MATH e pode ser de interesse significativo para compreender o papel regulador desta proteína como agente imunoestimulante bem como para à fisiologia da própria planta.Coordenação de Aperfeiçoamento de Pessoal de Nível SuperiorUniversidade Federal de ViçosaOliveira, Leandro Licursi dehttp://lattes.cnpq.br/7254476900493910Paula, Sérgio Oliveira deKoehler, Andréa DiasDuarte, Christiane Eliza Motta2017-01-23T12:20:24Z2017-01-23T12:20:24Z2016-09-16info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfDUARTE, Christiane Eliza Motta. Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains. 2016. 70 f. Tese (Doutorado em Biologia Celular e Estrutural) - Universidade Federal de Viçosa, Viçosa. 2016.http://www.locus.ufv.br/handle/123456789/9366enginfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFV2024-07-12T08:27:02Zoai:locus.ufv.br:123456789/9366Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452024-07-12T08:27:02LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.none.fl_str_mv Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains
Lectina de Brassica oleracea: Isolamento, caracterização e avaliação funcional da primeira lectina com domínios MATH
title Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains
spellingShingle Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains
Duarte, Christiane Eliza Motta
Lectinas
Proteínas
Brassica oleracea
Biologia Geral
title_short Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains
title_full Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains
title_fullStr Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains
title_full_unstemmed Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains
title_sort Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains
author Duarte, Christiane Eliza Motta
author_facet Duarte, Christiane Eliza Motta
author_role author
dc.contributor.none.fl_str_mv Oliveira, Leandro Licursi de
http://lattes.cnpq.br/7254476900493910
Paula, Sérgio Oliveira de
Koehler, Andréa Dias
dc.contributor.author.fl_str_mv Duarte, Christiane Eliza Motta
dc.subject.por.fl_str_mv Lectinas
Proteínas
Brassica oleracea
Biologia Geral
topic Lectinas
Proteínas
Brassica oleracea
Biologia Geral
description Lectins are involved in a wide range of biological mechanisms, including act as immunomodulatory agent able to activate the innate immunity. We purified and characterized a new lectin from cauliflower (Brassica oleracea ssp. botrytis - BOL) by three sequential chromatographic steps and confirmed the purity by SDS-PAGE. Additionally, we evaluated the role of the lectin in innate immunity by a phagocytosis assay, production of H 2 O 2 and NO. BOL was characterized as a non-glycosylated protein with a molecular mass of ~34 kDa in SDS-PAGE. To optimize the process of the lectin obtaining and allow further study of their structure and function, the molecular cloning and heterologous expression of BOL were carried out. Using total RNA extracted from cauliflower seedlings a Bol coding cDNA sequence of 1053 bp was isolated. Bioinformatics tools were used to determine a promoter sequence of 1000 bp of Bol which revealed several key cis-regulatory elements known to be involved in various plant stresses. Comparative expression analysis of tissue specific Bol demonstrated the highest transcript levels in leaves, as compared to stem and root tissues. Analysis of amino acid sequence and alignment with deduced homologous proteins allowed us to determine that the mature protein comprises 301 amino acids. Predicted three-dimensional structure confirmed that this lectin had an overall dome-like structure with two MATH-domains. This is the first report of isolation, cloning and bacterial expression of a lectin with MATH-domains and may be of significant interest to understand the regulatory role of this protein as immunostimulatory agent as well as to the physiology of the plant itself.
publishDate 2016
dc.date.none.fl_str_mv 2016-09-16
2017-01-23T12:20:24Z
2017-01-23T12:20:24Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv DUARTE, Christiane Eliza Motta. Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains. 2016. 70 f. Tese (Doutorado em Biologia Celular e Estrutural) - Universidade Federal de Viçosa, Viçosa. 2016.
http://www.locus.ufv.br/handle/123456789/9366
identifier_str_mv DUARTE, Christiane Eliza Motta. Brassica oleracea lectin: Isolation, characterization, and functional assessment of the first lectin with MATH domains. 2016. 70 f. Tese (Doutorado em Biologia Celular e Estrutural) - Universidade Federal de Viçosa, Viçosa. 2016.
url http://www.locus.ufv.br/handle/123456789/9366
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Viçosa
publisher.none.fl_str_mv Universidade Federal de Viçosa
dc.source.none.fl_str_mv reponame:LOCUS Repositório Institucional da UFV
instname:Universidade Federal de Viçosa (UFV)
instacron:UFV
instname_str Universidade Federal de Viçosa (UFV)
instacron_str UFV
institution UFV
reponame_str LOCUS Repositório Institucional da UFV
collection LOCUS Repositório Institucional da UFV
repository.name.fl_str_mv LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)
repository.mail.fl_str_mv fabiojreis@ufv.br
_version_ 1855045739681415168