Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular

Detalhes bibliográficos
Ano de defesa: 2016
Autor(a) principal: Abreu, Cínthia Bruno De lattes
Orientador(a): Orlando, Tereza Cristina lattes
Banca de defesa: Melão, Maria Da Graça Gama, Colombo, Fabio Antonio
Tipo de documento: Dissertação
Tipo de acesso: Acesso aberto
Idioma: por
Instituição de defesa: Universidade Federal de Alfenas
Programa de Pós-Graduação: Programa de Pós-Graduação em Ciências Ambientais
Departamento: Instituto de Ciências da Natureza
País: Brasil
Palavras-chave em Português:
Área do conhecimento CNPq:
Link de acesso: https://repositorio.unifal-mg.edu.br/handle/123456789/939
Resumo: Cladocerans are popularly known as water fleas, inhabit mainly freshwater aquatic environments and are considered good trophic indicators. These microcrustaceans have been used in basic and applied research, such as ecological, evolutionary and ecotoxicological studies. Morphological tools have been used to detect species richness of cladocerans from Minas Gerais, but given the difficulty of this morphological analysis, it is interesting to access this biodiversity by molecular tools as the DNA barcode. This molecular marker is based on a short segment of the mitochondrial gene cytochrome c oxidase subunit 1 (COI). It has been increasingly used in taxonomy, identification of cryptic species and diversity studies. In this context, we characterized the genetic diversity of Cladocera species from a point in the Furnas Hydroelectric Power Plant Resevoir and another in the Heliodora city (both in the south of Minas Gerais). This is the first molecular Cladocera inventory in Brazil, whose objective was to differentiate the Brazilian isolates of specimens from other countries, thus verifying taxonomic problems and cryptic species. We obtained sequences for 11 Cladocera species, distributed in Sididae, Daphnidae, Bosminidae and Chydoridae. The amplified fragments range from 493 to 659 base pairs, of which 90% were larger than 500 bp. Some of these COI sequences (for Bosmina freyi and Bosminopsis deitersi) represent the first molecular data in the world. We also found that the majority of Brazilian isolates are molecularly different from specimens from Mexico, Canada and Guatemala. For Daphnia laevis the genetic differences found between the Brazilian and Argentine isolates qualify them as members of the same taxonomic entity, reinforcing the concept of continental endemism. Besides the evaluation of diversity, with the determination of the COI for Ovalona kaingang (Cladocera: Chydoridae) we confirmed the morphological data, relocating the pulchella-group species to Ovalona, since the genetic differences between Ovalona and other species from the database were higher than 19.1%. Therefore, the use of DNA barcode was efficient to detect the genetic diversity of Cladocera specimens as a taxonomic tool. In the future our data can be applied to phylogenetic diversity studies, geographic distribution, biogeographic patterns and to assist in taxonomic revisions.
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spelling Abreu, Cínthia Bruno Dehttp://lattes.cnpq.br/2241302458113745Wisniewski, Maria José Dos SantosMelão, Maria Da Graça GamaColombo, Fabio AntonioOrlando, Tereza Cristinahttp://lattes.cnpq.br/94616214799022082017-04-04T00:21:21Z2016-02-26ABREU, Cínthia Bruno de. Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular. 2016. 83 f. Dissertação (Mestrado em Ciências Ambientais) - Universidade Federal de Alfenas, Alfenas, MG, 2016.https://repositorio.unifal-mg.edu.br/handle/123456789/939Cladocerans are popularly known as water fleas, inhabit mainly freshwater aquatic environments and are considered good trophic indicators. These microcrustaceans have been used in basic and applied research, such as ecological, evolutionary and ecotoxicological studies. Morphological tools have been used to detect species richness of cladocerans from Minas Gerais, but given the difficulty of this morphological analysis, it is interesting to access this biodiversity by molecular tools as the DNA barcode. This molecular marker is based on a short segment of the mitochondrial gene cytochrome c oxidase subunit 1 (COI). It has been increasingly used in taxonomy, identification of cryptic species and diversity studies. In this context, we characterized the genetic diversity of Cladocera species from a point in the Furnas Hydroelectric Power Plant Resevoir and another in the Heliodora city (both in the south of Minas Gerais). This is the first molecular Cladocera inventory in Brazil, whose objective was to differentiate the Brazilian isolates of specimens from other countries, thus verifying taxonomic problems and cryptic species. We obtained sequences for 11 Cladocera species, distributed in Sididae, Daphnidae, Bosminidae and Chydoridae. The amplified fragments range from 493 to 659 base pairs, of which 90% were larger than 500 bp. Some of these COI sequences (for Bosmina freyi and Bosminopsis deitersi) represent the first molecular data in the world. We also found that the majority of Brazilian isolates are molecularly different from specimens from Mexico, Canada and Guatemala. For Daphnia laevis the genetic differences found between the Brazilian and Argentine isolates qualify them as members of the same taxonomic entity, reinforcing the concept of continental endemism. Besides the evaluation of diversity, with the determination of the COI for Ovalona kaingang (Cladocera: Chydoridae) we confirmed the morphological data, relocating the pulchella-group species to Ovalona, since the genetic differences between Ovalona and other species from the database were higher than 19.1%. Therefore, the use of DNA barcode was efficient to detect the genetic diversity of Cladocera specimens as a taxonomic tool. In the future our data can be applied to phylogenetic diversity studies, geographic distribution, biogeographic patterns and to assist in taxonomic revisions.Os cladóceros são popularmente conhecidos como pulgas d’água, habitam principalmente ambientes aquáticos de água doce e são considerados bons indicadores tróficos. Esses microcrustáceos são usados tanto em pesquisas básicas, quanto aplicadas, como estudos ecológicos, evolutivos e ecotoxicológicos. A despeito da dificuldade na análise de caracteres morfológicos, uma grande riqueza de espécies de cladóceros já foi detectada em Minas Gerais usando essas ferramentas. Devido a essa dificuldade, ferramentas moleculares são cada vez mais aplicadas para acessar essa biodiversidade. Atualmente, o marcador molecular conhecido como Código de Barras do DNA – DNA barcode, que tem como base um segmento do gene mitocondrial, o citocromo c oxidase subunidade 1 (COI) tem sido cada vez mais utilizado na taxonomia, identificação de espécies crípticas e estudos de diversidade. Neste contexto, nós avaliamos a diversidade genética de espécies de Cladocera de um ponto do Reservatório da Usina Hidrelétrica de Furnas e outro no município de Heliodora (ambos no Sul de Minas Gerais). Este é o primeiro inventário molecular de Cladocera no Brasil, cujo objetivo foi conhecer a diversidade de espécimes brasileiros e compará-los geneticamente com exemplares de outros países, verificando, assim, problemas taxonômicos e existência de espécies crípticas. Obtivemos sequências para 11 espécies de Cladocera, distribuídas nas famílias Sididae, Daphnidae, Bosminidae e Chydoridae. Os fragmentos amplificados variaram de 493 a 659 pares de base, das quais 90% foram maiores que 500pb. Algumas destas sequências de COI (Bosmina freyi e Bosminopsis deitersi) constituem as primeiras da espécie no mundo. Ainda verificamos que a maioria dos isolados brasileiros são molecularmente diferentes dos espécimes do México, Canadá e Guatemala. Para Daphnia laevis as divergências genéticas obtidas entre o isolado brasileiro e o argentino as classificam como integrantes da mesma entidade taxonômica, dados esses que dão força ao conceito de endemismo continental. Além da avaliação da diversidade, com a determinação do COI de Ovalona kaingang (Cladocera: Chydoridae) confirmamos as análises morfológicas recentes que realocaram espécies do grupo pulchella para Ovalona, já que as divergências genéticas entre Ovalona e as outras espécies do banco de dados são superiores a 19,1%. Portanto, o uso do DNA barcode foi eficiente como marcador molecular tanto na detecção da diversidade genética dos espécimes de Cladocera, quanto como ferramenta taxonômica. Futuramente nossos dados poderão ser aplicados em estudos de diversidade filogenética, distribuição geográfica, padrões biogeográficos e auxiliar em revisões taxonômicas.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfporUniversidade Federal de AlfenasPrograma de Pós-Graduação em Ciências AmbientaisUNIFAL-MGBrasilInstituto de Ciências da Naturezainfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/4.0/CladoceraCódigo de Barras de DNA TaxonômicoVariação GenéticaZOOLOGIA::TAXONOMIA DOS GRUPOS RECENTESDiversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecularinfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/publishedVersion454226360311113921060060060012942750349020856672075167498588264571reponame:Biblioteca Digital de Teses e Dissertações da UNIFALinstname:Universidade Federal de Alfenas (UNIFAL)instacron:UNIFALAbreu, Cínthia Bruno DeLICENSElicense.txtlicense.txttext/plain; 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dc.title.pt-BR.fl_str_mv Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular
title Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular
spellingShingle Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular
Abreu, Cínthia Bruno De
Cladocera
Código de Barras de DNA Taxonômico
Variação Genética
ZOOLOGIA::TAXONOMIA DOS GRUPOS RECENTES
title_short Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular
title_full Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular
title_fullStr Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular
title_full_unstemmed Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular
title_sort Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular
author Abreu, Cínthia Bruno De
author_facet Abreu, Cínthia Bruno De
author_role author
dc.contributor.author.fl_str_mv Abreu, Cínthia Bruno De
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/2241302458113745
dc.contributor.advisor-co1.fl_str_mv Wisniewski, Maria José Dos Santos
dc.contributor.referee1.fl_str_mv Melão, Maria Da Graça Gama
dc.contributor.referee2.fl_str_mv Colombo, Fabio Antonio
dc.contributor.advisor1.fl_str_mv Orlando, Tereza Cristina
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/9461621479902208
contributor_str_mv Wisniewski, Maria José Dos Santos
Melão, Maria Da Graça Gama
Colombo, Fabio Antonio
Orlando, Tereza Cristina
dc.subject.por.fl_str_mv Cladocera
Código de Barras de DNA Taxonômico
Variação Genética
topic Cladocera
Código de Barras de DNA Taxonômico
Variação Genética
ZOOLOGIA::TAXONOMIA DOS GRUPOS RECENTES
dc.subject.cnpq.fl_str_mv ZOOLOGIA::TAXONOMIA DOS GRUPOS RECENTES
description Cladocerans are popularly known as water fleas, inhabit mainly freshwater aquatic environments and are considered good trophic indicators. These microcrustaceans have been used in basic and applied research, such as ecological, evolutionary and ecotoxicological studies. Morphological tools have been used to detect species richness of cladocerans from Minas Gerais, but given the difficulty of this morphological analysis, it is interesting to access this biodiversity by molecular tools as the DNA barcode. This molecular marker is based on a short segment of the mitochondrial gene cytochrome c oxidase subunit 1 (COI). It has been increasingly used in taxonomy, identification of cryptic species and diversity studies. In this context, we characterized the genetic diversity of Cladocera species from a point in the Furnas Hydroelectric Power Plant Resevoir and another in the Heliodora city (both in the south of Minas Gerais). This is the first molecular Cladocera inventory in Brazil, whose objective was to differentiate the Brazilian isolates of specimens from other countries, thus verifying taxonomic problems and cryptic species. We obtained sequences for 11 Cladocera species, distributed in Sididae, Daphnidae, Bosminidae and Chydoridae. The amplified fragments range from 493 to 659 base pairs, of which 90% were larger than 500 bp. Some of these COI sequences (for Bosmina freyi and Bosminopsis deitersi) represent the first molecular data in the world. We also found that the majority of Brazilian isolates are molecularly different from specimens from Mexico, Canada and Guatemala. For Daphnia laevis the genetic differences found between the Brazilian and Argentine isolates qualify them as members of the same taxonomic entity, reinforcing the concept of continental endemism. Besides the evaluation of diversity, with the determination of the COI for Ovalona kaingang (Cladocera: Chydoridae) we confirmed the morphological data, relocating the pulchella-group species to Ovalona, since the genetic differences between Ovalona and other species from the database were higher than 19.1%. Therefore, the use of DNA barcode was efficient to detect the genetic diversity of Cladocera specimens as a taxonomic tool. In the future our data can be applied to phylogenetic diversity studies, geographic distribution, biogeographic patterns and to assist in taxonomic revisions.
publishDate 2016
dc.date.issued.fl_str_mv 2016-02-26
dc.date.accessioned.fl_str_mv 2017-04-04T00:21:21Z
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dc.identifier.citation.fl_str_mv ABREU, Cínthia Bruno de. Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular. 2016. 83 f. Dissertação (Mestrado em Ciências Ambientais) - Universidade Federal de Alfenas, Alfenas, MG, 2016.
dc.identifier.uri.fl_str_mv https://repositorio.unifal-mg.edu.br/handle/123456789/939
identifier_str_mv ABREU, Cínthia Bruno de. Diversidade genética de cladocera (Crustacea: Branchiopoda) do Sul de Minas Gerais, utilizando DNA Barcode como marcador molecular. 2016. 83 f. Dissertação (Mestrado em Ciências Ambientais) - Universidade Federal de Alfenas, Alfenas, MG, 2016.
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MD5
repository.name.fl_str_mv Biblioteca Digital de Teses e Dissertações da UNIFAL - Universidade Federal de Alfenas (UNIFAL)
repository.mail.fl_str_mv bdtd@unifal-mg.edu.br || bdtd@unifal-mg.edu.br
_version_ 1850508382194106368