3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomography

Detalhes bibliográficos
Ano de defesa: 2019
Autor(a) principal: Peres, Lara Maldanis Cerqueira
Orientador(a): Não Informado pela instituição
Banca de defesa: Não Informado pela instituição
Tipo de documento: Tese
Tipo de acesso: Acesso aberto
Idioma: eng
Instituição de defesa: Biblioteca Digitais de Teses e Dissertações da USP
Programa de Pós-Graduação: Não Informado pela instituição
Departamento: Não Informado pela instituição
País: Não Informado pela instituição
Palavras-chave em Português:
Link de acesso: https://www.teses.usp.br/teses/disponiveis/76/76132/tde-22052020-151522/
Resumo: Precambrian microfossils are structures difficult to be investigated by means of conventional imaging approaches due to their small size, geochemical composition and relative scarcity that limits the use of destructive methods. One recurrent problem in the study of these earliest life forms relies on attesting their biogenicity given that structures formed abiotically can strongly resemble fossilized cells of simple morphology. The search of novel analytical methods for contributing to the evaluation of these ancient structures if of great importance for the development of the field of Precambrian paleobiology. In this work, the coherent X-ray imaging approach of ptychographic X-ray computed tomography is explored for assessing bona fide microfossils from the Gunflint and Draken Formations, and early Archean controversial structures described as fossil bacteria from the Hoogenoeg and Kromberg Formations of the Barberton Greenstone Belt. The microfossils were imaged non-destructively in 3D with nanometric resolution and quantitative electron density contrast, which allowed the estimation of mass density of the materials. The tomographic images provided information on both the morphology and geochemical composition of the specimens at the nanoscale within a microscale context. From the morphological data, it was possible to distinguish the 3D distribution of kerogenous material, which revealed a novel preservation pattern and traces of taphonomical alterations for filaments of Gunflint Formation, and ultrastructural details preserved in cell walls of specimen from Draken Formation. The mass density quantification provided supporting evidences, such as the discrimination of kerogen maturation states and identification of minerals, providing also a picture of the taphonomical history of the specimens. Based in the biogenicity criteria investigated at the nanoscale, we could not attest the biogenicity of the structures described in the Barberton Greenstone Belt, but we offered new possible interpretations of biological and biotic origins for the formation of these structures. The results represent significative advances for the comprehension of fossilized microorganisms and add important contribution for the assessment of biogenicity through a robust combination of morphological and geochemical 3D information from the nano to the micron-scale.
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spelling 3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomographyImageamento por raios-X em 3D de microfósseis Pré-Cambrianos: avaliando a biogenicidade na nanoescala com Tomografia Pticográfica de Raios-XBiogenicidadeBiogenicityMicrofósseis pré-cambrianosPaleobiologiaPaleobiologyPrecambrian microfossilsPtychographic X-ray computed tomographyTomografia pticográfica de Raios XPrecambrian microfossils are structures difficult to be investigated by means of conventional imaging approaches due to their small size, geochemical composition and relative scarcity that limits the use of destructive methods. One recurrent problem in the study of these earliest life forms relies on attesting their biogenicity given that structures formed abiotically can strongly resemble fossilized cells of simple morphology. The search of novel analytical methods for contributing to the evaluation of these ancient structures if of great importance for the development of the field of Precambrian paleobiology. In this work, the coherent X-ray imaging approach of ptychographic X-ray computed tomography is explored for assessing bona fide microfossils from the Gunflint and Draken Formations, and early Archean controversial structures described as fossil bacteria from the Hoogenoeg and Kromberg Formations of the Barberton Greenstone Belt. The microfossils were imaged non-destructively in 3D with nanometric resolution and quantitative electron density contrast, which allowed the estimation of mass density of the materials. The tomographic images provided information on both the morphology and geochemical composition of the specimens at the nanoscale within a microscale context. From the morphological data, it was possible to distinguish the 3D distribution of kerogenous material, which revealed a novel preservation pattern and traces of taphonomical alterations for filaments of Gunflint Formation, and ultrastructural details preserved in cell walls of specimen from Draken Formation. The mass density quantification provided supporting evidences, such as the discrimination of kerogen maturation states and identification of minerals, providing also a picture of the taphonomical history of the specimens. Based in the biogenicity criteria investigated at the nanoscale, we could not attest the biogenicity of the structures described in the Barberton Greenstone Belt, but we offered new possible interpretations of biological and biotic origins for the formation of these structures. The results represent significative advances for the comprehension of fossilized microorganisms and add important contribution for the assessment of biogenicity through a robust combination of morphological and geochemical 3D information from the nano to the micron-scale.Microfósseis Pré-Cambrianos são estruturas difíceis de serem investigadas por técnicas de imagem convencionais devido ao seu pequeno tamanho, composição geoquímica e por serem relativamente raros no registro geológico, o que limita o uso de técnicas destrutivas. Um problema recorrente no estudo dessas primeiras formas de vida é em se atestar sua biogenicidade uma vez que estruturas formadas abioticamente podem difíceis de serem distinguidas de células fossilizadas de simples morfologia. A busca de novos métodos analíticos para contribuir na avaliação dessas estruturas é de grande importância para o desenvolvimento da área de paleobiologia Pré-Cambriana. Neste trabalho, a técnica de imagem de raios X coerente de Tomografia Pticográfica de Raios X foi explorada para investigar microfósseis das Formações Gunflint e Draken, e estruturas controversas descritas como bactérias fósseis das Formações Hoogenoeg e Kromberg de Barberton Greenstone Belt. Os microfósseis foram imageados em 3D com resolução micrométrica e contraste quantitativo por densidade eletrônica, o que possibilitou a quantificação da densidade das estruturas. As imagens tomográficas forneceram informação sobre a morfologia e composição geoquímica dos espécimes em nano-escala e dentro de um contexto de micro-escala. Os dados morfológicos permitiram distinguir a distribuição 3D de querogênio, os quais revelaram um novo padrão de preservação e traços de alterações tafonômicas para espécimes da Formação Gunflint, e detalhes de organização ultra-estrutural preservados em paredes celulares de espécime da Formação Draken. A quantificação de densidade forneceu evidências complementares, como a discriminação do estado de maturação do querogênio e identificação de minerais, fornecendo também uma visão da história tafonômica dos espécimes. Baseados nos critérios de biogenicidade em nanoescala, não foi possível atestar a biogenicidade das estruturas de Barberton Greenstone Belt, mas novas possíveis interpretações de origem biológica e abiótica para essas estruturas foram levantadas. Os resultados obtidos fornecem avanços significativos na compreensão de micro-organismos fósseis e adiciona uma importante contribuição para a investigação da biogenicidade através de uma robusta combinação de informação morfológica e geoquímica em 3D.Biblioteca Digitais de Teses e Dissertações da USPGalante, DouglasPeres, Lara Maldanis Cerqueira2019-10-03info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttps://www.teses.usp.br/teses/disponiveis/76/76132/tde-22052020-151522/reponame:Biblioteca Digital de Teses e Dissertações da USPinstname:Universidade de São Paulo (USP)instacron:USPLiberar o conteúdo para acesso público.info:eu-repo/semantics/openAccesseng2022-05-22T12:59:32Zoai:teses.usp.br:tde-22052020-151522Biblioteca Digital de Teses e Dissertaçõeshttp://www.teses.usp.br/PUBhttp://www.teses.usp.br/cgi-bin/mtd2br.plvirginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.bropendoar:27212022-05-22T12:59:32Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv 3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomography
Imageamento por raios-X em 3D de microfósseis Pré-Cambrianos: avaliando a biogenicidade na nanoescala com Tomografia Pticográfica de Raios-X
title 3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomography
spellingShingle 3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomography
Peres, Lara Maldanis Cerqueira
Biogenicidade
Biogenicity
Microfósseis pré-cambrianos
Paleobiologia
Paleobiology
Precambrian microfossils
Ptychographic X-ray computed tomography
Tomografia pticográfica de Raios X
title_short 3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomography
title_full 3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomography
title_fullStr 3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomography
title_full_unstemmed 3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomography
title_sort 3D X-ray imaging of Precambrian microfossils: evaluating biogenicity at the nanoscale with ptychographic X-ray computed tomography
author Peres, Lara Maldanis Cerqueira
author_facet Peres, Lara Maldanis Cerqueira
author_role author
dc.contributor.none.fl_str_mv Galante, Douglas
dc.contributor.author.fl_str_mv Peres, Lara Maldanis Cerqueira
dc.subject.por.fl_str_mv Biogenicidade
Biogenicity
Microfósseis pré-cambrianos
Paleobiologia
Paleobiology
Precambrian microfossils
Ptychographic X-ray computed tomography
Tomografia pticográfica de Raios X
topic Biogenicidade
Biogenicity
Microfósseis pré-cambrianos
Paleobiologia
Paleobiology
Precambrian microfossils
Ptychographic X-ray computed tomography
Tomografia pticográfica de Raios X
description Precambrian microfossils are structures difficult to be investigated by means of conventional imaging approaches due to their small size, geochemical composition and relative scarcity that limits the use of destructive methods. One recurrent problem in the study of these earliest life forms relies on attesting their biogenicity given that structures formed abiotically can strongly resemble fossilized cells of simple morphology. The search of novel analytical methods for contributing to the evaluation of these ancient structures if of great importance for the development of the field of Precambrian paleobiology. In this work, the coherent X-ray imaging approach of ptychographic X-ray computed tomography is explored for assessing bona fide microfossils from the Gunflint and Draken Formations, and early Archean controversial structures described as fossil bacteria from the Hoogenoeg and Kromberg Formations of the Barberton Greenstone Belt. The microfossils were imaged non-destructively in 3D with nanometric resolution and quantitative electron density contrast, which allowed the estimation of mass density of the materials. The tomographic images provided information on both the morphology and geochemical composition of the specimens at the nanoscale within a microscale context. From the morphological data, it was possible to distinguish the 3D distribution of kerogenous material, which revealed a novel preservation pattern and traces of taphonomical alterations for filaments of Gunflint Formation, and ultrastructural details preserved in cell walls of specimen from Draken Formation. The mass density quantification provided supporting evidences, such as the discrimination of kerogen maturation states and identification of minerals, providing also a picture of the taphonomical history of the specimens. Based in the biogenicity criteria investigated at the nanoscale, we could not attest the biogenicity of the structures described in the Barberton Greenstone Belt, but we offered new possible interpretations of biological and biotic origins for the formation of these structures. The results represent significative advances for the comprehension of fossilized microorganisms and add important contribution for the assessment of biogenicity through a robust combination of morphological and geochemical 3D information from the nano to the micron-scale.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-03
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
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url https://www.teses.usp.br/teses/disponiveis/76/76132/tde-22052020-151522/
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv
dc.rights.driver.fl_str_mv Liberar o conteúdo para acesso público.
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Liberar o conteúdo para acesso público.
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
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dc.publisher.none.fl_str_mv Biblioteca Digitais de Teses e Dissertações da USP
publisher.none.fl_str_mv Biblioteca Digitais de Teses e Dissertações da USP
dc.source.none.fl_str_mv
reponame:Biblioteca Digital de Teses e Dissertações da USP
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Biblioteca Digital de Teses e Dissertações da USP
collection Biblioteca Digital de Teses e Dissertações da USP
repository.name.fl_str_mv Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)
repository.mail.fl_str_mv virginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.br
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